RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 A0A1W2PQ64 194 aa19.33■□□□□ 0.69
KDM2B-216ENST00000543025 A0A1W2PQD8 194 aa19.33■□□□□ 0.69
KDM2B-216ENST00000543025 CCDC57Q2TAC2 916 aa19.33■□□□□ 0.69
KDM2B-216ENST00000543025 TTC39AQ5SRH9 613 aa19.33■□□□□ 0.69
KDM2B-216ENST00000543025 FMR1NBQ8N0W7 255 aaPredicted RBP19.33■□□□□ 0.69
KDM2B-216ENST00000543025 AKAP2Q9Y2D5 859 aa19.33■□□□□ 0.69
KDM2B-216ENST00000543025 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.68
KDM2B-216ENST00000543025 SYCP1Q15431 976 aa19.33■□□□□ 0.68
KDM2B-216ENST00000543025 GORABQ5T7V8 394 aa19.33■□□□□ 0.68
KDM2B-216ENST00000543025 FBXO3Q9UK99 471 aa19.33■□□□□ 0.68
KDM2B-216ENST00000543025 WASHC4Q2M389 1173 aa19.32■□□□□ 0.68
KDM2B-216ENST00000543025 LINC00301Q8NCQ3 95 aa19.32■□□□□ 0.68
KDM2B-216ENST00000543025 KCNG4Q8TDN1 519 aa19.32■□□□□ 0.68
KDM2B-216ENST00000543025 C8orf76Q96K31 380 aa19.32■□□□□ 0.68
KDM2B-216ENST00000543025 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
KDM2B-216ENST00000543025 FOXP2O15409 715 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 KRT27Q7Z3Y8 459 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 XAGE2Q96GT9 111 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 KCNQ2O43526 872 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 HAND2P61296 217 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 SF3A1Q15459 793 aaKnown RBP19.31■□□□□ 0.68
KDM2B-216ENST00000543025 AOPEPQ8N6M6 819 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 GPHNQ9NQX3 736 aaPredicted RBP19.31■□□□□ 0.68
KDM2B-216ENST00000543025 POLR3EQ9NVU0 708 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 BTAF1O14981 1849 aa19.31■□□□□ 0.68
KDM2B-216ENST00000543025 A0A087WWV3 80 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 A0A1B0GVL5 298 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 PRC1O43663 620 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 YEATS4O95619 227 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 FGAP02671 866 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 STK38Q15208 465 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 CCDC112Q8NEF3 446 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 ASAP1Q9ULH1 1129 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 KLF18A0A0U1RQI7 1052 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 SKILP12757 684 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 NDUFA8P51970 172 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 BRAPQ7Z569 592 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 MB21D2Q8IYB1 491 aaPredicted RBP19.3■□□□□ 0.68
KDM2B-216ENST00000543025 FBXO18Q8NFZ0 1043 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 APPBP2Q92624 585 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 ISCA1Q9BUE6 129 aa19.3■□□□□ 0.68
KDM2B-216ENST00000543025 GOLGA8BA8MQT2 603 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 ADORA1P30542 326 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 NCBP1Q09161 790 aaKnown RBP19.29■□□□□ 0.68
KDM2B-216ENST00000543025 ARID5BQ14865 1188 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 CEP135Q66GS9 1140 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 FILIP1Q7Z7B0 1213 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 NCOA7Q8NI08 942 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
KDM2B-216ENST00000543025 CLIC4Q9Y696 253 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 CCDC69A6NI79 296 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 ZRSR1Q15695 479 aaKnown RBP19.29■□□□□ 0.68
KDM2B-216ENST00000543025 OTUD7BQ6GQQ9 843 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 RALYLQ86SE5 291 aaKnown RBP19.29■□□□□ 0.68
KDM2B-216ENST00000543025 KIAA1468Q9P260 1216 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 ORC3Q9UBD5 711 aaPredicted RBP19.29■□□□□ 0.68
KDM2B-216ENST00000543025 EP400Q96L91 3159 aa19.29■□□□□ 0.68
KDM2B-216ENST00000543025 POLR3DP05423 398 aaPredicted RBP19.28■□□□□ 0.68
KDM2B-216ENST00000543025 MYSM1Q5VVJ2 828 aa19.28■□□□□ 0.68
KDM2B-216ENST00000543025 HPS5Q9UPZ3 1129 aa19.28■□□□□ 0.68
KDM2B-216ENST00000543025 CPLX1O14810 134 aa19.28■□□□□ 0.68
KDM2B-216ENST00000543025 SPTLC2O15270 562 aa19.28■□□□□ 0.68
KDM2B-216ENST00000543025 CBX1P83916 185 aa19.28■□□□□ 0.68
KDM2B-216ENST00000543025 ATP2B3Q16720 1220 aa19.28■□□□□ 0.68
KDM2B-216ENST00000543025 BPIFA3Q9BQP9 254 aa19.28■□□□□ 0.68
KDM2B-216ENST00000543025 PUS7LQ9H0K6 701 aaKnown RBP19.28■□□□□ 0.68
KDM2B-216ENST00000543025 ZNF213O14771 459 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 GSDMDP57764 484 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 CCZ1BP86790 482 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.68
KDM2B-216ENST00000543025 TCIRG1Q13488 830 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 PTF1AQ7RTS3 328 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 WDR19Q8NEZ3 1342 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 ZAP70P43403 619 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 SCARF1Q14162 830 aa19.27■□□□□ 0.68
KDM2B-216ENST00000543025 DDX60Q8IY21 1712 aaKnown RBP19.27■□□□□ 0.67
KDM2B-216ENST00000543025 ANTXR2P58335 489 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 PTPN14Q15678 1187 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 TAF7LQ5H9L4 462 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 SYNE3Q6ZMZ3 975 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 FBXW7Q969H0 707 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 USP27XA6NNY8 438 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 NYAP1Q6ZVC0 841 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 IMPACTQ9P2X3 320 aa19.26■□□□□ 0.67
KDM2B-216ENST00000543025 GPAA1O43292 621 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 DPCR1Q3MIW9 517 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 RGS22Q8NE09 1264 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 ZNF592Q92610 1267 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 PRDM10Q9NQV6 1147 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 PRDM4Q9UKN5 801 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 NEDD4P46934 1319 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 U2AF2P26368 475 aaKnown RBP eCLIP19.25■□□□□ 0.67
KDM2B-216ENST00000543025 TRIM28Q13263 835 aaKnown RBP19.25■□□□□ 0.67
KDM2B-216ENST00000543025 HSP90AB3PQ58FF7 597 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 PLA2G12BQ9BX93 195 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 OSBPL5Q9H0X9 879 aaPredicted RBP19.25■□□□□ 0.67
KDM2B-216ENST00000543025 KCND1Q9NSA2 647 aa19.25■□□□□ 0.67
KDM2B-216ENST00000543025 PCCAP05165 728 aaPredicted RBP19.24■□□□□ 0.67
KDM2B-216ENST00000543025 IFIT5Q13325 482 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms