RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	FER1L6	Q2WGJ9	1857 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	COL1A1	P02452	1464 aa	Predicted RBP	12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	LDHC	P07864	332 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	CYP7A1	P22680	504 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	MECOM	Q03112	1051 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	SLC9C2	Q5TAH2	1124 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	KBTBD3	Q8NAB2	608 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	GML	Q99445	158 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	GPRC5D	Q9NZD1	345 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	HACL1	Q9UJ83	578 aa		12.29	□□□□□ -0.44
CPSF7-221	ENST00000543545	SHTN1	A0MZ66	631 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	IQCA1L	A6NCM1	817 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	GSPT1	P15170	499 aa	Known RBP	12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	SDS	P20132	328 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	EPS15	P42566	896 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	CRK	P46108	304 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	DLGAP5	Q15398	846 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	DIXDC1	Q155Q3	683 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	CFAP100	Q494V2	611 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	TEKT1	Q969V4	418 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	NSUN4	Q96CB9	384 aa	Known RBP	12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	NOL10	Q9BSC4	688 aa	Known RBP	12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	RRAGC	Q9HB90	399 aa		12.28	□□□□□ -0.44
CPSF7-221	ENST00000543545	RNF113A	O15541	343 aa	Known RBP	12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	ZFY	P08048	801 aa	Predicted RBP	12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	PDE6A	P16499	860 aa		12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	YY1	P25490	414 aa		12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	MMP14	P50281	582 aa		12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	SAMD7	Q7Z3H4	446 aa		12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	MYOZ2	Q9NPC6	264 aa		12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	SERPINA10	Q9UK55	444 aa		12.27	□□□□□ -0.45
CPSF7-221	ENST00000543545	IGSF3	O75054	1194 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	BAG3	O95817	575 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	VEGFA	P15692	232 aa	Predicted RBP	12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	EPHX2	P34913	555 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	ADD2	P35612	726 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	ZNF280A	P59817	542 aa	Predicted RBP	12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	HDLBP	Q00341	1268 aa	Known RBP	12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	KIF4B	Q2VIQ3	1234 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	EAPP	Q56P03	285 aa	Predicted RBP	12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	BMP2KL	Q5H9B9	411 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	HHIPL2	Q6UWX4	724 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	MRI	Q9BWK5	157 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	ADARB2	Q9NS39	739 aa	Known RBP	12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	DIAPH3	Q9NSV4	1193 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	ZNF532	Q9HCE3	1301 aa		12.26	□□□□□ -0.45
CPSF7-221	ENST00000543545	HIP1	O00291	1037 aa		12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	MYO1B	O43795	1136 aa		12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	BTD	P43251	543 aa		12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	UBE3C	Q15386	1083 aa		12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	SLFNL1	Q499Z3	407 aa		12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	TMED8	Q6PL24	325 aa	Predicted RBP	12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	MIGA1	Q8NAN2	632 aa		12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	DAGLA	Q9Y4D2	1042 aa		12.25	□□□□□ -0.45
CPSF7-221	ENST00000543545	MROH7-TTC4	A0A0A0MT08	1334 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	MAGEB6P1	A0A0J9YX57	407 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	CHGB	P05060	677 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	UTRN	P46939	3433 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	CASC1	Q6TDU7	716 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	TRPM4	Q8TD43	1214 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	FAM163A	Q96GL9	167 aa	Predicted RBP	12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	PRMT6	Q96LA8	375 aa	Predicted RBP	12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	ZDHHC15	Q96MV8	337 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	NMRK2	Q9NPI5	230 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	USP40	Q9NVE5	1235 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	CLEC11A	Q9Y240	323 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545	PCDHAC2	Q9Y5I4	1007 aa		12.24	□□□□□ -0.45
CPSF7-221	ENST00000543545		A0A1B0GUL6	1792 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	SPDYE2B	A6NHP3	402 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	EGFR	P00533	1210 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	SPDYE6	P0CI01	402 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	NBPF9	Q3BBW0	867 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	CWC27	Q6UX04	472 aa	Known RBP	12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	USP50	Q70EL3	339 aa	Predicted RBP	12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	ADGRA1	Q86SQ6	560 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	PNMA8A	Q86V59	439 aa	Predicted RBP	12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	ZNF384	Q8TF68	577 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	APPBP2	Q92624	585 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	AIDA	Q96BJ3	306 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	TDRD3	Q9H7E2	651 aa	Known RBP	12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	VEZT	Q9HBM0	779 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	TMOD2	Q9NZR1	351 aa		12.23	□□□□□ -0.45
CPSF7-221	ENST00000543545	GAK	O14976	1311 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	GPR75-ASB3	A0A0A6YYF3	556 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	TCRBV5S4A2T	A0A5A2	114 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	CLRN2	A0PK11	232 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	POTEC	B2RU33	542 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	WNT10B	O00744	389 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	CDC45	O75419	566 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	MBD4	O95243	580 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	PLCG2	P16885	1265 aa		12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	DYNLL1	P63167	89 aa	Known RBP	12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	NMI	Q13287	307 aa	Predicted RBP	12.22	□□□□□ -0.45
CPSF7-221	ENST00000543545	ZMYM1	Q5SVZ6	1142 aa		12.22	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms