RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ZBED3Q96IU2 234 aaPredicted RBP11.36□□□□□ -0.59
SNHG1-215ENST00000540904 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
SNHG1-215ENST00000540904 GPR108Q9NPR9 543 aa11.36□□□□□ -0.59
SNHG1-215ENST00000540904 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
SNHG1-215ENST00000540904 ZNF646O15015 1829 aaPredicted RBP11.36□□□□□ -0.59
SNHG1-215ENST00000540904 CLRN2A0PK11 232 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 PRDX5P30044 214 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 CRKP46108 304 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 PRAMEF18Q5VWM3 479 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 KLRG1Q96E93 195 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 CDCA5Q96FF9 252 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 CRBNQ96SW2 442 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 DBNDD2Q9BQY9 259 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 BCL11AQ9H165 835 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
SNHG1-215ENST00000540904 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
SNHG1-215ENST00000540904 CCDC158Q5M9N0 1113 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 TTC39AQ5SRH9 613 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 PI16Q6UXB8 463 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 AACSQ86V21 672 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 APOBEC3FQ8IUX4 373 aaKnown RBP11.34□□□□□ -0.59
SNHG1-215ENST00000540904 SPATA5Q8NB90 893 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 TEKT1Q969V4 418 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 EAF2Q96CJ1 260 aaPredicted RBP11.34□□□□□ -0.59
SNHG1-215ENST00000540904 CCDC8Q9H0W5 538 aaPredicted RBP11.34□□□□□ -0.59
SNHG1-215ENST00000540904 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
SNHG1-215ENST00000540904 VEZTQ9HBM0 779 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 TLR7Q9NYK1 1049 aaKnown RBP11.34□□□□□ -0.59
SNHG1-215ENST00000540904 ABCF2Q9UG63 623 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 MAST3O60307 1309 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 AOX1Q06278 1338 aa11.34□□□□□ -0.59
SNHG1-215ENST00000540904 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 UQCRFS1P1P0C7P4 283 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 ARID4AP29374 1257 aaPredicted RBP11.33□□□□□ -0.6
SNHG1-215ENST00000540904 HDLBPQ00341 1268 aaKnown RBP11.33□□□□□ -0.6
SNHG1-215ENST00000540904 DEFB115Q30KQ5 88 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
SNHG1-215ENST00000540904 ZGPATQ8N5A5 531 aaKnown RBP11.33□□□□□ -0.6
SNHG1-215ENST00000540904 KIF1BPQ96EK5 621 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 ZDHHC15Q96MV8 337 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 HMG20BQ9P0W2 317 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 DBNLQ9UJU6 430 aaKnown RBP11.33□□□□□ -0.6
SNHG1-215ENST00000540904 TLL2Q9Y6L7 1015 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 PDS5AQ29RF7 1337 aaKnown RBP11.33□□□□□ -0.6
SNHG1-215ENST00000540904 SALL1Q9NSC2 1324 aa11.33□□□□□ -0.6
SNHG1-215ENST00000540904 CNTNAP1P78357 1384 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 RASSF10A6NK89 507 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 ZBTB22O15209 634 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 MCAMP43121 646 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 DZIP1Q86YF9 867 aaKnown RBP11.32□□□□□ -0.6
SNHG1-215ENST00000540904 CLASRPQ8N2M8 674 aaKnown RBP11.32□□□□□ -0.6
SNHG1-215ENST00000540904 C2orf69Q8N8R5 385 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 MRIQ9BWK5 157 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 DEFB129Q9H1M3 183 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 GBA2Q9HCG7 927 aaPredicted RBP11.32□□□□□ -0.6
SNHG1-215ENST00000540904 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
SNHG1-215ENST00000540904 ZNF70Q9UC06 446 aaPredicted RBP11.32□□□□□ -0.6
SNHG1-215ENST00000540904 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
SNHG1-215ENST00000540904 NF2P35240 595 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 VEGFBP49765 207 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 GRM1Q13255 1194 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 SPTY2D1Q68D10 685 aaPredicted RBP11.31□□□□□ -0.6
SNHG1-215ENST00000540904 APOBEC3HQ6NTF7 200 aaKnown RBP11.31□□□□□ -0.6
SNHG1-215ENST00000540904 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 TBC1D9Q6ZT07 1266 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 PCDHB15Q9Y5E8 787 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 ARAP2Q8WZ64 1704 aa11.31□□□□□ -0.6
SNHG1-215ENST00000540904 TCP10L2B9ZVM9 353 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 IFIT2P09913 472 aaKnown RBP11.3□□□□□ -0.6
SNHG1-215ENST00000540904 CACNB3P54284 484 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 HUNKP57058 714 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 TNFAIP1Q13829 316 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 TTLL12Q14166 644 aaPredicted RBP11.3□□□□□ -0.6
SNHG1-215ENST00000540904 RASA3Q14644 834 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 ERICH6Q7L0X2 663 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 ZNF512BQ96KM6 892 aaPredicted RBP11.3□□□□□ -0.6
SNHG1-215ENST00000540904 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 LRP2BPQ9P2M1 347 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
SNHG1-215ENST00000540904 ZAP70P43403 619 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 MECOMQ03112 1051 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 PRKG1Q13976 671 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 MOB2Q70IA6 237 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 SLF2Q8IX21 1173 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 CAPNS2Q96L46 248 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 LRRCC1Q9C099 1032 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 RAI14Q9P0K7 980 aa11.29□□□□□ -0.6
SNHG1-215ENST00000540904 WDR33Q9C0J8 1336 aaKnown RBP11.29□□□□□ -0.6
SNHG1-215ENST00000540904 UBE2Q2LH0YL09 131 aa11.28□□□□□ -0.6
SNHG1-215ENST00000540904 SMARCA5O60264 1052 aaPredicted RBP11.28□□□□□ -0.6
SNHG1-215ENST00000540904 CYP2E1P05181 493 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms