RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	WNT8B	Q93098	351 aa		7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	SRA1	Q9HD15	236 aa	Known RBP	7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639	TTF2	Q9UNY4	1162 aa	Known RBP	7.13	□□□□□ -1.27
RAP1B-231	ENST00000544639		E9PSI1	815 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	SOX1	O00570	391 aa	Predicted RBP	7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	TM4SF5	O14894	197 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	FSCN2	O14926	492 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	DEAF1	O75398	565 aa	Predicted RBP	7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	FBXO24	O75426	580 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	H2AFB1	P0C5Y9	115 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	H2AFB2	P0C5Z0	115 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	MBTPS1	Q14703	1052 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	TAF1C	Q15572	869 aa	Predicted RBP	7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	HGSNAT	Q68CP4	663 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	MAP4K3	Q8IVH8	894 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	SOX17	Q9H6I2	414 aa	Predicted RBP	7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	SEC31B	Q9NQW1	1179 aa		7.12	□□□□□ -1.27
RAP1B-231	ENST00000544639	TPTE2	Q6XPS3	522 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	TXNRD3	Q86VQ6	643 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	FMR1NB	Q8N0W7	255 aa	Predicted RBP	7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	TMEM87A	Q8NBN3	555 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	GALNT11	Q8NCW6	608 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	SLC7A3	Q8WY07	619 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	CARD10	Q9BWT7	1032 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	CEP44	Q9C0F1	390 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	OSGEP	Q9NPF4	335 aa		7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	GPN3	Q9UHW5	284 aa	Predicted RBP	7.11	□□□□□ -1.27
RAP1B-231	ENST00000544639	ENC1	O14682	589 aa		7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	C19orf57	Q0VDD7	668 aa		7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	NPM2	Q86SE8	214 aa	Known RBP	7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	FBXO11	Q86XK2	927 aa		7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	KLHL23	Q8NBE8	558 aa		7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	NECAB3	Q96P71	396 aa	Predicted RBP	7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	KRTAP4-8	Q9BYQ9	185 aa		7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	TMEM39A	Q9NV64	488 aa		7.1	□□□□□ -1.27
RAP1B-231	ENST00000544639	DLL1	O00548	723 aa		7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	SCAMP3	O14828	347 aa	Known RBP	7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	CELA3A	P09093	270 aa		7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	ARL4D	P49703	201 aa		7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	ZNF157	P51786	506 aa	Predicted RBP	7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	SV2B	Q7L1I2	683 aa		7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	KLHDC7B	Q96G42	594 aa		7.09	□□□□□ -1.27
RAP1B-231	ENST00000544639	GSTM4	Q03013	218 aa		7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	PPP2R3A	Q06190	1150 aa		7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	CCDC85B	Q15834	202 aa	Predicted RBP	7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	PRSS36	Q5K4E3	855 aa		7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	DCAF11	Q8TEB1	546 aa		7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	TRIM56	Q9BRZ2	755 aa	Known RBP	7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	NOC4L	Q9BVI4	516 aa	Known RBP	7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	NRSN2	Q9GZP1	204 aa		7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	METTL5	Q9NRN9	209 aa	Known RBP	7.08	□□□□□ -1.28
RAP1B-231	ENST00000544639	EIF4EBP3	O60516	100 aa	Predicted RBP	7.07	□□□□□ -1.28
RAP1B-231	ENST00000544639	ADAM11	O75078	769 aa		7.07	□□□□□ -1.28
RAP1B-231	ENST00000544639	PAGE1	O75459	146 aa		7.07	□□□□□ -1.28
RAP1B-231	ENST00000544639	FANCC	Q00597	558 aa		7.07	□□□□□ -1.28
RAP1B-231	ENST00000544639	DDX54	Q8TDD1	881 aa	Known RBP	7.07	□□□□□ -1.28
RAP1B-231	ENST00000544639	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.07	□□□□□ -1.28
RAP1B-231	ENST00000544639	SCO2	A0A1W2PP80	73 aa		7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	DDX3Y	O15523	660 aa	Known RBP	7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	CD68	P34810	354 aa	Predicted RBP	7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	ZNF76	P36508	570 aa		7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	AP3B2	Q13367	1082 aa		7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	ARTN	Q5T4W7	220 aa		7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	SHISA2	Q6UWI4	295 aa		7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	IGSF5	Q9NSI5	407 aa		7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	KCNK4	Q9NYG8	393 aa		7.06	□□□□□ -1.28
RAP1B-231	ENST00000544639	TCF3	P15923	654 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	NME2	P22392	152 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	NLRP12	P59046	1061 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	ERMP1	Q7Z2K6	904 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	SULF2	Q8IWU5	870 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	STK35	Q8TDR2	534 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	ZFP64	Q9NPA5	681 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	USP21	Q9UK80	565 aa		7.05	□□□□□ -1.28
RAP1B-231	ENST00000544639	CYP11A1	P05108	521 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	BMP6	P22004	513 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	LIG3	P49916	1009 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	HDLBP	Q00341	1268 aa	Known RBP	7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	PCNX4	Q63HM2	1172 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	HS2ST1	Q7LGA3	356 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	PDZD3	Q86UT5	571 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	METTL16	Q86W50	562 aa	Known RBP	7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	RNF34	Q969K3	372 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	PSMG3-AS1	Q96PY0	264 aa		7.04	□□□□□ -1.28
RAP1B-231	ENST00000544639	LOC100289279	A0A1B0GTE1	492 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	WISP1	O95388	367 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	RLBP1	P12271	317 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	ARNT	P27540	789 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	POU4F3	Q15319	338 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	MAP3K11	Q16584	847 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	RASIP1	Q5U651	963 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	TTBK2	Q6IQ55	1244 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	IGF2-AS	Q6U949	168 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	UBASH3B	Q8TF42	649 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	TP53INP1	Q96A56	240 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	RSRP1	Q9BUV0	290 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	USP26	Q9BXU7	913 aa		7.03	□□□□□ -1.28
RAP1B-231	ENST00000544639	GGT7	Q9UJ14	662 aa		7.03	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms