RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 ARL4DP49703 201 aa9.57□□□□□ -0.88
C12orf56-204ENST00000541802 GSTM4Q03013 218 aa9.57□□□□□ -0.88
C12orf56-204ENST00000541802 C19orf57Q0VDD7 668 aa9.57□□□□□ -0.88
C12orf56-204ENST00000541802 MAP4K3Q8IVH8 894 aa9.57□□□□□ -0.88
C12orf56-204ENST00000541802 BACH2Q9BYV9 841 aa9.57□□□□□ -0.88
C12orf56-204ENST00000541802 DDX3YO15523 660 aaKnown RBP9.56□□□□□ -0.88
C12orf56-204ENST00000541802 B3GALT4O96024 378 aa9.56□□□□□ -0.88
C12orf56-204ENST00000541802 GRIK4Q16099 956 aa9.56□□□□□ -0.88
C12orf56-204ENST00000541802 TSNAXIP1Q2TAA8 658 aa9.56□□□□□ -0.88
C12orf56-204ENST00000541802 KLHL23Q8NBE8 558 aa9.56□□□□□ -0.88
C12orf56-204ENST00000541802 WNT8BQ93098 351 aa9.56□□□□□ -0.88
C12orf56-204ENST00000541802 OSGEPQ9NPF4 335 aa9.56□□□□□ -0.88
C12orf56-204ENST00000541802 PPM1HQ9ULR3 514 aa9.56□□□□□ -0.88
C12orf56-204ENST00000541802 BTBD11A6QL63 1104 aa9.55□□□□□ -0.88
C12orf56-204ENST00000541802 TM4SF5O14894 197 aa9.55□□□□□ -0.88
C12orf56-204ENST00000541802 TAF1CQ15572 869 aaPredicted RBP9.55□□□□□ -0.88
C12orf56-204ENST00000541802 KRTAP9-9Q9BYP9 154 aa9.55□□□□□ -0.88
C12orf56-204ENST00000541802 KRTAP9-4Q9BYQ2 154 aa9.55□□□□□ -0.88
C12orf56-204ENST00000541802 SRA1Q9HD15 236 aaKnown RBP9.55□□□□□ -0.88
C12orf56-204ENST00000541802 TMEM39AQ9NV64 488 aa9.55□□□□□ -0.88
C12orf56-204ENST00000541802 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
C12orf56-204ENST00000541802 DLL1O00548 723 aa9.54□□□□□ -0.88
C12orf56-204ENST00000541802 ELNP15502 786 aa9.54□□□□□ -0.88
C12orf56-204ENST00000541802 CD68P34810 354 aaPredicted RBP9.54□□□□□ -0.88
C12orf56-204ENST00000541802 NLRP12P59046 1061 aa9.54□□□□□ -0.88
C12orf56-204ENST00000541802 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
C12orf56-204ENST00000541802 CEP44Q9C0F1 390 aa9.54□□□□□ -0.88
C12orf56-204ENST00000541802 SOX17Q9H6I2 414 aaPredicted RBP9.54□□□□□ -0.88
C12orf56-204ENST00000541802 USP31Q70CQ4 1352 aa9.53□□□□□ -0.88
C12orf56-204ENST00000541802 SPATA31C1P0DKV0 1188 aa9.53□□□□□ -0.88
C12orf56-204ENST00000541802 GATA4P43694 442 aa9.53□□□□□ -0.88
C12orf56-204ENST00000541802 PPP2R3AQ06190 1150 aa9.53□□□□□ -0.88
C12orf56-204ENST00000541802 CCDC85BQ15834 202 aaPredicted RBP9.53□□□□□ -0.88
C12orf56-204ENST00000541802 FOXD4L6Q3SYB3 417 aaPredicted RBP9.53□□□□□ -0.88
C12orf56-204ENST00000541802 LDLRAD1Q5T700 205 aa9.53□□□□□ -0.88
C12orf56-204ENST00000541802 SHISA2Q6UWI4 295 aa9.53□□□□□ -0.88
C12orf56-204ENST00000541802 FOXD4L3Q6VB84 417 aaPredicted RBP9.53□□□□□ -0.88
C12orf56-204ENST00000541802 NECAB3Q96P71 396 aaPredicted RBP9.53□□□□□ -0.88
C12orf56-204ENST00000541802 ADAM11O75078 769 aa9.52□□□□□ -0.89
C12orf56-204ENST00000541802 RECKO95980 971 aa9.52□□□□□ -0.89
C12orf56-204ENST00000541802 CELA3AP09093 270 aa9.52□□□□□ -0.89
C12orf56-204ENST00000541802 VAMP1P23763 118 aa9.52□□□□□ -0.89
C12orf56-204ENST00000541802 DDX54Q8TDD1 881 aaKnown RBP9.52□□□□□ -0.89
C12orf56-204ENST00000541802 USP26Q9BXU7 913 aa9.52□□□□□ -0.89
C12orf56-204ENST00000541802 ENC1O14682 589 aa9.51□□□□□ -0.89
C12orf56-204ENST00000541802 PAGE1O75459 146 aa9.51□□□□□ -0.89
C12orf56-204ENST00000541802 TRIM56Q9BRZ2 755 aaKnown RBP9.51□□□□□ -0.89
C12orf56-204ENST00000541802 ST13P50502 369 aaKnown RBP9.5□□□□□ -0.89
C12orf56-204ENST00000541802 IGF2-ASQ6U949 168 aa9.5□□□□□ -0.89
C12orf56-204ENST00000541802 SV2BQ7L1I2 683 aa9.5□□□□□ -0.89
C12orf56-204ENST00000541802 DCAF11Q8TEB1 546 aa9.5□□□□□ -0.89
C12orf56-204ENST00000541802 ANKRD24Q8TF21 1146 aa9.5□□□□□ -0.89
C12orf56-204ENST00000541802 ZFP64Q9NPA5 681 aa9.5□□□□□ -0.89
C12orf56-204ENST00000541802 WISP1O95388 367 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 ECEL1O95672 775 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 APBA3O96018 575 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 CYP11A1P05108 521 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 SELPP16109 830 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 MAOBP27338 520 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 MAP3K11Q16584 847 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
C12orf56-204ENST00000541802 STK35Q8TDR2 534 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 UBASH3BQ8TF42 649 aa9.49□□□□□ -0.89
C12orf56-204ENST00000541802 E9PSI1 815 aa9.48□□□□□ -0.89
C12orf56-204ENST00000541802 POU4F3Q15319 338 aa9.48□□□□□ -0.89
C12orf56-204ENST00000541802 ARTNQ5T4W7 220 aa9.48□□□□□ -0.89
C12orf56-204ENST00000541802 SULF2Q8IWU5 870 aa9.48□□□□□ -0.89
C12orf56-204ENST00000541802 ZC3H12CQ9C0D7 883 aaKnown RBP9.48□□□□□ -0.89
C12orf56-204ENST00000541802 NRSN2Q9GZP1 204 aa9.48□□□□□ -0.89
C12orf56-204ENST00000541802 USP21Q9UK80 565 aa9.48□□□□□ -0.89
C12orf56-204ENST00000541802 NME2P22392 152 aa9.47□□□□□ -0.89
C12orf56-204ENST00000541802 AP3B2Q13367 1082 aa9.47□□□□□ -0.89
C12orf56-204ENST00000541802 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
C12orf56-204ENST00000541802 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
C12orf56-204ENST00000541802 CBX8Q9HC52 389 aa9.47□□□□□ -0.89
C12orf56-204ENST00000541802 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 F6X3S4 739 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
C12orf56-204ENST00000541802 DLGAP3O95886 979 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 CTSBP07858 339 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 ARNTP27540 789 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 PCNX4Q63HM2 1172 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 ACAD11Q709F0 780 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 NBPF11Q86T75 865 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 LENG1Q96BZ8 264 aaPredicted RBP9.46□□□□□ -0.9
C12orf56-204ENST00000541802 NOC4LQ9BVI4 516 aaKnown RBP9.46□□□□□ -0.9
C12orf56-204ENST00000541802 SAMM50Q9Y512 469 aa9.46□□□□□ -0.9
C12orf56-204ENST00000541802 ALX3O95076 343 aa9.45□□□□□ -0.9
C12orf56-204ENST00000541802 BMP6P22004 513 aa9.45□□□□□ -0.9
C12orf56-204ENST00000541802 ZNF76P36508 570 aa9.45□□□□□ -0.9
C12orf56-204ENST00000541802 NKAPLQ5M9Q1 402 aa9.45□□□□□ -0.9
C12orf56-204ENST00000541802 RASIP1Q5U651 963 aa9.45□□□□□ -0.9
C12orf56-204ENST00000541802 KIAA1211Q6ZU35 1233 aa9.45□□□□□ -0.9
C12orf56-204ENST00000541802 AGGF1Q8N302 714 aaeCLIP9.45□□□□□ -0.9
C12orf56-204ENST00000541802 NACC1Q96RE7 527 aa9.45□□□□□ -0.9
C12orf56-204ENST00000541802 KRTAP4-8A0A0G2JLE6 195 aa9.44□□□□□ -0.9
C12orf56-204ENST00000541802 C9orf172C9J069 976 aa9.44□□□□□ -0.9
C12orf56-204ENST00000541802 SCAMP3O14828 347 aaKnown RBP9.44□□□□□ -0.9
C12orf56-204ENST00000541802 GSTP1P09211 210 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms