RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
SLC3A2-220ENST00000542922 EPB41L4AQ9HCS5 686 aaPredicted RBP16.06■□□□□ 0.16
SLC3A2-220ENST00000542922 THRAP3Q9Y2W1 955 aaKnown RBP16.06■□□□□ 0.16
SLC3A2-220ENST00000542922 LAMB2P55268 1798 aa16.06■□□□□ 0.16
SLC3A2-220ENST00000542922 NEDD4P46934 1319 aa16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 WTIPA6NIX2 430 aaPredicted RBP16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 UQCRFS1P1P0C7P4 283 aa16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 SLC5A1P13866 664 aa16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 RXRAP19793 462 aa16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 MAGEB6Q8N7X4 407 aa16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 STRBPQ96SI9 672 aaKnown RBP16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 TACC3Q9Y6A5 838 aa16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 CASZ1Q86V15 1759 aa16.05■□□□□ 0.16
SLC3A2-220ENST00000542922 ZNF500O60304 480 aaPredicted RBP16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 BCAMP50895 628 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 C3orf67Q6ZVT6 689 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 LUZP1Q86V48 1076 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 DDX19AQ9NUU7 478 aaKnown RBP16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 CFAP45Q9UL16 551 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 CHD4Q14839 1912 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 BCORQ6W2J9 1755 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 B4E1Z4 1266 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 MBD4O95243 580 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 RBM43Q6ZSC3 357 aaKnown RBP16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 PTF1AQ7RTS3 328 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 ARMT1Q9H993 441 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 ECM29Q5VYK3 1845 aa16.04■□□□□ 0.16
SLC3A2-220ENST00000542922 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 ANO6Q4KMQ2 910 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 AIDAQ96BJ3 306 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 AK7Q96M32 723 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 ORC3Q9UBD5 711 aaPredicted RBP16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 RCOR1Q9UKL0 485 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 TAOK2Q9UL54 1235 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 IQSEC3Q9UPP2 1182 aaPredicted RBP16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 PRKAB2O43741 272 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 OFD1O75665 1012 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 KIF3AQ9Y496 699 aa16.03■□□□□ 0.16
SLC3A2-220ENST00000542922 A0A087WWV3 80 aa16.02■□□□□ 0.16
SLC3A2-220ENST00000542922 CTDSPL2Q05D32 466 aa16.02■□□□□ 0.16
SLC3A2-220ENST00000542922 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.16
SLC3A2-220ENST00000542922 CCAR1Q8IX12 1150 aaKnown RBP16.02■□□□□ 0.16
SLC3A2-220ENST00000542922 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.16
SLC3A2-220ENST00000542922 FAM200AQ8TCP9 573 aa16.02■□□□□ 0.16
SLC3A2-220ENST00000542922 A0A1B0GUL6 1792 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 BCL9LQ86UU0 1499 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 KIF28PB7ZC32 967 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 SH2B2O14492 632 aaPredicted RBP16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 POLR3DP05423 398 aaPredicted RBP16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 CHRNDQ07001 517 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 FAM98CQ17RN3 349 aaKnown RBP16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 PARP10Q53GL7 1025 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 C8orf76Q96K31 380 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 CBX8Q9HC52 389 aa16.02■□□□□ 0.15
SLC3A2-220ENST00000542922 C17orf53Q8N3J3 647 aaPredicted RBP16.01■□□□□ 0.15
SLC3A2-220ENST00000542922 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
SLC3A2-220ENST00000542922 MYL10Q9BUA6 226 aa16.01■□□□□ 0.15
SLC3A2-220ENST00000542922 IGHMBP2P38935 993 aaKnown RBP16■□□□□ 0.15
SLC3A2-220ENST00000542922 TRDNQ13061 729 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 ERFEQ4G0M1 354 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 IFNL3Q8IZI9 196 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 STK11IPQ8N1F8 1099 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 DNAJC25Q9H1X3 360 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 ANGEL1Q9UNK9 670 aaKnown RBP16■□□□□ 0.15
SLC3A2-220ENST00000542922 CLIC4Q9Y696 253 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 WDR19Q8NEZ3 1342 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 UBE2Q2LH0YL09 131 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 CPLX1O14810 134 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 CDC27P30260 824 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 SNW1Q13573 536 aaKnown RBP16■□□□□ 0.15
SLC3A2-220ENST00000542922 BARGINQ6ZT62 677 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 MICU3Q86XE3 530 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 MIGA1Q8NAN2 632 aa16■□□□□ 0.15
SLC3A2-220ENST00000542922 ERCC4Q92889 916 aaPredicted RBP16■□□□□ 0.15
SLC3A2-220ENST00000542922 COL1A1P02452 1464 aaPredicted RBP15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 GSG1L2A8MUP6 293 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 ME1P48163 572 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 MAP3K12Q12852 859 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 BICDL1Q6ZP65 573 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 SPC24Q8NBT2 197 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 FBXO18Q8NFZ0 1043 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 ZNF396Q96N95 335 aaPredicted RBP15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 ZMYM6O95789 1325 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 APOA5Q6Q788 366 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 ADGRA1Q86SQ6 560 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 IGDCC4Q8TDY8 1250 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 PHKBQ93100 1093 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 NAPBQ9H115 298 aa15.99■□□□□ 0.15
SLC3A2-220ENST00000542922 PATL2C9JE40 543 aaKnown RBP15.98■□□□□ 0.15
SLC3A2-220ENST00000542922 SMIM22K7EJ46 135 aa15.98■□□□□ 0.15
SLC3A2-220ENST00000542922 METAP2P50579 478 aaKnown RBP eCLIP15.98■□□□□ 0.151e-7■■■□□ 18.7
SLC3A2-220ENST00000542922 FSIP1Q8NA03 581 aa15.98■□□□□ 0.15
SLC3A2-220ENST00000542922 ENGASEQ8NFI3 743 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms