RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 CD209Q9NNX6 404 aa29.24■■■□□ 2.27
TTC3-225ENST00000540756 E7EWF7 191 aa29.23■■■□□ 2.27
TTC3-225ENST00000540756 LARGE1O95461 756 aa29.23■■■□□ 2.27
TTC3-225ENST00000540756 KRT32Q14532 448 aa29.23■■■□□ 2.27
TTC3-225ENST00000540756 DUOX1Q9NRD9 1551 aa29.23■■■□□ 2.27
TTC3-225ENST00000540756 MECOMQ03112 1051 aa29.23■■■□□ 2.27
TTC3-225ENST00000540756 NSUN4Q96CB9 384 aaKnown RBP29.23■■■□□ 2.27
TTC3-225ENST00000540756 EPB41L4AQ9HCS5 686 aaPredicted RBP29.23■■■□□ 2.27
TTC3-225ENST00000540756 CHMP5Q9NZZ3 219 aa29.23■■■□□ 2.27
TTC3-225ENST00000540756 RIMBP2O15034 1052 aa29.22■■■□□ 2.27
TTC3-225ENST00000540756 GRIK5Q16478 980 aa29.22■■■□□ 2.27
TTC3-225ENST00000540756 CTNNA3Q9UI47 895 aa29.22■■■□□ 2.27
TTC3-225ENST00000540756 CUL4AQ13619 759 aa29.21■■■□□ 2.27
TTC3-225ENST00000540756 NAA16Q6N069 864 aaPredicted RBP29.21■■■□□ 2.27
TTC3-225ENST00000540756 CCDC125Q86Z20 511 aa29.21■■■□□ 2.27
TTC3-225ENST00000540756 ZNF219Q9P2Y4 722 aaPredicted RBP29.21■■■□□ 2.27
TTC3-225ENST00000540756 LIMCH1Q9UPQ0 1083 aa29.21■■■□□ 2.27
TTC3-225ENST00000540756 CHD4Q14839 1912 aa29.21■■■□□ 2.27
TTC3-225ENST00000540756 MPNDQ8N594 471 aa29.21■■■□□ 2.27
TTC3-225ENST00000540756 NBPF3Q9H094 633 aa29.21■■■□□ 2.27
TTC3-225ENST00000540756 DYNLL1P63167 89 aaKnown RBP29.2■■■□□ 2.27
TTC3-225ENST00000540756 LRRC2Q9BYS8 371 aa29.2■■■□□ 2.27
TTC3-225ENST00000540756 GSG1L2A8MUP6 293 aa29.2■■■□□ 2.26
TTC3-225ENST00000540756 PATL2C9JE40 543 aaKnown RBP29.2■■■□□ 2.26
TTC3-225ENST00000540756 TOB2Q14106 344 aaPredicted RBP29.2■■■□□ 2.26
TTC3-225ENST00000540756 IMMTQ16891 758 aaKnown RBP29.2■■■□□ 2.26
TTC3-225ENST00000540756 STYK1Q6J9G0 422 aa29.2■■■□□ 2.26
TTC3-225ENST00000540756 IL1R1P14778 569 aa29.19■■■□□ 2.26
TTC3-225ENST00000540756 RIOK1Q9BRS2 568 aaKnown RBP29.19■■■□□ 2.26
TTC3-225ENST00000540756 TPCN1Q9ULQ1 816 aa29.19■■■□□ 2.26
TTC3-225ENST00000540756 DTNBO60941 627 aa29.18■■■□□ 2.26
TTC3-225ENST00000540756 DPP8Q6V1X1 898 aaPredicted RBP29.18■■■□□ 2.26
TTC3-225ENST00000540756 IFNL3Q8IZI9 196 aa29.18■■■□□ 2.26
TTC3-225ENST00000540756 SLC4A4Q9Y6R1 1079 aa29.18■■■□□ 2.26
TTC3-225ENST00000540756 CCDC88AQ3V6T2 1871 aa29.18■■■□□ 2.26
TTC3-225ENST00000540756 MAGEB6P1A0A0J9YX57 407 aa29.18■■■□□ 2.26
TTC3-225ENST00000540756 ZBTB7AO95365 584 aa29.18■■■□□ 2.26
TTC3-225ENST00000540756 ZNF213O14771 459 aa29.17■■■□□ 2.26
TTC3-225ENST00000540756 ZBTB22O15209 634 aa29.17■■■□□ 2.26
TTC3-225ENST00000540756 CHST3Q7LGC8 479 aa29.17■■■□□ 2.26
TTC3-225ENST00000540756 IL27Q8NEV9 243 aa29.17■■■□□ 2.26
TTC3-225ENST00000540756 SDR42E1Q8WUS8 393 aa29.17■■■□□ 2.26
TTC3-225ENST00000540756 NFKBIBQ15653 356 aa29.16■■■□□ 2.26
TTC3-225ENST00000540756 ME3Q16798 604 aa29.16■■■□□ 2.26
TTC3-225ENST00000540756 NKX2-3Q8TAU0 364 aa29.16■■■□□ 2.26
TTC3-225ENST00000540756 WDR66Q8TBY9 1149 aa29.16■■■□□ 2.26
TTC3-225ENST00000540756 TBC1D10CQ8IV04 446 aa29.16■■■□□ 2.26
TTC3-225ENST00000540756 ANP32EQ9BTT0 268 aa29.16■■■□□ 2.26
TTC3-225ENST00000540756 SALL1Q9NSC2 1324 aa29.15■■■□□ 2.26
TTC3-225ENST00000540756 PKP1Q13835 747 aa29.15■■■□□ 2.26
TTC3-225ENST00000540756 Q6ZUG5 572 aa29.15■■■□□ 2.26
TTC3-225ENST00000540756 ST3GAL1Q11201 340 aa29.15■■■□□ 2.26
TTC3-225ENST00000540756 SLC16A10Q8TF71 515 aa29.15■■■□□ 2.26
TTC3-225ENST00000540756 INCENPQ9NQS7 918 aa29.15■■■□□ 2.26
TTC3-225ENST00000540756 C10orf71Q711Q0 1435 aa29.14■■■□□ 2.26
TTC3-225ENST00000540756 EXOSC10Q01780 885 aaKnown RBP29.14■■■□□ 2.26
TTC3-225ENST00000540756 ALX1Q15699 326 aa29.14■■■□□ 2.26
TTC3-225ENST00000540756 DHX32Q7L7V1 743 aaKnown RBP29.14■■■□□ 2.26
TTC3-225ENST00000540756 NAPBQ9H115 298 aa29.14■■■□□ 2.26
TTC3-225ENST00000540756 AATFQ9NY61 560 aaKnown RBP eCLIP29.14■■■□□ 2.26
TTC3-225ENST00000540756 LDHBP07195 334 aaKnown RBP29.13■■■□□ 2.25
TTC3-225ENST00000540756 DOK7Q18PE1 504 aa29.13■■■□□ 2.25
TTC3-225ENST00000540756 DZIP1Q86YF9 867 aaKnown RBP29.13■■■□□ 2.25
TTC3-225ENST00000540756 NECAB1Q8N987 351 aa29.13■■■□□ 2.25
TTC3-225ENST00000540756 ALDH8A1Q9H2A2 487 aaPredicted RBP29.13■■■□□ 2.25
TTC3-225ENST00000540756 ZC3H12CQ9C0D7 883 aaKnown RBP29.13■■■□□ 2.25
TTC3-225ENST00000540756 CIZ1Q9ULV3 898 aaPredicted RBP29.13■■■□□ 2.25
TTC3-225ENST00000540756 ATF5Q9Y2D1 282 aaPredicted RBP29.13■■■□□ 2.25
TTC3-225ENST00000540756 MAST2Q6P0Q8 1798 aa29.12■■■□□ 2.25
TTC3-225ENST00000540756 DIXDC1Q155Q3 683 aa29.12■■■□□ 2.25
TTC3-225ENST00000540756 CNKSR1Q969H4 720 aa29.12■■■□□ 2.25
TTC3-225ENST00000540756 TACC3Q9Y6A5 838 aa29.12■■■□□ 2.25
TTC3-225ENST00000540756 GNAT2P19087 354 aa29.11■■■□□ 2.25
TTC3-225ENST00000540756 CCDC83Q8IWF9 413 aa29.11■■■□□ 2.25
TTC3-225ENST00000540756 C7orf43Q8WVR3 580 aa29.11■■■□□ 2.25
TTC3-225ENST00000540756 INTS4Q96HW7 963 aaKnown RBP29.11■■■□□ 2.25
TTC3-225ENST00000540756 TMX4Q9H1E5 349 aaPredicted RBP29.11■■■□□ 2.25
TTC3-225ENST00000540756 BAZ2AQ9UIF9 1905 aaKnown RBP29.11■■■□□ 2.25
TTC3-225ENST00000540756 SMIM22K7EJ46 135 aa29.11■■■□□ 2.25
TTC3-225ENST00000540756 HMGB1P09429 215 aaKnown RBP29.11■■■□□ 2.25
TTC3-225ENST00000540756 CTDSPL2Q05D32 466 aa29.11■■■□□ 2.25
TTC3-225ENST00000540756 SPTY2D1Q68D10 685 aaPredicted RBP29.11■■■□□ 2.25
TTC3-225ENST00000540756 TDO2P48775 406 aa29.1■■■□□ 2.25
TTC3-225ENST00000540756 CWC22Q9HCG8 908 aaKnown RBP29.1■■■□□ 2.25
TTC3-225ENST00000540756 GPHNQ9NQX3 736 aaPredicted RBP29.1■■■□□ 2.25
TTC3-225ENST00000540756 GTF2IP78347 998 aa29.1■■■□□ 2.25
TTC3-225ENST00000540756 RAB3GAP1Q15042 981 aa29.1■■■□□ 2.25
TTC3-225ENST00000540756 BRF1Q92994 677 aa29.1■■■□□ 2.25
TTC3-225ENST00000540756 R3HDM1Q15032 1099 aaKnown RBP29.09■■■□□ 2.25
TTC3-225ENST00000540756 ANKRD1Q15327 319 aa29.09■■■□□ 2.25
TTC3-225ENST00000540756 MFSD14BQ5SR56 506 aa29.09■■■□□ 2.25
TTC3-225ENST00000540756 STK11IPQ8N1F8 1099 aa29.09■■■□□ 2.25
TTC3-225ENST00000540756 COA1Q9GZY4 146 aa29.09■■■□□ 2.25
TTC3-225ENST00000540756 ZMYM6O95789 1325 aa29.09■■■□□ 2.25
TTC3-225ENST00000540756 STK3Q13188 491 aa29.08■■■□□ 2.25
TTC3-225ENST00000540756 MB21D2Q8IYB1 491 aaPredicted RBP29.08■■■□□ 2.25
TTC3-225ENST00000540756 ZSCAN31Q96LW9 406 aaPredicted RBP29.08■■■□□ 2.25
TTC3-225ENST00000540756 MYH2Q9UKX2 1941 aa29.08■■■□□ 2.25
TTC3-225ENST00000540756 KCNA3P22001 575 aa29.08■■■□□ 2.25
TTC3-225ENST00000540756 NACAP1Q9BZK3 213 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms