RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 FAM98CQ17RN3 349 aaKnown RBP14.52□□□□□ -0.08
CHD4-211ENST00000544484 BRAPQ7Z569 592 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 MPHOSPH6Q99547 160 aaKnown RBP14.52□□□□□ -0.08
CHD4-211ENST00000544484 PKD2L1Q9P0L9 805 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 GCOM1H8Y6P7 765 aaPredicted RBP14.52□□□□□ -0.08
CHD4-211ENST00000544484 MYZAPP0CAP1 466 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.08
CHD4-211ENST00000544484 SYNCQ9H7C4 482 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 SNX14Q9Y5W7 946 aa14.52□□□□□ -0.08
CHD4-211ENST00000544484 EYA3Q99504 573 aa14.52□□□□□ -0.09
CHD4-211ENST00000544484 PAXBP1Q9Y5B6 917 aa14.52□□□□□ -0.09
CHD4-211ENST00000544484 TMEM87AQ8NBN3 555 aa14.52□□□□□ -0.09
CHD4-211ENST00000544484 PARP1P09874 1014 aaKnown RBP14.51□□□□□ -0.09
CHD4-211ENST00000544484 RNF187Q5TA31 235 aaPredicted RBP14.51□□□□□ -0.09
CHD4-211ENST00000544484 EHBP1Q8NDI1 1231 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 POTEB2H3BUK9 544 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 GCKRQ14397 625 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 MYL10Q9BUA6 226 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 FAM13AO94988 1023 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 GTF2F1P35269 517 aaKnown RBP eCLIP14.51□□□□□ -0.092e-6■□□□□ 10.8
CHD4-211ENST00000544484 UBXN1Q04323 297 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 KIAA0753Q2KHM9 967 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 RBM17Q96I25 401 aaKnown RBP14.51□□□□□ -0.09
CHD4-211ENST00000544484 DNMT1P26358 1616 aaKnown RBP14.51□□□□□ -0.09
CHD4-211ENST00000544484 CCDC172P0C7W6 258 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 TTC6Q86TZ1 520 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 FAM107BQ9H098 131 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 GJC1P36383 396 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 KARSQ15046 597 aaKnown RBP14.51□□□□□ -0.09
CHD4-211ENST00000544484 PARP10Q53GL7 1025 aa14.51□□□□□ -0.09
CHD4-211ENST00000544484 KCNQ3O43525 872 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.09
CHD4-211ENST00000544484 APPBP2Q92624 585 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 IFI16Q16666 785 aaKnown RBP14.5□□□□□ -0.09
CHD4-211ENST00000544484 EDC3Q96F86 508 aaKnown RBP14.5□□□□□ -0.09
CHD4-211ENST00000544484 HOXB7P09629 217 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 V9GY48 417 aaPredicted RBP14.5□□□□□ -0.09
CHD4-211ENST00000544484 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
CHD4-211ENST00000544484 DPH6Q7L8W6 267 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 IQUBQ8NA54 791 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 DISP1Q96F81 1524 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 MAST1Q9Y2H9 1570 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 SGSM2O43147 1006 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 EIF4A1P60842 406 aaKnown RBP14.5□□□□□ -0.09
CHD4-211ENST00000544484 VTI1AQ96AJ9 217 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 LZTFL1Q9NQ48 299 aa14.5□□□□□ -0.09
CHD4-211ENST00000544484 CTDSPL2Q05D32 466 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 BABAM1Q9NWV8 329 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 ATP7AQ04656 1500 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 CTAGE15A4D2H0 777 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 CTAGE8P0CG41 777 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 SMC1AQ14683 1233 aaKnown RBP14.49□□□□□ -0.09
CHD4-211ENST00000544484 CTAGE6Q86UF2 777 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 FCHSD1Q86WN1 690 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 CTAGE4Q8IX94 777 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 ZAP70P43403 619 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 USP37Q86T82 979 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 PRIMPOLQ96LW4 560 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 CCDC42Q96M95 316 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 RBM28Q9NW13 759 aaKnown RBP14.49□□□□□ -0.09
CHD4-211ENST00000544484 TMEM110-MUSTN1A8MSY1 372 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 ACTN2P35609 894 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 ZKSCAN5Q9Y2L8 839 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 GJA3Q9Y6H8 435 aa14.49□□□□□ -0.09
CHD4-211ENST00000544484 CCDC175P0C221 793 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 POLD1P28340 1107 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 ZYXQ15942 572 aaKnown RBP14.48□□□□□ -0.09
CHD4-211ENST00000544484 PIK3AP1Q6ZUJ8 805 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 GUCA1BQ9UMX6 200 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 LMAN1P49257 510 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 KBTBD3Q8NAB2 608 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 PSMD1Q99460 953 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 CCDC87Q9NVE4 849 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 ANGEL1Q9UNK9 670 aaKnown RBP14.48□□□□□ -0.09
CHD4-211ENST00000544484 MCM6Q14566 821 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 HS2ST1Q7LGA3 356 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 CAPZA3Q96KX2 299 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 ATP10AO60312 1499 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 FSD2A1L4K1 749 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 UIMC1Q96RL1 719 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 MAPK8IP1Q9UQF2 711 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 PTPRTO14522 1441 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 NPC1L1Q9UHC9 1359 aa14.48□□□□□ -0.09
CHD4-211ENST00000544484 CCT6AP40227 531 aaKnown RBP14.47□□□□□ -0.09
CHD4-211ENST00000544484 TERF1P54274 439 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 TTC16Q8NEE8 873 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 PHKBQ93100 1093 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 BACH1O14867 736 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 TACC1O75410 805 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 GGA1Q9UJY5 639 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 LTKP29376 864 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 KIF5AQ12840 1032 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 BMS1Q14692 1282 aaKnown RBP14.47□□□□□ -0.09
CHD4-211ENST00000544484 ZFP91Q96JP5 570 aaPredicted RBP14.47□□□□□ -0.09
CHD4-211ENST00000544484 NEK11Q8NG66 645 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 TMEM87BQ96K49 555 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 hCG_1642624A0A1W2PR95 340 aa14.47□□□□□ -0.09
CHD4-211ENST00000544484 BICDL2A1A5D9 508 aa14.46□□□□□ -0.09
CHD4-211ENST00000544484 CKAP4Q07065 602 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms