RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 USP44Q9H0E7 712 aa17.73■□□□□ 0.43
DDX11-228ENST00000545115 IQSEC3Q9UPP2 1182 aaPredicted RBP17.73■□□□□ 0.43
DDX11-228ENST00000545115 LAMB1P07942 1786 aa17.73■□□□□ 0.43
DDX11-228ENST00000545115 IGF2BP3O00425 579 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDX11-228ENST00000545115 TNNI2P48788 182 aa17.72■□□□□ 0.43
DDX11-228ENST00000545115 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
DDX11-228ENST00000545115 CHAF1AQ13111 956 aaPredicted RBP17.72■□□□□ 0.43
DDX11-228ENST00000545115 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
DDX11-228ENST00000545115 FBXO46Q6PJ61 603 aaPredicted RBP17.72■□□□□ 0.43
DDX11-228ENST00000545115 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
DDX11-228ENST00000545115 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
DDX11-228ENST00000545115 HDLBPQ00341 1268 aaKnown RBP17.71■□□□□ 0.43
DDX11-228ENST00000545115 TEPSINQ96N21 525 aa17.71■□□□□ 0.43
DDX11-228ENST00000545115 TCP10L2B9ZVM9 353 aa17.7■□□□□ 0.42
DDX11-228ENST00000545115 IFIT1P09914 478 aaKnown RBP17.7■□□□□ 0.42
DDX11-228ENST00000545115 GJA5P36382 358 aa17.7■□□□□ 0.42
DDX11-228ENST00000545115 BCAMP50895 628 aa17.7■□□□□ 0.42
DDX11-228ENST00000545115 PUM3Q15397 648 aaKnown RBP17.7■□□□□ 0.42
DDX11-228ENST00000545115 GRIK5Q16478 980 aa17.7■□□□□ 0.42
DDX11-228ENST00000545115 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
DDX11-228ENST00000545115 TEKT1Q969V4 418 aa17.7■□□□□ 0.42
DDX11-228ENST00000545115 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
DDX11-228ENST00000545115 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
DDX11-228ENST00000545115 OPTNQ96CV9 577 aa17.69■□□□□ 0.42
DDX11-228ENST00000545115 ELP3Q9H9T3 547 aa17.69■□□□□ 0.42
DDX11-228ENST00000545115 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
DDX11-228ENST00000545115 OTOFQ9HC10 1997 aa17.69■□□□□ 0.42
DDX11-228ENST00000545115 MAST3O60307 1309 aa17.69■□□□□ 0.42
DDX11-228ENST00000545115 TESPA1A2RU30 521 aaPredicted RBP17.68■□□□□ 0.42
DDX11-228ENST00000545115 FGFR2P21802 821 aa17.68■□□□□ 0.42
DDX11-228ENST00000545115 SUGT1Q9Y2Z0 365 aa17.68■□□□□ 0.42
DDX11-228ENST00000545115 EYA2O00167 538 aa17.67■□□□□ 0.42
DDX11-228ENST00000545115 SLC5A1P13866 664 aa17.67■□□□□ 0.42
DDX11-228ENST00000545115 RFX5P48382 616 aaPredicted RBP17.67■□□□□ 0.42
DDX11-228ENST00000545115 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.67■□□□□ 0.42
DDX11-228ENST00000545115 CDCA7LQ96GN5 454 aa17.67■□□□□ 0.42
DDX11-228ENST00000545115 ZDHHC15Q96MV8 337 aa17.67■□□□□ 0.42
DDX11-228ENST00000545115 MRIQ9BWK5 157 aa17.67■□□□□ 0.42
DDX11-228ENST00000545115 TMOD2Q9NZR1 351 aa17.67■□□□□ 0.42
DDX11-228ENST00000545115 TRIM17Q9Y577 477 aa17.67■□□□□ 0.42
DDX11-228ENST00000545115 SLC34A2O95436 690 aa17.66■□□□□ 0.42
DDX11-228ENST00000545115 CT47B1P0C2W7 299 aaPredicted RBP17.66■□□□□ 0.42
DDX11-228ENST00000545115 CRHR2Q13324 411 aa17.66■□□□□ 0.42
DDX11-228ENST00000545115 VGLL4Q14135 290 aa17.66■□□□□ 0.42
DDX11-228ENST00000545115 OTOP1Q7RTM1 612 aa17.66■□□□□ 0.42
DDX11-228ENST00000545115 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.66■□□□□ 0.42
DDX11-228ENST00000545115 LPIN2Q92539 896 aa17.66■□□□□ 0.42
DDX11-228ENST00000545115 PTPN18Q99952 460 aa17.66■□□□□ 0.42
DDX11-228ENST00000545115 CSADQ9Y600 493 aa17.66■□□□□ 0.42
DDX11-228ENST00000545115 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
DDX11-228ENST00000545115 CACNB3P54284 484 aa17.65■□□□□ 0.42
DDX11-228ENST00000545115 MAP3K9P80192 1104 aa17.65■□□□□ 0.42
DDX11-228ENST00000545115 ERO1AQ96HE7 468 aa17.65■□□□□ 0.42
DDX11-228ENST00000545115 MS4A4AQ96JQ5 239 aa17.65■□□□□ 0.42
DDX11-228ENST00000545115 PDE4DIPQ5VU43 2346 aa17.65■□□□□ 0.42
DDX11-228ENST00000545115 GTF2A2P52657 109 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 FKBP1CQ5VVH2 108 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 APOBEC3HQ6NTF7 200 aaKnown RBP17.64■□□□□ 0.41
DDX11-228ENST00000545115 HHIPL2Q6UWX4 724 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 FAM83AQ86UY5 434 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 TRMT2AQ8IZ69 625 aaKnown RBP17.64■□□□□ 0.41
DDX11-228ENST00000545115 WDR66Q8TBY9 1149 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 HOOK2Q96ED9 719 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 FBXO3Q9UK99 471 aa17.64■□□□□ 0.41
DDX11-228ENST00000545115 RPAP1Q9BWH6 1393 aaPredicted RBP17.64■□□□□ 0.41
DDX11-228ENST00000545115 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
DDX11-228ENST00000545115 CCL15-CCL14A0A0B4J2E2 113 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 SPDYE5A6NIY4 337 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 CIAO1O76071 339 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 SP3Q02447 781 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 CCL15Q16663 113 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 CD99L2Q8TCZ2 262 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 BRI3BPQ8WY22 251 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 OTUD5Q96G74 571 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 WRNIP1Q96S55 665 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 SIL1Q9H173 461 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 NOB1Q9ULX3 412 aaKnown RBP17.62■□□□□ 0.41
DDX11-228ENST00000545115 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
DDX11-228ENST00000545115 TNRC18O15417 2968 aaPredicted RBP17.61■□□□□ 0.41
DDX11-228ENST00000545115 TAF1CQ15572 869 aaPredicted RBP17.61■□□□□ 0.41
DDX11-228ENST00000545115 ATP2B3Q16720 1220 aa17.61■□□□□ 0.41
DDX11-228ENST00000545115 DCAF15Q66K64 600 aa17.61■□□□□ 0.41
DDX11-228ENST00000545115 API5Q9BZZ5 524 aaKnown RBP17.61■□□□□ 0.41
DDX11-228ENST00000545115 CEP126Q9P2H0 1117 aa17.61■□□□□ 0.41
DDX11-228ENST00000545115 PTPN22Q9Y2R2 807 aa17.61■□□□□ 0.41
DDX11-228ENST00000545115 MYH13Q9UKX3 1938 aa17.6■□□□□ 0.41
DDX11-228ENST00000545115 INTS3Q68E01 1043 aaKnown RBP17.6■□□□□ 0.41
DDX11-228ENST00000545115 ERO1BQ86YB8 467 aa17.6■□□□□ 0.41
DDX11-228ENST00000545115 EFCC1Q9HA90 598 aa17.6■□□□□ 0.41
DDX11-228ENST00000545115 ZFYVE28Q9HCC9 887 aa17.6■□□□□ 0.41
DDX11-228ENST00000545115 GNL3LQ9NVN8 582 aaKnown RBP17.6■□□□□ 0.41
DDX11-228ENST00000545115 SNCAIPQ9Y6H5 919 aa17.6■□□□□ 0.41
DDX11-228ENST00000545115 IL15P40933 162 aaPredicted RBP17.59■□□□□ 0.41
DDX11-228ENST00000545115 PRPF38BQ5VTL8 546 aaKnown RBP17.59■□□□□ 0.41
DDX11-228ENST00000545115 FAM43AQ8N2R8 423 aa17.59■□□□□ 0.41
DDX11-228ENST00000545115 DAGLAQ9Y4D2 1042 aa17.59■□□□□ 0.41
DDX11-228ENST00000545115 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
DDX11-228ENST00000545115 CETPP11597 493 aa17.58■□□□□ 0.4
DDX11-228ENST00000545115 PRDX5P30044 214 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms