RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CAVIN4Q5BKX8 364 aa30.16■■■□□ 2.42
LEMD3-203ENST00000541171 SSH1Q8WYL5 1049 aa30.16■■■□□ 2.42
LEMD3-203ENST00000541171 PTPRCP08575 1304 aa30.16■■■□□ 2.42
LEMD3-203ENST00000541171 CDAN1Q8IWY9 1227 aa30.15■■■□□ 2.42
LEMD3-203ENST00000541171 ELP3Q9H9T3 547 aa30.15■■■□□ 2.42
LEMD3-203ENST00000541171 E9PSI1 815 aa30.13■■■□□ 2.41
LEMD3-203ENST00000541171 PDE8BO95263 885 aa30.13■■■□□ 2.41
LEMD3-203ENST00000541171 TMEM39BQ9GZU3 492 aa30.13■■■□□ 2.41
LEMD3-203ENST00000541171 TNRC18O15417 2968 aaPredicted RBP30.12■■■□□ 2.41
LEMD3-203ENST00000541171 BCAMP50895 628 aa30.12■■■□□ 2.41
LEMD3-203ENST00000541171 TEPSINQ96N21 525 aa30.12■■■□□ 2.41
LEMD3-203ENST00000541171 USP44Q9H0E7 712 aa30.12■■■□□ 2.41
LEMD3-203ENST00000541171 TNNI2P48788 182 aa30.11■■■□□ 2.41
LEMD3-203ENST00000541171 OTUD7BQ6GQQ9 843 aa30.11■■■□□ 2.41
LEMD3-203ENST00000541171 VGLL2Q8N8G2 317 aa30.11■■■□□ 2.41
LEMD3-203ENST00000541171 TBC1D22AQ8WUA7 517 aa30.11■■■□□ 2.41
LEMD3-203ENST00000541171 OPTNQ96CV9 577 aa30.11■■■□□ 2.41
LEMD3-203ENST00000541171 TRIM17Q9Y577 477 aa30.11■■■□□ 2.41
LEMD3-203ENST00000541171 SLC34A2O95436 690 aa30.1■■■□□ 2.41
LEMD3-203ENST00000541171 CACNB3P54284 484 aa30.09■■■□□ 2.41
LEMD3-203ENST00000541171 PDE4DIPQ5VU43 2346 aa30.08■■■□□ 2.41
LEMD3-203ENST00000541171 SLFN5Q08AF3 891 aa30.08■■■□□ 2.41
LEMD3-203ENST00000541171 CRHR2Q13324 411 aa30.08■■■□□ 2.41
LEMD3-203ENST00000541171 TEKT1Q969V4 418 aa30.08■■■□□ 2.41
LEMD3-203ENST00000541171 PTPN18Q99952 460 aa30.08■■■□□ 2.41
LEMD3-203ENST00000541171 IFIT1P09914 478 aaKnown RBP30.07■■■□□ 2.4
LEMD3-203ENST00000541171 HDLBPQ00341 1268 aaKnown RBP30.07■■■□□ 2.4
LEMD3-203ENST00000541171 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.07■■■□□ 2.4
LEMD3-203ENST00000541171 CNKSR2Q8WXI2 1034 aa30.07■■■□□ 2.4
LEMD3-203ENST00000541171 ARAP2Q8WZ64 1704 aa30.06■■■□□ 2.4
LEMD3-203ENST00000541171 MAP3K9P80192 1104 aa30.06■■■□□ 2.4
LEMD3-203ENST00000541171 PUM3Q15397 648 aaKnown RBP30.06■■■□□ 2.4
LEMD3-203ENST00000541171 OTOP1Q7RTM1 612 aa30.06■■■□□ 2.4
LEMD3-203ENST00000541171 CDCA7LQ96GN5 454 aa30.06■■■□□ 2.4
LEMD3-203ENST00000541171 VGLL4Q14135 290 aa30.05■■■□□ 2.4
LEMD3-203ENST00000541171 CD99L2Q8TCZ2 262 aa30.05■■■□□ 2.4
LEMD3-203ENST00000541171 TESPA1A2RU30 521 aaPredicted RBP30.04■■■□□ 2.4
LEMD3-203ENST00000541171 FGFR2P21802 821 aa30.04■■■□□ 2.4
LEMD3-203ENST00000541171 ERO1AQ96HE7 468 aa30.04■■■□□ 2.4
LEMD3-203ENST00000541171 SMC4Q9NTJ3 1288 aa30.04■■■□□ 2.4
LEMD3-203ENST00000541171 TMOD2Q9NZR1 351 aa30.04■■■□□ 2.4
LEMD3-203ENST00000541171 CSADQ9Y600 493 aa30.04■■■□□ 2.4
LEMD3-203ENST00000541171 EYA2O00167 538 aa30.03■■■□□ 2.4
LEMD3-203ENST00000541171 RFX5P48382 616 aaPredicted RBP30.03■■■□□ 2.4
LEMD3-203ENST00000541171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.03■■■□□ 2.4
LEMD3-203ENST00000541171 MS4A4AQ96JQ5 239 aa30.03■■■□□ 2.4
LEMD3-203ENST00000541171 OTOFQ9HC10 1997 aa30.03■■■□□ 2.4
LEMD3-203ENST00000541171 ALDH1L2Q3SY69 923 aa30.02■■■□□ 2.4
LEMD3-203ENST00000541171 OTUD5Q96G74 571 aa30.02■■■□□ 2.4
LEMD3-203ENST00000541171 ZDHHC15Q96MV8 337 aa30.02■■■□□ 2.4
LEMD3-203ENST00000541171 SLC5A1P13866 664 aa30.01■■■□□ 2.39
LEMD3-203ENST00000541171 BRI3BPQ8WY22 251 aa30.01■■■□□ 2.39
LEMD3-203ENST00000541171 MAST3O60307 1309 aa30■■■□□ 2.39
LEMD3-203ENST00000541171 CCL15-CCL14A0A0B4J2E2 113 aa30■■■□□ 2.39
LEMD3-203ENST00000541171 SP3Q02447 781 aa30■■■□□ 2.39
LEMD3-203ENST00000541171 CCL15Q16663 113 aa30■■■□□ 2.39
LEMD3-203ENST00000541171 APOBEC3HQ6NTF7 200 aaKnown RBP30■■■□□ 2.39
LEMD3-203ENST00000541171 MRIQ9BWK5 157 aa30■■■□□ 2.39
LEMD3-203ENST00000541171 KIF16BQ96L93 1317 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 GTF2A2P52657 109 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 LPIN2Q92539 896 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 SIL1Q9H173 461 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 EFCC1Q9HA90 598 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 PTPN22Q9Y2R2 807 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 SUGT1Q9Y2Z0 365 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 LAMB1P07942 1786 aa29.99■■■□□ 2.39
LEMD3-203ENST00000541171 UBTFL1P0CB47 393 aaPredicted RBP29.97■■■□□ 2.39
LEMD3-203ENST00000541171 TAF1CQ15572 869 aaPredicted RBP29.97■■■□□ 2.39
LEMD3-203ENST00000541171 HHIPL2Q6UWX4 724 aa29.97■■■□□ 2.39
LEMD3-203ENST00000541171 ATG9AQ7Z3C6 839 aa29.97■■■□□ 2.39
LEMD3-203ENST00000541171 FAM83AQ86UY5 434 aa29.97■■■□□ 2.39
LEMD3-203ENST00000541171 WDR66Q8TBY9 1149 aa29.97■■■□□ 2.39
LEMD3-203ENST00000541171 WRNIP1Q96S55 665 aa29.97■■■□□ 2.39
LEMD3-203ENST00000541171 PRPF38BQ5VTL8 546 aaKnown RBP29.96■■■□□ 2.39
LEMD3-203ENST00000541171 ZKSCAN4Q969J2 545 aaPredicted RBP29.96■■■□□ 2.39
LEMD3-203ENST00000541171 ZFYVE28Q9HCC9 887 aa29.96■■■□□ 2.39
LEMD3-203ENST00000541171 NOB1Q9ULX3 412 aaKnown RBP29.96■■■□□ 2.39
LEMD3-203ENST00000541171 CAP1Q01518 475 aa29.95■■■□□ 2.39
LEMD3-203ENST00000541171 FAM43AQ8N2R8 423 aa29.95■■■□□ 2.39
LEMD3-203ENST00000541171 SNCAIPQ9Y6H5 919 aa29.95■■■□□ 2.39
LEMD3-203ENST00000541171 SPDYE5A6NIY4 337 aa29.94■■■□□ 2.38
LEMD3-203ENST00000541171 FKBP1CQ5VVH2 108 aa29.94■■■□□ 2.38
LEMD3-203ENST00000541171 HOOK2Q96ED9 719 aa29.94■■■□□ 2.38
LEMD3-203ENST00000541171 ATP2B3Q16720 1220 aa29.93■■■□□ 2.38
LEMD3-203ENST00000541171 INTS3Q68E01 1043 aaKnown RBP29.93■■■□□ 2.38
LEMD3-203ENST00000541171 MIGA2Q7L4E1 593 aa29.93■■■□□ 2.38
LEMD3-203ENST00000541171 CEP126Q9P2H0 1117 aa29.93■■■□□ 2.38
LEMD3-203ENST00000541171 POTEFA5A3E0 1075 aa29.92■■■□□ 2.38
LEMD3-203ENST00000541171 DCAF15Q66K64 600 aa29.92■■■□□ 2.38
LEMD3-203ENST00000541171 ERO1BQ86YB8 467 aa29.92■■■□□ 2.38
LEMD3-203ENST00000541171 DIXDC1Q155Q3 683 aa29.91■■■□□ 2.38
LEMD3-203ENST00000541171 TRMT2AQ8IZ69 625 aaKnown RBP29.91■■■□□ 2.38
LEMD3-203ENST00000541171 CETPP11597 493 aa29.9■■■□□ 2.38
LEMD3-203ENST00000541171 TCP10Q12799 353 aa29.9■■■□□ 2.38
LEMD3-203ENST00000541171 ZNF341Q9BYN7 854 aa29.9■■■□□ 2.38
LEMD3-203ENST00000541171 GNL3LQ9NVN8 582 aaKnown RBP29.9■■■□□ 2.38
LEMD3-203ENST00000541171 PA2G4Q9UQ80 394 aaKnown RBP29.9■■■□□ 2.38
LEMD3-203ENST00000541171 DAGLAQ9Y4D2 1042 aa29.9■■■□□ 2.38
LEMD3-203ENST00000541171 LRRFIP2Q9Y608 721 aaKnown RBP29.9■■■□□ 2.38
LEMD3-203ENST00000541171 IRF6O14896 467 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms