RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 ALDH1A1P00352 501 aa34.52■■■■□ 3.12
PDCD2-211ENST00000544336 CAVIN4Q5BKX8 364 aa34.52■■■■□ 3.12
PDCD2-211ENST00000544336 INHBEP58166 350 aa34.51■■■■□ 3.12
PDCD2-211ENST00000544336 USP44Q9H0E7 712 aa34.51■■■■□ 3.12
PDCD2-211ENST00000544336 IGF2BP3O00425 579 aaKnown RBP eCLIP34.5■■■■□ 3.11
PDCD2-211ENST00000544336 PDE8BO95263 885 aa34.5■■■■□ 3.11
PDCD2-211ENST00000544336 SLFN5Q08AF3 891 aa34.5■■■■□ 3.11
PDCD2-211ENST00000544336 CDAN1Q8IWY9 1227 aa34.5■■■■□ 3.11
PDCD2-211ENST00000544336 ANKRD13AQ8IZ07 590 aa34.5■■■■□ 3.11
PDCD2-211ENST00000544336 VGLL2Q8N8G2 317 aa34.5■■■■□ 3.11
PDCD2-211ENST00000544336 GJA5P36382 358 aa34.49■■■■□ 3.11
PDCD2-211ENST00000544336 UNCXA6NJT0 531 aa34.48■■■■□ 3.11
PDCD2-211ENST00000544336 BCAMP50895 628 aa34.48■■■■□ 3.11
PDCD2-211ENST00000544336 TMEM39BQ9GZU3 492 aa34.48■■■■□ 3.11
PDCD2-211ENST00000544336 ELP3Q9H9T3 547 aa34.48■■■■□ 3.11
PDCD2-211ENST00000544336 FBXO46Q6PJ61 603 aaPredicted RBP34.47■■■■□ 3.11
PDCD2-211ENST00000544336 CDCA7LQ96GN5 454 aa34.47■■■■□ 3.11
PDCD2-211ENST00000544336 TBC1D22AQ8WUA7 517 aa34.46■■■■□ 3.11
PDCD2-211ENST00000544336 TEPSINQ96N21 525 aa34.46■■■■□ 3.11
PDCD2-211ENST00000544336 TNNI2P48788 182 aa34.45■■■■□ 3.11
PDCD2-211ENST00000544336 SMC4Q9NTJ3 1288 aa34.45■■■■□ 3.11
PDCD2-211ENST00000544336 CACNB3P54284 484 aa34.44■■■■□ 3.1
PDCD2-211ENST00000544336 MYH13Q9UKX3 1938 aa34.43■■■■□ 3.1
PDCD2-211ENST00000544336 PUM3Q15397 648 aaKnown RBP34.43■■■■□ 3.1
PDCD2-211ENST00000544336 TEKT1Q969V4 418 aa34.43■■■■□ 3.1
PDCD2-211ENST00000544336 OPTNQ96CV9 577 aa34.43■■■■□ 3.1
PDCD2-211ENST00000544336 IFIT1P09914 478 aaKnown RBP34.42■■■■□ 3.1
PDCD2-211ENST00000544336 ALDH1L2Q3SY69 923 aa34.42■■■■□ 3.1
PDCD2-211ENST00000544336 OTUD7BQ6GQQ9 843 aa34.41■■■■□ 3.1
PDCD2-211ENST00000544336 FGFR2P21802 821 aa34.4■■■■□ 3.1
PDCD2-211ENST00000544336 RFX5P48382 616 aaPredicted RBP34.4■■■■□ 3.1
PDCD2-211ENST00000544336 HDLBPQ00341 1268 aaKnown RBP34.4■■■■□ 3.1
PDCD2-211ENST00000544336 CRHR2Q13324 411 aa34.4■■■■□ 3.1
PDCD2-211ENST00000544336 PPP1R3FQ6ZSY5 799 aaPredicted RBP34.4■■■■□ 3.1
PDCD2-211ENST00000544336 CNKSR2Q8WXI2 1034 aa34.4■■■■□ 3.1
PDCD2-211ENST00000544336 TRIM17Q9Y577 477 aa34.4■■■■□ 3.1
PDCD2-211ENST00000544336 EYA2O00167 538 aa34.39■■■■□ 3.1
PDCD2-211ENST00000544336 PTPN18Q99952 460 aa34.39■■■■□ 3.1
PDCD2-211ENST00000544336 SLC5A1P13866 664 aa34.37■■■■□ 3.09
PDCD2-211ENST00000544336 VGLL4Q14135 290 aa34.37■■■■□ 3.09
PDCD2-211ENST00000544336 TMOD2Q9NZR1 351 aa34.37■■■■□ 3.09
PDCD2-211ENST00000544336 KIF16BQ96L93 1317 aa34.36■■■■□ 3.09
PDCD2-211ENST00000544336 PDE4DIPQ5VU43 2346 aa34.36■■■■□ 3.09
PDCD2-211ENST00000544336 MAP3K9P80192 1104 aa34.36■■■■□ 3.09
PDCD2-211ENST00000544336 OTOP1Q7RTM1 612 aa34.36■■■■□ 3.09
PDCD2-211ENST00000544336 ZDHHC15Q96MV8 337 aa34.36■■■■□ 3.09
PDCD2-211ENST00000544336 SIL1Q9H173 461 aa34.36■■■■□ 3.09
PDCD2-211ENST00000544336 CSADQ9Y600 493 aa34.36■■■■□ 3.09
PDCD2-211ENST00000544336 MAST3O60307 1309 aa34.35■■■■□ 3.09
PDCD2-211ENST00000544336 TESPA1A2RU30 521 aaPredicted RBP34.35■■■■□ 3.09
PDCD2-211ENST00000544336 DDX55Q8NHQ9 600 aaKnown RBP eCLIP34.35■■■■□ 3.091e-10■□□□□ 8.2
PDCD2-211ENST00000544336 CD99L2Q8TCZ2 262 aa34.35■■■■□ 3.09
PDCD2-211ENST00000544336 UBTFL1P0CB47 393 aaPredicted RBP34.34■■■■□ 3.09
PDCD2-211ENST00000544336 ATG9AQ7Z3C6 839 aa34.34■■■■□ 3.09
PDCD2-211ENST00000544336 LPIN2Q92539 896 aa34.34■■■■□ 3.09
PDCD2-211ENST00000544336 OTUD5Q96G74 571 aa34.34■■■■□ 3.09
PDCD2-211ENST00000544336 MS4A4AQ96JQ5 239 aa34.34■■■■□ 3.09
PDCD2-211ENST00000544336 APOBEC3HQ6NTF7 200 aaKnown RBP34.33■■■■□ 3.09
PDCD2-211ENST00000544336 ERO1AQ96HE7 468 aa34.33■■■■□ 3.09
PDCD2-211ENST00000544336 NOB1Q9ULX3 412 aaKnown RBP34.33■■■■□ 3.09
PDCD2-211ENST00000544336 BRI3BPQ8WY22 251 aa34.32■■■■□ 3.08
PDCD2-211ENST00000544336 SUGT1Q9Y2Z0 365 aa34.32■■■■□ 3.08
PDCD2-211ENST00000544336 CCL15-CCL14A0A0B4J2E2 113 aa34.31■■■■□ 3.08
PDCD2-211ENST00000544336 SLC34A2O95436 690 aa34.31■■■■□ 3.08
PDCD2-211ENST00000544336 CCL15Q16663 113 aa34.31■■■■□ 3.08
PDCD2-211ENST00000544336 TRMT2AQ8IZ69 625 aaKnown RBP34.31■■■■□ 3.08
PDCD2-211ENST00000544336 MRIQ9BWK5 157 aa34.31■■■■□ 3.08
PDCD2-211ENST00000544336 HHIPL2Q6UWX4 724 aa34.3■■■■□ 3.08
PDCD2-211ENST00000544336 WDR66Q8TBY9 1149 aa34.3■■■■□ 3.08
PDCD2-211ENST00000544336 GTF2A2P52657 109 aa34.29■■■■□ 3.08
PDCD2-211ENST00000544336 SP3Q02447 781 aa34.29■■■■□ 3.08
PDCD2-211ENST00000544336 FAM83AQ86UY5 434 aa34.29■■■■□ 3.08
PDCD2-211ENST00000544336 WRNIP1Q96S55 665 aa34.29■■■■□ 3.08
PDCD2-211ENST00000544336 ATP2B3Q16720 1220 aa34.28■■■■□ 3.08
PDCD2-211ENST00000544336 LRRFIP2Q9Y608 721 aaKnown RBP34.28■■■■□ 3.08
PDCD2-211ENST00000544336 TAF1CQ15572 869 aaPredicted RBP34.27■■■■□ 3.08
PDCD2-211ENST00000544336 ZKSCAN4Q969J2 545 aaPredicted RBP34.27■■■■□ 3.08
PDCD2-211ENST00000544336 EFCC1Q9HA90 598 aa34.27■■■■□ 3.08
PDCD2-211ENST00000544336 CEP126Q9P2H0 1117 aa34.27■■■■□ 3.08
PDCD2-211ENST00000544336 SNCAIPQ9Y6H5 919 aa34.27■■■■□ 3.08
PDCD2-211ENST00000544336 FKBP1CQ5VVH2 108 aa34.26■■■■□ 3.08
PDCD2-211ENST00000544336 API5Q9BZZ5 524 aaKnown RBP34.26■■■■□ 3.08
PDCD2-211ENST00000544336 PA2G4Q9UQ80 394 aaKnown RBP34.26■■■■□ 3.08
PDCD2-211ENST00000544336 PTPN22Q9Y2R2 807 aa34.26■■■■□ 3.08
PDCD2-211ENST00000544336 SPDYE5A6NIY4 337 aa34.25■■■■□ 3.07
PDCD2-211ENST00000544336 CIAO1O76071 339 aa34.25■■■■□ 3.07
PDCD2-211ENST00000544336 CAP1Q01518 475 aa34.25■■■■□ 3.07
PDCD2-211ENST00000544336 DIXDC1Q155Q3 683 aa34.25■■■■□ 3.07
PDCD2-211ENST00000544336 FAM43AQ8N2R8 423 aa34.25■■■■□ 3.07
PDCD2-211ENST00000544336 AK9Q5TCS8 1911 aa34.25■■■■□ 3.07
PDCD2-211ENST00000544336 CT47B1P0C2W7 299 aaPredicted RBP34.24■■■■□ 3.07
PDCD2-211ENST00000544336 MIGA2Q7L4E1 593 aa34.24■■■■□ 3.07
PDCD2-211ENST00000544336 HOOK2Q96ED9 719 aa34.24■■■■□ 3.07
PDCD2-211ENST00000544336 ZFYVE28Q9HCC9 887 aa34.24■■■■□ 3.07
PDCD2-211ENST00000544336 DAGLAQ9Y4D2 1042 aa34.24■■■■□ 3.07
PDCD2-211ENST00000544336 HTTP42858 3142 aa34.24■■■■□ 3.07
PDCD2-211ENST00000544336 PRDX5P30044 214 aa34.23■■■■□ 3.07
PDCD2-211ENST00000544336 DCAF15Q66K64 600 aa34.23■■■■□ 3.07
PDCD2-211ENST00000544336 ERO1BQ86YB8 467 aa34.23■■■■□ 3.07
PDCD2-211ENST00000544336 GNL3LQ9NVN8 582 aaKnown RBP34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms