RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 ZBTB38Q8NAP3 1195 aaPredicted RBP9.33□□□□□ -0.92
CIT-215ENST00000544800 MTMR14Q8NCE2 650 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 SLC39A7Q92504 469 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 KHSRPQ92945 711 aaKnown RBP eCLIP9.33□□□□□ -0.92
CIT-215ENST00000544800 CARD11Q9BXL7 1154 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 ZNF576Q9H609 170 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 BMP2KQ9NSY1 1161 aaPredicted RBP9.33□□□□□ -0.92
CIT-215ENST00000544800 GABRQQ9UN88 632 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 PPP2R3BQ9Y5P8 575 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 WDFY4Q6ZS81 3184 aa9.33□□□□□ -0.92
CIT-215ENST00000544800 ZFHX2Q9C0A1 2572 aaPredicted RBP9.33□□□□□ -0.92
CIT-215ENST00000544800 TCF20Q9UGU0 1960 aaKnown RBP9.33□□□□□ -0.92
CIT-215ENST00000544800 COL1A1P02452 1464 aaPredicted RBP9.33□□□□□ -0.92
CIT-215ENST00000544800 USP17L3A6NCW0 530 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 USP17L4A6NCW7 530 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 BTBD19C9JJ37 291 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 IRF5Q13568 498 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 LRRC26Q2I0M4 334 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 USP17L1Q7RTZ2 530 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 PODNQ7Z5L7 613 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 TBC1D16Q8TBP0 767 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 ANKRD11Q6UB99 2663 aaPredicted RBP9.32□□□□□ -0.92
CIT-215ENST00000544800 CHD6Q8TD26 2715 aa9.32□□□□□ -0.92
CIT-215ENST00000544800 C5orf42Q9H799 3197 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 SASH1O94885 1247 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 C7P10643 843 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 FLT3LGP49771 235 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 GPSM2P81274 684 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 ZNF34Q8IZ26 560 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 PHOX2BQ99453 314 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 PRKAG2Q9UGJ0 569 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 OGDHLQ9ULD0 1010 aa9.31□□□□□ -0.92
CIT-215ENST00000544800 ZFHX4Q86UP3 3567 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 SNRPA1P09661 255 aaKnown RBP9.3□□□□□ -0.92
CIT-215ENST00000544800 COL6A1P12109 1028 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 KCNQ1P51787 676 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 PARP10Q53GL7 1025 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 CARD14Q9BXL6 1004 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 KIF20BQ96Q89 1820 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 TPRP12270 2363 aaKnown RBP9.3□□□□□ -0.92
CIT-215ENST00000544800 XIRP2A4UGR9 3374 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 MAP3K15Q6ZN16 1313 aa9.3□□□□□ -0.92
CIT-215ENST00000544800 U2AF1L5P0DN76 240 aaPredicted RBP9.29□□□□□ -0.92
CIT-215ENST00000544800 DNAJB2P25686 324 aa9.29□□□□□ -0.92
CIT-215ENST00000544800 U2AF1Q01081 240 aaKnown RBP eCLIP9.29□□□□□ -0.92
CIT-215ENST00000544800 TFF2Q03403 129 aa9.29□□□□□ -0.92
CIT-215ENST00000544800 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
CIT-215ENST00000544800 TESK2Q96S53 571 aa9.29□□□□□ -0.92
CIT-215ENST00000544800 UTP14AQ9BVJ6 771 aaKnown RBP9.29□□□□□ -0.92
CIT-215ENST00000544800 DDX60Q8IY21 1712 aaKnown RBP9.28□□□□□ -0.92
CIT-215ENST00000544800 NUBP1P53384 320 aa9.28□□□□□ -0.92
CIT-215ENST00000544800 COL9A2Q14055 689 aaPredicted RBP9.28□□□□□ -0.92
CIT-215ENST00000544800 MTHFSDQ2M296 383 aaKnown RBP9.28□□□□□ -0.92
CIT-215ENST00000544800 NBPF12Q5TAG4 269 aaPredicted RBP9.28□□□□□ -0.92
CIT-215ENST00000544800 ZBED3Q96IU2 234 aaPredicted RBP9.28□□□□□ -0.92
CIT-215ENST00000544800 HMX1Q9NP08 348 aaPredicted RBP9.28□□□□□ -0.92
CIT-215ENST00000544800 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.27□□□□□ -0.93
CIT-215ENST00000544800 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.27□□□□□ -0.93
CIT-215ENST00000544800 ERC2O15083 957 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 KCNQ3O43525 872 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 IGFBP4P22692 258 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 SNAPC2Q13487 334 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.27□□□□□ -0.93
CIT-215ENST00000544800 TIFAQ96CG3 184 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 PRDM12Q9H4Q4 367 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 PODXL2Q9NZ53 605 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 MYO3BQ8WXR4 1341 aa9.27□□□□□ -0.93
CIT-215ENST00000544800 BTBD11A6QL63 1104 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 TLL1O43897 1013 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 GFRA3O60609 400 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 HCLS1P14317 486 aaPredicted RBP9.26□□□□□ -0.93
CIT-215ENST00000544800 MAP3K9P80192 1104 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 ADGRE1Q14246 886 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 GIGYF2Q6Y7W6 1299 aaKnown RBP9.26□□□□□ -0.93
CIT-215ENST00000544800 KIF6Q6ZMV9 814 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 NGEFQ8N5V2 710 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 IL17REQ8NFR9 667 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 FBXO3Q9UK99 471 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 TRANK1O15050 2925 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 ZNF804BA4D1E1 1349 aa9.26□□□□□ -0.93
CIT-215ENST00000544800 MYO9BQ13459 2157 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 UFL1O94874 794 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 BCRP11274 1271 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 ALADP13716 330 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 VGLL4Q14135 290 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 DACT2Q5SW24 774 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 ANKRD23Q86SG2 305 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 RNPC3Q96LT9 517 aaKnown RBP9.25□□□□□ -0.93
CIT-215ENST00000544800 PCDHB13Q9Y5F0 798 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 CSADQ9Y600 493 aa9.25□□□□□ -0.93
CIT-215ENST00000544800 DDX60LQ5H9U9 1706 aaKnown RBP9.25□□□□□ -0.93
CIT-215ENST00000544800 SETXQ7Z333 2677 aaKnown RBP9.24□□□□□ -0.93
CIT-215ENST00000544800 SPDYE5A6NIY4 337 aa9.24□□□□□ -0.93
CIT-215ENST00000544800 TTLL13PA6NNM8 815 aa9.24□□□□□ -0.93
CIT-215ENST00000544800 PDHXO00330 501 aa9.24□□□□□ -0.93
CIT-215ENST00000544800 HMGCRP04035 888 aa9.24□□□□□ -0.93
CIT-215ENST00000544800 CELF1Q92879 486 aaKnown RBP9.24□□□□□ -0.93
CIT-215ENST00000544800 ZBTB3Q9H5J0 574 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms