RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FAM205AQ6ZU69 1335 aa36.37■■■■□ 3.41
CCM2-219ENST00000544363 MBD4O95243 580 aa36.37■■■■□ 3.41
CCM2-219ENST00000544363 TSGA10IPQ3SY00 556 aa36.37■■■■□ 3.41
CCM2-219ENST00000544363 ST18O60284 1047 aa36.36■■■■□ 3.41
CCM2-219ENST00000544363 LDHBP07195 334 aaKnown RBP36.36■■■■□ 3.41
CCM2-219ENST00000544363 CCDC93Q567U6 631 aa36.36■■■■□ 3.41
CCM2-219ENST00000544363 ADGRA1Q86SQ6 560 aa36.36■■■■□ 3.41
CCM2-219ENST00000544363 SUPT20HQ8NEM7 779 aa36.36■■■■□ 3.41
CCM2-219ENST00000544363 IL27Q8NEV9 243 aa36.36■■■■□ 3.41
CCM2-219ENST00000544363 MAST2Q6P0Q8 1798 aa36.35■■■■□ 3.41
CCM2-219ENST00000544363 CD2BP2O95400 341 aaKnown RBP36.35■■■■□ 3.41
CCM2-219ENST00000544363 NEK4P51957 841 aa36.35■■■■□ 3.41
CCM2-219ENST00000544363 CCDC88AQ3V6T2 1871 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 G3V3G9 751 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 DOK7Q18PE1 504 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 DCAF8Q5TAQ9 597 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 ILDR2Q71H61 639 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 RTKN2Q8IZC4 609 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 TBC1D22AQ8WUA7 517 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 TM6SF1Q9BZW5 370 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 ARMT1Q9H993 441 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 PPP1R1BQ9UD71 204 aaPredicted RBP36.34■■■■□ 3.41
CCM2-219ENST00000544363 CTNNA3Q9UI47 895 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 MIGA1Q8NAN2 632 aa36.34■■■■□ 3.41
CCM2-219ENST00000544363 CYP21A2P08686 494 aa36.33■■■■□ 3.41
CCM2-219ENST00000544363 DZIP1Q86YF9 867 aaKnown RBP36.33■■■■□ 3.41
CCM2-219ENST00000544363 CHD4Q14839 1912 aa36.33■■■■□ 3.41
CCM2-219ENST00000544363 MAGEB6P1A0A0J9YX57 407 aa36.32■■■■□ 3.4
CCM2-219ENST00000544363 FGAP02671 866 aa36.32■■■■□ 3.4
CCM2-219ENST00000544363 ADCK5Q3MIX3 580 aa36.32■■■■□ 3.4
CCM2-219ENST00000544363 LCORLQ8N3X6 602 aa36.32■■■■□ 3.4
CCM2-219ENST00000544363 GNAT2P19087 354 aa36.31■■■■□ 3.4
CCM2-219ENST00000544363 GTF2IP78347 998 aa36.31■■■■□ 3.4
CCM2-219ENST00000544363 PODNQ7Z5L7 613 aa36.31■■■■□ 3.4
CCM2-219ENST00000544363 JAKMIP1Q96N16 626 aaKnown RBP36.31■■■■□ 3.4
CCM2-219ENST00000544363 UPF3BQ9BZI7 483 aaKnown RBP36.31■■■■□ 3.4
CCM2-219ENST00000544363 KRT32Q14532 448 aa36.3■■■■□ 3.4
CCM2-219ENST00000544363 MFSD14BQ5SR56 506 aa36.3■■■■□ 3.4
CCM2-219ENST00000544363 SOGA3Q5TF21 947 aa36.3■■■■□ 3.4
CCM2-219ENST00000544363 TAF6LQ9Y6J9 622 aa36.3■■■■□ 3.4
CCM2-219ENST00000544363 PATL2C9JE40 543 aaKnown RBP36.3■■■■□ 3.4
CCM2-219ENST00000544363 PSMA5P28066 241 aa36.3■■■■□ 3.4
CCM2-219ENST00000544363 GRIK5Q16478 980 aa36.3■■■■□ 3.4
CCM2-219ENST00000544363 DALRD3Q5D0E6 543 aaKnown RBP36.3■■■■□ 3.4
CCM2-219ENST00000544363 RIOK1Q9BRS2 568 aaKnown RBP36.3■■■■□ 3.4
CCM2-219ENST00000544363 RPAP1Q9BWH6 1393 aaPredicted RBP36.29■■■■□ 3.4
CCM2-219ENST00000544363 CASTP20810 708 aaKnown RBP36.29■■■■□ 3.4
CCM2-219ENST00000544363 KIAA2012Q0VF49 1180 aa36.29■■■■□ 3.4
CCM2-219ENST00000544363 KLHL34Q8N239 644 aa36.29■■■■□ 3.4
CCM2-219ENST00000544363 PSMD1Q99460 953 aa36.29■■■■□ 3.4
CCM2-219ENST00000544363 ZSWIM6Q9HCJ5 1215 aa36.29■■■■□ 3.4
CCM2-219ENST00000544363 APPP05067 770 aa36.28■■■■□ 3.4
CCM2-219ENST00000544363 GSTO1P78417 241 aa36.28■■■■□ 3.4
CCM2-219ENST00000544363 ALX1Q15699 326 aa36.28■■■■□ 3.4
CCM2-219ENST00000544363 TTLL5Q6EMB2 1281 aa36.28■■■■□ 3.4
CCM2-219ENST00000544363 DBNDD1Q9H9R9 158 aa36.28■■■■□ 3.4
CCM2-219ENST00000544363 K7ELQ4 463 aaPredicted RBP36.26■■■■□ 3.4
CCM2-219ENST00000544363 AOC3Q16853 763 aa36.26■■■■□ 3.4
CCM2-219ENST00000544363 SLC4A4Q9Y6R1 1079 aa36.26■■■■□ 3.4
CCM2-219ENST00000544363 BRCA1P38398 1863 aaKnown RBP36.26■■■■□ 3.4
CCM2-219ENST00000544363 IMMTQ16891 758 aaKnown RBP36.26■■■■□ 3.39
CCM2-219ENST00000544363 SPON1Q9HCB6 807 aa36.26■■■■□ 3.39
CCM2-219ENST00000544363 ZMYM6O95789 1325 aa36.26■■■■□ 3.39
CCM2-219ENST00000544363 GSG1L2A8MUP6 293 aa36.25■■■■□ 3.39
CCM2-219ENST00000544363 DYNLL1P63167 89 aaKnown RBP36.25■■■■□ 3.39
CCM2-219ENST00000544363 SUGT1Q9Y2Z0 365 aa36.25■■■■□ 3.39
CCM2-219ENST00000544363 CYP46A1Q9Y6A2 500 aa36.25■■■■□ 3.39
CCM2-219ENST00000544363 PRKAB2O43741 272 aa36.24■■■■□ 3.39
CCM2-219ENST00000544363 ECE2O60344 883 aa36.24■■■■□ 3.39
CCM2-219ENST00000544363 LDHCP07864 332 aa36.24■■■■□ 3.39
CCM2-219ENST00000544363 RUFY3Q7L099 469 aa36.24■■■■□ 3.39
CCM2-219ENST00000544363 IFNL3Q8IZI9 196 aa36.24■■■■□ 3.39
CCM2-219ENST00000544363 FBXW7Q969H0 707 aa36.24■■■■□ 3.39
CCM2-219ENST00000544363 PPIP5K2O43314 1243 aa36.23■■■■□ 3.39
CCM2-219ENST00000544363 MCM2P49736 904 aa36.23■■■■□ 3.39
CCM2-219ENST00000544363 TTC14Q96N46 770 aa36.23■■■■□ 3.39
CCM2-219ENST00000544363 EPB41L4AQ9HCS5 686 aaPredicted RBP36.23■■■■□ 3.39
CCM2-219ENST00000544363 NACAP1Q9BZK3 213 aa36.22■■■■□ 3.39
CCM2-219ENST00000544363 AATFQ9NY61 560 aaKnown RBP eCLIP36.22■■■■□ 3.39
CCM2-219ENST00000544363 ZNF213O14771 459 aa36.21■■■■□ 3.39
CCM2-219ENST00000544363 CPA1P15085 419 aa36.21■■■■□ 3.39
CCM2-219ENST00000544363 DIXDC1Q155Q3 683 aa36.21■■■■□ 3.39
CCM2-219ENST00000544363 BLOC1S2Q6QNY1 142 aa36.21■■■■□ 3.39
CCM2-219ENST00000544363 NEK1Q96PY6 1258 aa36.21■■■■□ 3.39
CCM2-219ENST00000544363 NAPBQ9H115 298 aa36.21■■■■□ 3.39
CCM2-219ENST00000544363 STOX1Q6ZVD7 989 aa36.2■■■■□ 3.39
CCM2-219ENST00000544363 VPS33BQ9H267 617 aa36.2■■■■□ 3.39
CCM2-219ENST00000544363 E7EWF7 191 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 HAND2P61296 217 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 SLF2Q8IX21 1173 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 CERS5Q8N5B7 392 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 MROH7-TTC4A0A0A0MT08 1334 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 STRIP1Q5VSL9 837 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 KCNQ5Q9NR82 932 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 PDRG1Q9NUG6 133 aa36.19■■■■□ 3.38
CCM2-219ENST00000544363 FAM163AQ96GL9 167 aaPredicted RBP36.18■■■■□ 3.38
CCM2-219ENST00000544363 RPS6KB1P23443 525 aa36.17■■■■□ 3.38
CCM2-219ENST00000544363 FKBP1AP62942 108 aaKnown RBP36.17■■■■□ 3.38
CCM2-219ENST00000544363 SDR42E1Q8WUS8 393 aa36.17■■■■□ 3.38
CCM2-219ENST00000544363 CRNKL1Q9BZJ0 848 aaKnown RBP36.17■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms