RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 ATP2B4P23634 1241 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 ZAP70P43403 619 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 KCNJ4P48050 445 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 BCAMP50895 628 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.62
LDHA-220ENST00000542179 DSG2Q14126 1118 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 CWC27Q6UX04 472 aaKnown RBP11.15□□□□□ -0.62
LDHA-220ENST00000542179 SPATA5Q8NB90 893 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
LDHA-220ENST00000542179 HELLSQ9NRZ9 838 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 HMG20BQ9P0W2 317 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 NDUFB9Q9Y6M9 179 aa11.15□□□□□ -0.62
LDHA-220ENST00000542179 COL11A2P13942 1736 aaPredicted RBP11.15□□□□□ -0.63
LDHA-220ENST00000542179 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
LDHA-220ENST00000542179 RNF113AO15541 343 aaKnown RBP11.14□□□□□ -0.63
LDHA-220ENST00000542179 IGSF3O75054 1194 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 CYP2E1P05181 493 aaPredicted RBP11.14□□□□□ -0.63
LDHA-220ENST00000542179 GPSM2P81274 684 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 NMIQ13287 307 aaPredicted RBP11.14□□□□□ -0.63
LDHA-220ENST00000542179 RASGRF1Q13972 1273 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 C2CD5Q86YS7 1000 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 IL17RAQ96F46 866 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 MTFR1LQ9H019 292 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 IL25Q9H293 177 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 ANTXR1Q9H6X2 564 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 ANKIB1Q9P2G1 1089 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 C10orf71Q711Q0 1435 aa11.14□□□□□ -0.63
LDHA-220ENST00000542179 LTBP1Q14766 1721 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 WTIPA6NIX2 430 aaPredicted RBP11.13□□□□□ -0.63
LDHA-220ENST00000542179 HIBADHP31937 336 aaKnown RBP11.13□□□□□ -0.63
LDHA-220ENST00000542179 GYG1P46976 350 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 MCMDC2Q4G0Z9 681 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 ZMYM1Q5SVZ6 1142 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 ZSCAN25Q6NSZ9 544 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 KIAA1211Q6ZU35 1233 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 CNKSR1Q969H4 720 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 FAM227BQ96M60 508 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.13□□□□□ -0.63
LDHA-220ENST00000542179 LSG1Q9H089 658 aaKnown RBP11.13□□□□□ -0.63
LDHA-220ENST00000542179 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 NSFL1CQ9UNZ2 370 aaKnown RBP11.13□□□□□ -0.63
LDHA-220ENST00000542179 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
LDHA-220ENST00000542179 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 ANAPC15P60006 121 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 UBE3CQ15386 1083 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 VPS37DQ86XT2 251 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 KIF2CQ99661 725 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 ANO2Q9NQ90 1003 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 PIH1D3Q9NQM4 214 aaKnown RBP11.12□□□□□ -0.63
LDHA-220ENST00000542179 GGA1Q9UJY5 639 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
LDHA-220ENST00000542179 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
LDHA-220ENST00000542179 MCCP23508 829 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 KLRK1P26718 216 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 HSPA4P34932 840 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 CC2D2BQ6DHV5 1058 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 TMED8Q6PL24 325 aaPredicted RBP11.11□□□□□ -0.63
LDHA-220ENST00000542179 TXNRD3Q86VQ6 643 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 TDRD7Q8NHU6 1098 aaKnown RBP11.11□□□□□ -0.63
LDHA-220ENST00000542179 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 ZNF622Q969S3 477 aaKnown RBP eCLIP11.11□□□□□ -0.63
LDHA-220ENST00000542179 IPO9Q96P70 1041 aaKnown RBP11.11□□□□□ -0.63
LDHA-220ENST00000542179 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 TMX4Q9H1E5 349 aaPredicted RBP11.11□□□□□ -0.63
LDHA-220ENST00000542179 DOCK2Q92608 1830 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 DLEC1Q9Y238 1755 aa11.11□□□□□ -0.63
LDHA-220ENST00000542179 CCDC171Q6TFL3 1326 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 UFL1O94874 794 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 POLD1P28340 1107 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 CHRNA5P30532 468 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 ADD2P35612 726 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 TGFB2P61812 414 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 MAP3K12Q12852 859 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 R3HDM1Q15032 1099 aaKnown RBP11.1□□□□□ -0.63
LDHA-220ENST00000542179 GRIPAP1Q4V328 841 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 ZNF804AQ7Z570 1209 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 MPNDQ8N594 471 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 C7orf43Q8WVR3 580 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 APPBP2Q92624 585 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 KCNB2Q92953 911 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 POLLQ9UGP5 575 aa11.1□□□□□ -0.63
LDHA-220ENST00000542179 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 MYH7P12883 1935 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 COL1A1P02452 1464 aaPredicted RBP11.09□□□□□ -0.63
LDHA-220ENST00000542179 TCRBV5S4A2TA0A5A2 114 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 ZBTB7AO95365 584 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 IL1R1P14778 569 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 NECTIN1Q15223 517 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 WASHC4Q2M389 1173 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 SLC9C2Q5TAH2 1124 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 PRPF40BQ6NWY9 871 aaKnown RBP11.09□□□□□ -0.63
LDHA-220ENST00000542179 SLC51AQ86UW1 340 aa11.09□□□□□ -0.63
LDHA-220ENST00000542179 DUOX1Q9NRD9 1551 aa11.08□□□□□ -0.64
LDHA-220ENST00000542179 IDH1O75874 414 aaKnown RBP11.08□□□□□ -0.64
LDHA-220ENST00000542179 CHGBP05060 677 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms