RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 SUGCTQ9HAC7 445 aa9.05□□□□□ -0.96
XRCC4-206ENST00000542685 EIF4EBP3O60516 100 aaPredicted RBP9.04□□□□□ -0.96
XRCC4-206ENST00000542685 TIAF1O95411 115 aa9.04□□□□□ -0.96
XRCC4-206ENST00000542685 CYP11A1P05108 521 aa9.04□□□□□ -0.96
XRCC4-206ENST00000542685 MAP4P27816 1152 aaKnown RBP9.04□□□□□ -0.96
XRCC4-206ENST00000542685 ZDHHC13Q8IUH4 622 aa9.04□□□□□ -0.96
XRCC4-206ENST00000542685 DBNDD2Q9BQY9 259 aa9.04□□□□□ -0.96
XRCC4-206ENST00000542685 ZNF576Q9H609 170 aa9.04□□□□□ -0.96
XRCC4-206ENST00000542685 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
XRCC4-206ENST00000542685 POU4F3Q15319 338 aa9.03□□□□□ -0.96
XRCC4-206ENST00000542685 EPS8L3Q8TE67 593 aaKnown RBP9.03□□□□□ -0.96
XRCC4-206ENST00000542685 CCDC180Q9P1Z9 1646 aa9.02□□□□□ -0.96
XRCC4-206ENST00000542685 B3GALT4O96024 378 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 CTSBP07858 339 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 ITPKAP23677 461 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 USP11P51784 963 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 TMC7Q7Z402 723 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 SHKBP1Q8TBC3 707 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 DDX54Q8TDD1 881 aaKnown RBP9.02□□□□□ -0.97
XRCC4-206ENST00000542685 ALKBH8Q96BT7 664 aaKnown RBP9.02□□□□□ -0.97
XRCC4-206ENST00000542685 ABCB6Q9NP58 842 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 DCTN4Q9UJW0 460 aa9.02□□□□□ -0.97
XRCC4-206ENST00000542685 COBLO75128 1261 aa9.01□□□□□ -0.97
XRCC4-206ENST00000542685 MED26O95402 600 aa9.01□□□□□ -0.97
XRCC4-206ENST00000542685 MAPK1P28482 360 aa9.01□□□□□ -0.97
XRCC4-206ENST00000542685 CD97P48960 835 aa9.01□□□□□ -0.97
XRCC4-206ENST00000542685 SOX4Q06945 474 aaPredicted RBP9.01□□□□□ -0.97
XRCC4-206ENST00000542685 MFSD14AQ96MC6 490 aa9.01□□□□□ -0.97
XRCC4-206ENST00000542685 CORO1BQ9BR76 489 aa9.01□□□□□ -0.97
XRCC4-206ENST00000542685 TRIM56Q9BRZ2 755 aaKnown RBP9.01□□□□□ -0.97
XRCC4-206ENST00000542685 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
XRCC4-206ENST00000542685 ECEL1O95672 775 aa9□□□□□ -0.97
XRCC4-206ENST00000542685 ZNF157P51786 506 aaPredicted RBP9□□□□□ -0.97
XRCC4-206ENST00000542685 GRM2Q14416 872 aa9□□□□□ -0.97
XRCC4-206ENST00000542685 NFKBIBQ15653 356 aa9□□□□□ -0.97
XRCC4-206ENST00000542685 CDPF1Q6NVV7 123 aa9□□□□□ -0.97
XRCC4-206ENST00000542685 PRPF40BQ6NWY9 871 aaKnown RBP9□□□□□ -0.97
XRCC4-206ENST00000542685 C2CD4AQ8NCU7 369 aaPredicted RBP9□□□□□ -0.97
XRCC4-206ENST00000542685 FBLIM1Q8WUP2 373 aa9□□□□□ -0.97
XRCC4-206ENST00000542685 TRAK1Q9UPV9 953 aa9□□□□□ -0.97
XRCC4-206ENST00000542685 FAM95CA0A1B0GW59 222 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 WDR64B1ANS9 1081 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 ADH5P11766 374 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 AKAP4Q5JQC9 854 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 PI16Q6UXB8 463 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 FBXL6Q8N531 539 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 RAD18Q9NS91 495 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 NLRP2Q9NX02 1062 aa8.99□□□□□ -0.97
XRCC4-206ENST00000542685 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
XRCC4-206ENST00000542685 GRIK1P39086 918 aa8.98□□□□□ -0.97
XRCC4-206ENST00000542685 PTPN12Q05209 780 aaKnown RBP8.98□□□□□ -0.97
XRCC4-206ENST00000542685 HP1BP3Q5SSJ5 553 aaPredicted RBP8.98□□□□□ -0.97
XRCC4-206ENST00000542685 ZFYVE1Q9HBF4 777 aa8.98□□□□□ -0.97
XRCC4-206ENST00000542685 PDE3AQ14432 1141 aa8.97□□□□□ -0.97
XRCC4-206ENST00000542685 PAOXQ6QHF9 649 aa8.97□□□□□ -0.97
XRCC4-206ENST00000542685 DTHD1Q6ZMT9 781 aa8.97□□□□□ -0.97
XRCC4-206ENST00000542685 GLIS3Q8NEA6 775 aa8.97□□□□□ -0.97
XRCC4-206ENST00000542685 ZCCHC6Q5VYS8 1495 aaKnown RBP8.96□□□□□ -0.97
XRCC4-206ENST00000542685 FCGRTP55899 365 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 PLCB3Q01970 1234 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 FAAP100Q0VG06 881 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 DYMQ7RTS9 669 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 YIPF2Q9BWQ6 316 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 AP4E1Q9UPM8 1137 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 ACTL7BQ9Y614 415 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 IVNS1ABPQ9Y6Y0 642 aa8.96□□□□□ -0.98
XRCC4-206ENST00000542685 PNMA6FA0A0J9YX94 578 aa8.95□□□□□ -0.98
XRCC4-206ENST00000542685 RAB6AP20340 208 aa8.95□□□□□ -0.98
XRCC4-206ENST00000542685 AP3B2Q13367 1082 aa8.95□□□□□ -0.98
XRCC4-206ENST00000542685 RPS26P11Q5JNZ5 115 aaPredicted RBP8.95□□□□□ -0.98
XRCC4-206ENST00000542685 INTS5Q6P9B9 1019 aaKnown RBP8.95□□□□□ -0.98
XRCC4-206ENST00000542685 ZC3H12CQ9C0D7 883 aaKnown RBP8.95□□□□□ -0.98
XRCC4-206ENST00000542685 ATG3Q9NT62 314 aa8.95□□□□□ -0.98
XRCC4-206ENST00000542685 PPP4R2Q9NY27 417 aa8.95□□□□□ -0.98
XRCC4-206ENST00000542685 KIAA1324LA8MWY0 1029 aaPredicted RBP8.94□□□□□ -0.98
XRCC4-206ENST00000542685 F13BP05160 661 aa8.94□□□□□ -0.98
XRCC4-206ENST00000542685 DSC3Q14574 896 aa8.94□□□□□ -0.98
XRCC4-206ENST00000542685 SHISA5Q8N114 240 aa8.94□□□□□ -0.98
XRCC4-206ENST00000542685 GIMAP7Q8NHV1 300 aa8.94□□□□□ -0.98
XRCC4-206ENST00000542685 BCO2Q9BYV7 579 aa8.94□□□□□ -0.98
XRCC4-206ENST00000542685 TREHO43280 583 aa8.93□□□□□ -0.98
XRCC4-206ENST00000542685 AOC2O75106 756 aa8.93□□□□□ -0.98
XRCC4-206ENST00000542685 NFICP08651 508 aa8.93□□□□□ -0.98
XRCC4-206ENST00000542685 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.93□□□□□ -0.98
XRCC4-206ENST00000542685 EZH1Q92800 747 aaPredicted RBP8.93□□□□□ -0.98
XRCC4-206ENST00000542685 OSBPL1AQ9BXW6 950 aa8.93□□□□□ -0.98
XRCC4-206ENST00000542685 FAM105AQ9NUU6 356 aa8.93□□□□□ -0.98
XRCC4-206ENST00000542685 PIM2Q9P1W9 311 aa8.93□□□□□ -0.98
XRCC4-206ENST00000542685 GPN3Q9UHW5 284 aaPredicted RBP8.93□□□□□ -0.98
XRCC4-206ENST00000542685 LIG1P18858 919 aa8.92□□□□□ -0.98
XRCC4-206ENST00000542685 HOXA10P31260 410 aaPredicted RBP8.92□□□□□ -0.98
XRCC4-206ENST00000542685 ASPAP45381 313 aa8.92□□□□□ -0.98
XRCC4-206ENST00000542685 ENOX2Q16206 610 aaKnown RBP8.92□□□□□ -0.98
XRCC4-206ENST00000542685 NXPE4Q6UWF7 544 aa8.92□□□□□ -0.98
XRCC4-206ENST00000542685 TBC1D32Q96NH3 1257 aa8.92□□□□□ -0.98
XRCC4-206ENST00000542685 WDR18Q9BV38 432 aa8.92□□□□□ -0.98
XRCC4-206ENST00000542685 LEMD3Q9Y2U8 911 aa8.92□□□□□ -0.98
XRCC4-206ENST00000542685 ADMP35318 185 aa8.91□□□□□ -0.98
XRCC4-206ENST00000542685 MAPK8P45983 427 aa8.91□□□□□ -0.98
XRCC4-206ENST00000542685 WDR89Q96FK6 387 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms