RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 RASSF4Q9H2L5 321 aa17.19■□□□□ 0.34
AC005840.4-201ENST00000541242 A0A0G2JLW4 131 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 GCKRQ14397 625 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 CCDC158Q5M9N0 1113 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 CLIC4Q9Y696 253 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 NRDCO43847 1150 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 PFKFB2O60825 505 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 LMAN1P49257 510 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 KRT32Q14532 448 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 LRRFIP1Q32MZ4 808 aaKnown RBP17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 ANKRD13DQ6ZTN6 518 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 WDR24Q96S15 920 aa17.18■□□□□ 0.34
AC005840.4-201ENST00000541242 POLR3DP05423 398 aaPredicted RBP17.17■□□□□ 0.34
AC005840.4-201ENST00000541242 KCNJ6P48051 423 aa17.17■□□□□ 0.34
AC005840.4-201ENST00000541242 HSD3B7Q9H2F3 369 aa17.17■□□□□ 0.34
AC005840.4-201ENST00000541242 PRDM11Q9NQV5 511 aa17.17■□□□□ 0.34
AC005840.4-201ENST00000541242 TMEM232C9JQI7 657 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 H3BQF6 201 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 HDAC5Q9UQL6 1122 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 VWA3AA6NCI4 1184 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 NEXNQ0ZGT2 675 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 PARD6BQ9BYG5 372 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 ADAM21Q9UKJ8 722 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 ZNF609O15014 1411 aa17.16■□□□□ 0.34
AC005840.4-201ENST00000541242 SLC3A2P08195 630 aaKnown RBP17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 GPS2Q13227 327 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 SF3A1Q15459 793 aaKnown RBP17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 HSP90AA4PQ58FG1 418 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 ADALQ6DHV7 355 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 FUT8Q9BYC5 575 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 ZSWIM4Q9H7M6 989 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 GLI3P10071 1580 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 TOM1L2Q6ZVM7 507 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 GJB4Q9NTQ9 266 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
AC005840.4-201ENST00000541242 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.34
AC005840.4-201ENST00000541242 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.34
AC005840.4-201ENST00000541242 NLRP12P59046 1061 aa17.14■□□□□ 0.34
AC005840.4-201ENST00000541242 STK38Q15208 465 aa17.14■□□□□ 0.34
AC005840.4-201ENST00000541242 SRRTQ9BXP5 876 aaKnown RBP17.14■□□□□ 0.34
AC005840.4-201ENST00000541242 SLAIN2Q9P270 581 aa17.14■□□□□ 0.34
AC005840.4-201ENST00000541242 UBASH3AP57075 661 aa17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 GNG11P61952 73 aa17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 ARFGAP3Q9NP61 516 aa17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 TAOK2Q9UL54 1235 aa17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 SOS2Q07890 1332 aaPredicted RBP17.14■□□□□ 0.33
AC005840.4-201ENST00000541242 ZNF202O95125 648 aa17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 SERPINC1P01008 464 aa17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 TUBB4AP04350 444 aa17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 LINC00301Q8NCQ3 95 aa17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 ZCRB1Q8TBF4 217 aaKnown RBP17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 PPP2R2CQ9Y2T4 447 aa17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
AC005840.4-201ENST00000541242 NBPF26B4DH59 902 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 ATP8B1O43520 1251 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 CASQ1P31415 396 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 NBPF14Q5TI25 921 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 NBPF10Q6P3W6 841 aaKnown RBP17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 SRLQ86TD4 932 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 NBPF15Q8N660 670 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 RRP15Q9Y3B9 282 aaKnown RBP17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 CCP110O43303 1012 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 FBXO18Q8NFZ0 1043 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 SALL1Q9NSC2 1324 aa17.12■□□□□ 0.33
AC005840.4-201ENST00000541242 TPM1P09493 284 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 NOP2P46087 812 aaKnown RBP17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 MAP3K9P80192 1104 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 FOXR1Q6PIV2 292 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 UBE3BQ7Z3V4 1068 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 TMEM139Q8IV31 216 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 GPHNQ9NQX3 736 aaPredicted RBP17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 IRX3P78415 501 aaPredicted RBP17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 LONRF2Q1L5Z9 754 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 TOGARAM2Q6ZUX3 1019 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 RAB11FIP4Q86YS3 637 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 DHX58Q96C10 678 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 MRFAP1Q9Y605 127 aa17.11■□□□□ 0.33
AC005840.4-201ENST00000541242 RFX5P48382 616 aaPredicted RBP17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 GOLGA5Q8TBA6 731 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 AK7Q96M32 723 aa17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 IRX2Q9BZI1 471 aaPredicted RBP17.1■□□□□ 0.33
AC005840.4-201ENST00000541242 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms