RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 MROH5Q6ZUA9 1318 aa14.31□□□□□ -0.12
LRTOMT-221ENST00000544409 GOLGA8BA8MQT2 603 aa14.31□□□□□ -0.12
LRTOMT-221ENST00000544409 RIOK3O14730 519 aaKnown RBP14.31□□□□□ -0.12
LRTOMT-221ENST00000544409 UBE3CQ15386 1083 aa14.31□□□□□ -0.12
LRTOMT-221ENST00000544409 AK7Q96M32 723 aa14.31□□□□□ -0.12
LRTOMT-221ENST00000544409 PIH1D3Q9NQM4 214 aaKnown RBP14.31□□□□□ -0.12
LRTOMT-221ENST00000544409 LRP5O75197 1615 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 GOLGA6L6A8MZA4 724 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 PPFIA3O75145 1194 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 IDH1O75874 414 aaKnown RBP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 FDPSP14324 419 aaKnown RBP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 ARID4AP29374 1257 aaPredicted RBP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 TRDNQ13061 729 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 PUM3Q15397 648 aaKnown RBP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 CCDC102BQ68D86 513 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 CCAR1Q8IX12 1150 aaKnown RBP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 CBX8Q9HC52 389 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 COL22A1Q8NFW1 1626 aaPredicted RBP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 MYO5AQ9Y4I1 1855 aaKnown RBP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 ARAP2Q8WZ64 1704 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 ANTXR2P58335 489 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 LUZP1Q86V48 1076 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 LPIN2Q92539 896 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 CTAGE5O15320 804 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 PHKA1P46020 1223 aa14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 FTOQ9C0B1 505 aaKnown RBP eCLIP14.3□□□□□ -0.12
LRTOMT-221ENST00000544409 CPLX1O14810 134 aa14.29□□□□□ -0.12
LRTOMT-221ENST00000544409 CAVIN2O95810 425 aa14.29□□□□□ -0.12
LRTOMT-221ENST00000544409 C8orf76Q96K31 380 aa14.29□□□□□ -0.12
LRTOMT-221ENST00000544409 ZNF532Q9HCE3 1301 aa14.29□□□□□ -0.12
LRTOMT-221ENST00000544409 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
LRTOMT-221ENST00000544409 ROBO1Q9Y6N7 1651 aa14.29□□□□□ -0.12
LRTOMT-221ENST00000544409 APPP05067 770 aa14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 SLC5A1P13866 664 aa14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 PDE6AP16499 860 aa14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 ILDR1Q86SU0 546 aaPredicted RBP14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 CDCA7Q9BWT1 371 aaPredicted RBP14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 FGFR2P21802 821 aa14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 EIF5P55010 431 aaKnown RBP14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 TDRD7Q8NHU6 1098 aaKnown RBP14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 ME1P48163 572 aa14.28□□□□□ -0.12
LRTOMT-221ENST00000544409 AHDC1Q5TGY3 1603 aaPredicted RBP14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 ZNF165P49910 485 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 SPC24Q8NBT2 197 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 HELBQ8NG08 1087 aaPredicted RBP14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 DNAJC25Q9H1X3 360 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 GOLPH3LQ9H4A5 285 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 CCDC87Q9NVE4 849 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 RTEL1Q9NZ71 1219 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 C4AP0C0L4 1744 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 C4BP0C0L5 1744 aa14.27□□□□□ -0.12
LRTOMT-221ENST00000544409 KINO60870 393 aaKnown RBP14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 SUSD4Q5VX71 490 aa14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 ANKRD7Q92527 254 aa14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 AIDAQ96BJ3 306 aa14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 NBPF3Q9H094 633 aa14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 OGFRQ9NZT2 677 aa14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 WWC3Q9ULE0 1092 aa14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 SLIT2O94813 1529 aa14.27□□□□□ -0.13
LRTOMT-221ENST00000544409 A0A0G2JS52 829 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 FAM160A1Q05DH4 1040 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 TBC1D10CQ8IV04 446 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 FBXO18Q8NFZ0 1043 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 UTP14AQ9BVJ6 771 aaKnown RBP14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 ANGEL1Q9UNK9 670 aaKnown RBP14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 TCRBV5S4A2TA0A5A2 114 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 INTS5Q6P9B9 1019 aaKnown RBP14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 BRAPQ7Z569 592 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 RAB11FIP4Q86YS3 637 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 FSIP1Q8NA03 581 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 FEZ1Q99689 392 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 SNW1Q13573 536 aaKnown RBP14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 OTUD7BQ6GQQ9 843 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 SPATA5Q8NB90 893 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 ZMYM6O95789 1325 aa14.26□□□□□ -0.13
LRTOMT-221ENST00000544409 DOCK2Q92608 1830 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 STK38Q15208 465 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 DDB1Q16531 1140 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 STX1AQ16623 288 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 PARP10Q53GL7 1025 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 ENGASEQ8NFI3 743 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 STRBPQ96SI9 672 aaKnown RBP14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 SH2B2O14492 632 aaPredicted RBP14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 CRKLP46109 303 aaKnown RBP14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 MAP3K12Q12852 859 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 ALX1Q15699 326 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 CYB5R4Q7L1T6 521 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 MRPS27Q92552 414 aaKnown RBP14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 SPTLC3Q9NUV7 552 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 PCDHA7Q9UN72 937 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 PHLPP1O60346 1717 aa14.25□□□□□ -0.13
LRTOMT-221ENST00000544409 CDKL5O76039 1030 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 SLFN14P0C7P3 912 aa14.24□□□□□ -0.13
LRTOMT-221ENST00000544409 SF3A1Q15459 793 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms