RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 ZAR1Q86SH2 424 aa9.66□□□□□ -0.86
SRGAP1-204ENST00000542381 FAM170BA6NMN3 283 aa9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 CYP26A1O43174 497 aa9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 PRNPP04156 253 aa9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 CTSBP07858 339 aa9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 USP5P45974 858 aa9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 ZNF423Q2M1K9 1284 aa9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 EZH1Q92800 747 aaPredicted RBP9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 GATA6Q92908 595 aa9.65□□□□□ -0.86
SRGAP1-204ENST00000542381 ADH5P11766 374 aa9.64□□□□□ -0.87
SRGAP1-204ENST00000542381 COL19A1Q14993 1142 aa9.64□□□□□ -0.87
SRGAP1-204ENST00000542381 SPRED3Q2MJR0 410 aa9.64□□□□□ -0.87
SRGAP1-204ENST00000542381 GJD3Q8N144 294 aa9.64□□□□□ -0.87
SRGAP1-204ENST00000542381 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
SRGAP1-204ENST00000542381 ANO2Q9NQ90 1003 aa9.64□□□□□ -0.87
SRGAP1-204ENST00000542381 ACTL7BQ9Y614 415 aa9.64□□□□□ -0.87
SRGAP1-204ENST00000542381 A0A096LPE4 126 aa9.63□□□□□ -0.87
SRGAP1-204ENST00000542381 A0A1W2PPZ6 126 aa9.63□□□□□ -0.87
SRGAP1-204ENST00000542381 PCDH1Q08174 1060 aa9.63□□□□□ -0.87
SRGAP1-204ENST00000542381 PHLDB3Q6NSJ2 640 aa9.63□□□□□ -0.87
SRGAP1-204ENST00000542381 ERICH6Q7L0X2 663 aa9.63□□□□□ -0.87
SRGAP1-204ENST00000542381 A0A1W2PP55 124 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 CARNS1A5YM72 827 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 NFICP08651 508 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 MAOBP27338 520 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 GRIA4P48058 902 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 FKBP4Q02790 459 aaKnown RBP eCLIP9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 CBLL1Q75N03 491 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 TP53INP2Q8IXH6 220 aa9.62□□□□□ -0.87
SRGAP1-204ENST00000542381 CCNJLQ8IV13 435 aa9.61□□□□□ -0.87
SRGAP1-204ENST00000542381 FBXL18Q96ME1 805 aa9.61□□□□□ -0.87
SRGAP1-204ENST00000542381 YIPF2Q9BWQ6 316 aa9.61□□□□□ -0.87
SRGAP1-204ENST00000542381 CLEC4MQ9H2X3 399 aaPredicted RBP9.61□□□□□ -0.87
SRGAP1-204ENST00000542381 BSDC1Q9NW68 430 aaPredicted RBP9.61□□□□□ -0.87
SRGAP1-204ENST00000542381 ABL1P00519 1130 aa9.6□□□□□ -0.87
SRGAP1-204ENST00000542381 RAB6AP20340 208 aa9.6□□□□□ -0.87
SRGAP1-204ENST00000542381 ZNF211Q13398 564 aaPredicted RBP9.6□□□□□ -0.87
SRGAP1-204ENST00000542381 SF3B2Q13435 895 aaKnown RBP9.6□□□□□ -0.87
SRGAP1-204ENST00000542381 POU4F3Q15319 338 aa9.6□□□□□ -0.87
SRGAP1-204ENST00000542381 TCF12Q99081 682 aa9.6□□□□□ -0.87
SRGAP1-204ENST00000542381 ECEL1O95672 775 aa9.59□□□□□ -0.87
SRGAP1-204ENST00000542381 AKAP4Q5JQC9 854 aa9.59□□□□□ -0.87
SRGAP1-204ENST00000542381 DYMQ7RTS9 669 aa9.59□□□□□ -0.87
SRGAP1-204ENST00000542381 SEMA6CQ9H3T2 930 aa9.59□□□□□ -0.87
SRGAP1-204ENST00000542381 LIN7BQ9HAP6 207 aa9.59□□□□□ -0.87
SRGAP1-204ENST00000542381 FAM105AQ9NUU6 356 aa9.59□□□□□ -0.87
SRGAP1-204ENST00000542381 CYP11A1P05108 521 aa9.58□□□□□ -0.88
SRGAP1-204ENST00000542381 FZD5Q13467 585 aa9.58□□□□□ -0.88
SRGAP1-204ENST00000542381 GALNT12Q8IXK2 581 aa9.58□□□□□ -0.88
SRGAP1-204ENST00000542381 LRRC4CQ9HCJ2 640 aa9.58□□□□□ -0.88
SRGAP1-204ENST00000542381 ZC3H7BQ9UGR2 993 aaKnown RBP9.58□□□□□ -0.88
SRGAP1-204ENST00000542381 EIF4EBP3O60516 100 aaPredicted RBP9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 MAP7Q14244 749 aa9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 DUSP27Q5VZP5 1158 aa9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 USPL1Q5W0Q7 1092 aa9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 OGFOD2Q6N063 350 aa9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 ZNF765Q7L2R6 523 aa9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 FLCNQ8NFG4 579 aa9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 TRIM56Q9BRZ2 755 aaKnown RBP9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 ACSS3Q9H6R3 686 aa9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 PAK6Q9NQU5 681 aaPredicted RBP9.57□□□□□ -0.88
SRGAP1-204ENST00000542381 RAD18Q9NS91 495 aa9.56□□□□□ -0.88
SRGAP1-204ENST00000542381 MTMR7Q9Y216 660 aa9.56□□□□□ -0.88
SRGAP1-204ENST00000542381 ARID1BQ8NFD5 2236 aaPredicted RBP9.55□□□□□ -0.88
SRGAP1-204ENST00000542381 DYNC1LI2O43237 492 aaPredicted RBP9.55□□□□□ -0.88
SRGAP1-204ENST00000542381 C14orf37Q86TY3 774 aa9.55□□□□□ -0.88
SRGAP1-204ENST00000542381 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
SRGAP1-204ENST00000542381 AP4E1Q9UPM8 1137 aa9.55□□□□□ -0.88
SRGAP1-204ENST00000542381 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.54□□□□□ -0.88
SRGAP1-204ENST00000542381 ITGB5P18084 799 aa9.54□□□□□ -0.88
SRGAP1-204ENST00000542381 ASPAP45381 313 aa9.54□□□□□ -0.88
SRGAP1-204ENST00000542381 SEZ6L2Q6UXD5 910 aa9.54□□□□□ -0.88
SRGAP1-204ENST00000542381 LGR6Q9HBX8 967 aa9.54□□□□□ -0.88
SRGAP1-204ENST00000542381 C1GALT1Q9NS00 363 aa9.54□□□□□ -0.88
SRGAP1-204ENST00000542381 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
SRGAP1-204ENST00000542381 B3GALT4O96024 378 aa9.53□□□□□ -0.88
SRGAP1-204ENST00000542381 CORO1BQ9BR76 489 aa9.53□□□□□ -0.88
SRGAP1-204ENST00000542381 GSX1Q9H4S2 264 aaPredicted RBP9.53□□□□□ -0.88
SRGAP1-204ENST00000542381 CYP27A1Q02318 531 aa9.52□□□□□ -0.89
SRGAP1-204ENST00000542381 HP1BP3Q5SSJ5 553 aaPredicted RBP9.52□□□□□ -0.89
SRGAP1-204ENST00000542381 ASIC4Q96FT7 647 aa9.52□□□□□ -0.89
SRGAP1-204ENST00000542381 DAGLAQ9Y4D2 1042 aa9.52□□□□□ -0.89
SRGAP1-204ENST00000542381 AOC2O75106 756 aa9.51□□□□□ -0.89
SRGAP1-204ENST00000542381 KIAA0319Q5VV43 1072 aa9.51□□□□□ -0.89
SRGAP1-204ENST00000542381 AGBL5Q8NDL9 886 aa9.51□□□□□ -0.89
SRGAP1-204ENST00000542381 ZNF576Q9H609 170 aa9.51□□□□□ -0.89
SRGAP1-204ENST00000542381 ZFYVE1Q9HBF4 777 aa9.51□□□□□ -0.89
SRGAP1-204ENST00000542381 WDR18Q9BV38 432 aa9.5□□□□□ -0.89
SRGAP1-204ENST00000542381 PPP1R9AQ9ULJ8 1098 aa9.5□□□□□ -0.89
SRGAP1-204ENST00000542381 JUNBP17275 347 aaPredicted RBP9.49□□□□□ -0.89
SRGAP1-204ENST00000542381 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
SRGAP1-204ENST00000542381 ECM1Q16610 540 aa9.49□□□□□ -0.89
SRGAP1-204ENST00000542381 OGFOD3Q6PK18 319 aa9.49□□□□□ -0.89
SRGAP1-204ENST00000542381 ZNF574Q6ZN55 896 aaPredicted RBP9.49□□□□□ -0.89
SRGAP1-204ENST00000542381 BCL7CQ8WUZ0 217 aaPredicted RBP9.49□□□□□ -0.89
SRGAP1-204ENST00000542381 EHD4Q9H223 541 aa9.49□□□□□ -0.89
SRGAP1-204ENST00000542381 ICMTO60725 284 aa9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 C8AP07357 584 aa9.48□□□□□ -0.89
SRGAP1-204ENST00000542381 ITPKAP23677 461 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms