RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
LTBR-209ENST00000541102 LBX1P52954 281 aa17.62■□□□□ 0.41
LTBR-209ENST00000541102 MTX1Q13505 466 aa17.62■□□□□ 0.41
LTBR-209ENST00000541102 GNL3LQ9NVN8 582 aaKnown RBP17.62■□□□□ 0.41
LTBR-209ENST00000541102 SERPINA10Q9UK55 444 aa17.62■□□□□ 0.41
LTBR-209ENST00000541102 FAM155AB1AL88 458 aaPredicted RBP17.61■□□□□ 0.41
LTBR-209ENST00000541102 CRKP46108 304 aa17.61■□□□□ 0.41
LTBR-209ENST00000541102 TFCP2Q12800 502 aa17.61■□□□□ 0.41
LTBR-209ENST00000541102 IFFO2Q5TF58 517 aa17.61■□□□□ 0.41
LTBR-209ENST00000541102 TNS4Q8IZW8 715 aa17.61■□□□□ 0.41
LTBR-209ENST00000541102 TDRD3Q9H7E2 651 aaKnown RBP17.61■□□□□ 0.41
LTBR-209ENST00000541102 HSPA8P11142 646 aaKnown RBP17.6■□□□□ 0.41
LTBR-209ENST00000541102 ADORA1P30542 326 aa17.6■□□□□ 0.41
LTBR-209ENST00000541102 TIMM10P62072 90 aa17.6■□□□□ 0.41
LTBR-209ENST00000541102 KIF23Q02241 960 aaPredicted RBP17.6■□□□□ 0.41
LTBR-209ENST00000541102 G3BP1Q13283 466 aaKnown RBP eCLIP17.6■□□□□ 0.41
LTBR-209ENST00000541102 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.6■□□□□ 0.41
LTBR-209ENST00000541102 ZNF70Q9UC06 446 aaPredicted RBP17.6■□□□□ 0.41
LTBR-209ENST00000541102 TSKSQ9UJT2 592 aa17.6■□□□□ 0.41
LTBR-209ENST00000541102 PHKA1P46020 1223 aa17.59■□□□□ 0.41
LTBR-209ENST00000541102 CEP85Q6P2H3 762 aa17.59■□□□□ 0.41
LTBR-209ENST00000541102 ARMC9Q7Z3E5 817 aa17.59■□□□□ 0.41
LTBR-209ENST00000541102 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
LTBR-209ENST00000541102 WDR66Q8TBY9 1149 aa17.59■□□□□ 0.41
LTBR-209ENST00000541102 NEUROD6Q96NK8 337 aa17.59■□□□□ 0.41
LTBR-209ENST00000541102 FZD1Q9UP38 647 aa17.59■□□□□ 0.41
LTBR-209ENST00000541102 SLC10A3P09131 477 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 ATP8B2P98198 1209 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 RASA3Q14644 834 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 SPDYE2Q495Y8 402 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 TEKT1Q969V4 418 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 ANGEL1Q9UNK9 670 aaKnown RBP17.58■□□□□ 0.4
LTBR-209ENST00000541102 AKAP2Q9Y2D5 859 aa17.58■□□□□ 0.4
LTBR-209ENST00000541102 A0A1B0GUL7 405 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 TCP10L2B9ZVM9 353 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 HDLBPQ00341 1268 aaKnown RBP17.57■□□□□ 0.4
LTBR-209ENST00000541102 POLA2Q14181 598 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 CCDC102BQ68D86 513 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 SUGT1Q9Y2Z0 365 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 PPP2R3BQ9Y5P8 575 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 PAPPA2Q9BXP8 1791 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 THSD7BQ9C0I4 1608 aa17.57■□□□□ 0.4
LTBR-209ENST00000541102 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
LTBR-209ENST00000541102 SUPT20HL1Q3ZLR7 823 aa17.56■□□□□ 0.4
LTBR-209ENST00000541102 NBPF12Q5TAG4 269 aaPredicted RBP17.56■□□□□ 0.4
LTBR-209ENST00000541102 XAGE2Q96GT9 111 aa17.56■□□□□ 0.4
LTBR-209ENST00000541102 DENND2AQ9ULE3 1009 aa17.56■□□□□ 0.4
LTBR-209ENST00000541102 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.56■□□□□ 0.4
LTBR-209ENST00000541102 MAST3O60307 1309 aa17.55■□□□□ 0.4
LTBR-209ENST00000541102 PPP1R12BO60237 982 aaPredicted RBP17.55■□□□□ 0.4
LTBR-209ENST00000541102 CACNB3P54284 484 aa17.55■□□□□ 0.4
LTBR-209ENST00000541102 MKRN3Q13064 507 aaKnown RBP17.55■□□□□ 0.4
LTBR-209ENST00000541102 TNFAIP1Q13829 316 aa17.55■□□□□ 0.4
LTBR-209ENST00000541102 GORABQ5T7V8 394 aa17.55■□□□□ 0.4
LTBR-209ENST00000541102 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
LTBR-209ENST00000541102 MRIQ9BWK5 157 aa17.55■□□□□ 0.4
LTBR-209ENST00000541102 PCDHB15Q9Y5E8 787 aa17.55■□□□□ 0.4
LTBR-209ENST00000541102 COL1A1P02452 1464 aaPredicted RBP17.55■□□□□ 0.4
LTBR-209ENST00000541102 SEMA3EO15041 775 aa17.54■□□□□ 0.4
LTBR-209ENST00000541102 CA12O43570 354 aa17.54■□□□□ 0.4
LTBR-209ENST00000541102 TNNI2P48788 182 aa17.54■□□□□ 0.4
LTBR-209ENST00000541102 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
LTBR-209ENST00000541102 ZDHHC15Q96MV8 337 aa17.54■□□□□ 0.4
LTBR-209ENST00000541102 CSRNP1Q96S65 589 aa17.54■□□□□ 0.4
LTBR-209ENST00000541102 SURF6O75683 361 aaKnown RBP17.53■□□□□ 0.4
LTBR-209ENST00000541102 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
LTBR-209ENST00000541102 PRDX5P30044 214 aa17.53■□□□□ 0.4
LTBR-209ENST00000541102 LDLRAD1Q5T700 205 aa17.53■□□□□ 0.4
LTBR-209ENST00000541102 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
LTBR-209ENST00000541102 HHIPL2Q6UWX4 724 aa17.53■□□□□ 0.4
LTBR-209ENST00000541102 TMEM39BQ9GZU3 492 aa17.53■□□□□ 0.4
LTBR-209ENST00000541102 TMOD2Q9NZR1 351 aa17.53■□□□□ 0.4
LTBR-209ENST00000541102 ECM29Q5VYK3 1845 aa17.53■□□□□ 0.4
LTBR-209ENST00000541102 ARAP2Q8WZ64 1704 aa17.52■□□□□ 0.4
LTBR-209ENST00000541102 TRPA1O75762 1119 aa17.52■□□□□ 0.4
LTBR-209ENST00000541102 CAPN15O75808 1086 aa17.52■□□□□ 0.4
LTBR-209ENST00000541102 RASGRF1Q13972 1273 aa17.52■□□□□ 0.4
LTBR-209ENST00000541102 CDAN1Q8IWY9 1227 aa17.52■□□□□ 0.4
LTBR-209ENST00000541102 SLC10A4Q96EP9 437 aa17.52■□□□□ 0.4
LTBR-209ENST00000541102 ABCF2Q9UG63 623 aa17.52■□□□□ 0.4
LTBR-209ENST00000541102 MYH13Q9UKX3 1938 aa17.51■□□□□ 0.39
LTBR-209ENST00000541102 SSC5DA1L4H1 1573 aa17.51■□□□□ 0.39
LTBR-209ENST00000541102 USP2O75604 605 aaPredicted RBP17.51■□□□□ 0.39
LTBR-209ENST00000541102 CLMNQ96JQ2 1002 aa17.51■□□□□ 0.39
LTBR-209ENST00000541102 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
LTBR-209ENST00000541102 SALL1Q9NSC2 1324 aa17.5■□□□□ 0.39
LTBR-209ENST00000541102 IREB2P48200 963 aaKnown RBP17.5■□□□□ 0.39
LTBR-209ENST00000541102 MAP3K11Q16584 847 aa17.5■□□□□ 0.39
LTBR-209ENST00000541102 RPAP2Q8IXW5 612 aaPredicted RBP17.5■□□□□ 0.39
LTBR-209ENST00000541102 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
LTBR-209ENST00000541102 ZGPATQ8N5A5 531 aaKnown RBP17.5■□□□□ 0.39
LTBR-209ENST00000541102 TEPSINQ96N21 525 aa17.5■□□□□ 0.39
LTBR-209ENST00000541102 DAGLAQ9Y4D2 1042 aa17.5■□□□□ 0.39
LTBR-209ENST00000541102 CENPBP07199 599 aaPredicted RBP17.49■□□□□ 0.39
LTBR-209ENST00000541102 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
LTBR-209ENST00000541102 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
LTBR-209ENST00000541102 SPRYD7Q5W111 196 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms