RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 FGD1P98174 961 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 FAM84BQ96KN1 310 aaPredicted RBP16.71■□□□□ 0.27
LDB3-207ENST00000542786 NCOA5Q9HCD5 579 aaKnown RBP16.71■□□□□ 0.27
LDB3-207ENST00000542786 TACC3Q9Y6A5 838 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 PATL2C9JE40 543 aaKnown RBP16.71■□□□□ 0.27
LDB3-207ENST00000542786 ZBTB22O15209 634 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 RPS8P62241 208 aaKnown RBP16.71■□□□□ 0.27
LDB3-207ENST00000542786 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 FAM196AQ6ZSG2 479 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 AIDAQ96BJ3 306 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 ARMT1Q9H993 441 aa16.71■□□□□ 0.27
LDB3-207ENST00000542786 HMGN5P82970 282 aaKnown RBP16.7■□□□□ 0.26
LDB3-207ENST00000542786 NAA16Q6N069 864 aaPredicted RBP16.7■□□□□ 0.26
LDB3-207ENST00000542786 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 TTC6Q86TZ1 520 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 IFNL3Q8IZI9 196 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 ELP1O95163 1332 aa16.7■□□□□ 0.26
LDB3-207ENST00000542786 SYCE3A1L190 88 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 ADRA2BP18089 450 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 KLRK1P26718 216 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
LDB3-207ENST00000542786 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
LDB3-207ENST00000542786 NFIXQ14938 502 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 DDX11Q96FC9 970 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 BRWD3Q6RI45 1802 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 NEDD4P46934 1319 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
LDB3-207ENST00000542786 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 FDPSP14324 419 aaKnown RBP16.69■□□□□ 0.26
LDB3-207ENST00000542786 TRAPPC3LQ5T215 181 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 ADGRA1Q86SQ6 560 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 ZNF384Q8TF68 577 aa16.69■□□□□ 0.26
LDB3-207ENST00000542786 SH2B2O14492 632 aaPredicted RBP16.68■□□□□ 0.26
LDB3-207ENST00000542786 PRKAB2O43741 272 aa16.68■□□□□ 0.26
LDB3-207ENST00000542786 CSPP1Q1MSJ5 1256 aa16.68■□□□□ 0.26
LDB3-207ENST00000542786 RALYLQ86SE5 291 aaKnown RBP16.68■□□□□ 0.26
LDB3-207ENST00000542786 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
LDB3-207ENST00000542786 IQSEC3Q9UPP2 1182 aaPredicted RBP16.68■□□□□ 0.26
LDB3-207ENST00000542786 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
LDB3-207ENST00000542786 KRT85P78386 507 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 SYAP1Q96A49 352 aaPredicted RBP16.67■□□□□ 0.26
LDB3-207ENST00000542786 QTRT2Q9H974 415 aaKnown RBP16.67■□□□□ 0.26
LDB3-207ENST00000542786 CHD4Q14839 1912 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 SEMA3EO15041 775 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 APPP05067 770 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 GNAT2P19087 354 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 RFC4P35249 363 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 CHMP4CQ96CF2 233 aa16.67■□□□□ 0.26
LDB3-207ENST00000542786 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
LDB3-207ENST00000542786 PHF14O94880 888 aa16.66■□□□□ 0.26
LDB3-207ENST00000542786 NASPP49321 788 aaPredicted RBP16.66■□□□□ 0.26
LDB3-207ENST00000542786 CCDC183Q5T5S1 534 aa16.66■□□□□ 0.26
LDB3-207ENST00000542786 IGDCC4Q8TDY8 1250 aa16.66■□□□□ 0.26
LDB3-207ENST00000542786 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
LDB3-207ENST00000542786 ANKRD2Q9GZV1 360 aa16.66■□□□□ 0.26
LDB3-207ENST00000542786 LRP2BPQ9P2M1 347 aa16.66■□□□□ 0.26
LDB3-207ENST00000542786 GOLGA8BA8MQT2 603 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 B4E1Z4 1266 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 CYP7A1P22680 504 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 LEO1Q8WVC0 666 aaPredicted RBP16.65■□□□□ 0.26
LDB3-207ENST00000542786 NAPBQ9H115 298 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 ZSCAN16Q9H4T2 348 aaPredicted RBP16.65■□□□□ 0.26
LDB3-207ENST00000542786 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
LDB3-207ENST00000542786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.65■□□□□ 0.26
LDB3-207ENST00000542786 CAVIN4Q5BKX8 364 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 MAST2Q6P0Q8 1798 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 SLC51AQ86UW1 340 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 SENP2Q9HC62 589 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
LDB3-207ENST00000542786 GYS1P13807 737 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 TRDNQ13061 729 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 ILDR1Q86SU0 546 aaPredicted RBP16.64■□□□□ 0.25
LDB3-207ENST00000542786 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 TMEM87BQ96K49 555 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 SCAND2PQ9GZW5 306 aaPredicted RBP16.64■□□□□ 0.25
LDB3-207ENST00000542786 LY9Q9HBG7 655 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 SLC4A4Q9Y6R1 1079 aa16.64■□□□□ 0.25
LDB3-207ENST00000542786 NID2Q14112 1375 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 H3BQV1 296 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 CTDSPL2Q05D32 466 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 AKNAD1Q5T1N1 836 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 IFFO2Q5TF58 517 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 KLHL34Q8N239 644 aa16.63■□□□□ 0.25
LDB3-207ENST00000542786 TFIP11Q9UBB9 837 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms