RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0
LMO3-223ENST00000540590 ADD2P35612 726 aa15.08■□□□□ 0
LMO3-223ENST00000540590 IARSP41252 1262 aaKnown RBP15.08■□□□□ 0
LMO3-223ENST00000540590 GTF2IP78347 998 aa15.08■□□□□ 0
LMO3-223ENST00000540590 RASSF7Q02833 373 aa15.08■□□□□ 0
LMO3-223ENST00000540590 MAP3K12Q12852 859 aa15.08■□□□□ 0
LMO3-223ENST00000540590 SLFNL1Q499Z3 407 aa15.08■□□□□ 0
LMO3-223ENST00000540590 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
LMO3-223ENST00000540590 CWC27Q6UX04 472 aaKnown RBP15.08■□□□□ 0
LMO3-223ENST00000540590 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0
LMO3-223ENST00000540590 RUFY2Q8WXA3 655 aa15.08■□□□□ 0
LMO3-223ENST00000540590 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.08■□□□□ 0
LMO3-223ENST00000540590 LRP2BPQ9P2M1 347 aa15.08■□□□□ 0
LMO3-223ENST00000540590 SGSM2O43147 1006 aa15.07■□□□□ 0
LMO3-223ENST00000540590 PDE6AP16499 860 aa15.07■□□□□ 0
LMO3-223ENST00000540590 PRDX5P30044 214 aa15.07■□□□□ 0
LMO3-223ENST00000540590 ZMYM1Q5SVZ6 1142 aa15.07■□□□□ 0
LMO3-223ENST00000540590 SLC9C2Q5TAH2 1124 aa15.07■□□□□ 0
LMO3-223ENST00000540590 TBC1D22AQ8WUA7 517 aa15.07■□□□□ 0
LMO3-223ENST00000540590 KCNQ5Q9NR82 932 aa15.07■□□□□ 0
LMO3-223ENST00000540590 RAI14Q9P0K7 980 aa15.07■□□□□ 0
LMO3-223ENST00000540590 SUGT1Q9Y2Z0 365 aa15.07■□□□□ 0
LMO3-223ENST00000540590 YDJCA8MPS7 323 aa15.06■□□□□ 0
LMO3-223ENST00000540590 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
LMO3-223ENST00000540590 MFAP1P55081 439 aaKnown RBP15.06■□□□□ 0
LMO3-223ENST00000540590 GRIK5Q16478 980 aa15.06■□□□□ 0
LMO3-223ENST00000540590 SPTY2D1Q68D10 685 aaPredicted RBP15.06■□□□□ 0
LMO3-223ENST00000540590 ERICH6Q7L0X2 663 aa15.06■□□□□ 0
LMO3-223ENST00000540590 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
LMO3-223ENST00000540590 APPBP2Q92624 585 aa15.06■□□□□ 0
LMO3-223ENST00000540590 FBXW7Q969H0 707 aa15.06■□□□□ 0
LMO3-223ENST00000540590 SEC62Q99442 399 aaKnown RBP15.06■□□□□ 0
LMO3-223ENST00000540590 RAD50Q92878 1312 aa15.06■□□□□ 0
LMO3-223ENST00000540590 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
LMO3-223ENST00000540590 TCRBV5S4A2TA0A5A2 114 aa15.05■□□□□ -0
LMO3-223ENST00000540590 LDHBP07195 334 aaKnown RBP15.05■□□□□ -0
LMO3-223ENST00000540590 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -0
LMO3-223ENST00000540590 MMP14P50281 582 aa15.05■□□□□ -0
LMO3-223ENST00000540590 PRELPP51888 382 aa15.05■□□□□ -0
LMO3-223ENST00000540590 FKBP1AP62942 108 aaKnown RBP15.05■□□□□ -0
LMO3-223ENST00000540590 UBE3CQ15386 1083 aa15.05■□□□□ -0
LMO3-223ENST00000540590 MFSD14BQ5SR56 506 aa15.05■□□□□ -0
LMO3-223ENST00000540590 TTLL5Q6EMB2 1281 aa15.05■□□□□ -0
LMO3-223ENST00000540590 NIM1KQ8IY84 436 aa15.05■□□□□ -0
LMO3-223ENST00000540590 ZNF384Q8TF68 577 aa15.05■□□□□ -0
LMO3-223ENST00000540590 OSBP2Q969R2 916 aa15.05■□□□□ -0
LMO3-223ENST00000540590 HELLSQ9NRZ9 838 aa15.05■□□□□ -0
LMO3-223ENST00000540590 MAST3O60307 1309 aa15.05■□□□□ -0
LMO3-223ENST00000540590 M0R2C6 588 aa15.04■□□□□ -0
LMO3-223ENST00000540590 MECOMQ03112 1051 aa15.04■□□□□ -0
LMO3-223ENST00000540590 MCMDC2Q4G0Z9 681 aa15.04■□□□□ -0
LMO3-223ENST00000540590 STRIP1Q5VSL9 837 aa15.04■□□□□ -0
LMO3-223ENST00000540590 CCDC129Q6ZRS4 1044 aa15.04■□□□□ -0
LMO3-223ENST00000540590 ARHGAP27Q6ZUM4 889 aa15.04■□□□□ -0
LMO3-223ENST00000540590 ZNF589Q86UQ0 364 aaPredicted RBP15.04■□□□□ -0
LMO3-223ENST00000540590 CERS3Q8IU89 383 aa15.04■□□□□ -0
LMO3-223ENST00000540590 CERS5Q8N5B7 392 aa15.04■□□□□ -0
LMO3-223ENST00000540590 NSUN4Q96CB9 384 aaKnown RBP15.04■□□□□ -0
LMO3-223ENST00000540590 MXD3Q9BW11 206 aa15.04■□□□□ -0
LMO3-223ENST00000540590 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
LMO3-223ENST00000540590 USP17L3A6NCW0 530 aa15.03■□□□□ -0
LMO3-223ENST00000540590 USP17L4A6NCW7 530 aa15.03■□□□□ -0
LMO3-223ENST00000540590 REC8O95072 547 aa15.03■□□□□ -0
LMO3-223ENST00000540590 CYP7A1P22680 504 aa15.03■□□□□ -0
LMO3-223ENST00000540590 DACT2Q5SW24 774 aa15.03■□□□□ -0
LMO3-223ENST00000540590 NAA16Q6N069 864 aaPredicted RBP15.03■□□□□ -0
LMO3-223ENST00000540590 USP17L1Q7RTZ2 530 aa15.03■□□□□ -0
LMO3-223ENST00000540590 PUS7LQ9H0K6 701 aaKnown RBP15.03■□□□□ -0
LMO3-223ENST00000540590 ZNRF3Q9ULT6 936 aa15.03■□□□□ -0
LMO3-223ENST00000540590 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
LMO3-223ENST00000540590 CCDC171Q6TFL3 1326 aa15.02■□□□□ -0
LMO3-223ENST00000540590 MYO3BQ8WXR4 1341 aa15.02■□□□□ -0
LMO3-223ENST00000540590 ADGRA1Q86SQ6 560 aa15.02■□□□□ -0
LMO3-223ENST00000540590 DZIP1Q86YF9 867 aaKnown RBP15.02■□□□□ -0
LMO3-223ENST00000540590 JDP2Q8WYK2 163 aa15.02■□□□□ -0
LMO3-223ENST00000540590 ANO2Q9NQ90 1003 aa15.02■□□□□ -0
LMO3-223ENST00000540590 CDK5RAP2Q96SN8 1893 aa15.01□□□□□ -0.01
LMO3-223ENST00000540590 RAD17O75943 681 aa15.01□□□□□ -0.01
LMO3-223ENST00000540590 SLF2Q8IX21 1173 aa15.01□□□□□ -0.01
LMO3-223ENST00000540590 LSG1Q9H089 658 aaKnown RBP15.01□□□□□ -0.01
LMO3-223ENST00000540590 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
LMO3-223ENST00000540590 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
LMO3-223ENST00000540590 PSMD14O00487 310 aa15□□□□□ -0.01
LMO3-223ENST00000540590 GPAA1O43292 621 aa15□□□□□ -0.01
LMO3-223ENST00000540590 PTH1RQ03431 593 aa15□□□□□ -0.01
LMO3-223ENST00000540590 DIXDC1Q155Q3 683 aa15□□□□□ -0.01
LMO3-223ENST00000540590 KIAA1211Q6ZU35 1233 aa15□□□□□ -0.01
LMO3-223ENST00000540590 USP26Q9BXU7 913 aa15□□□□□ -0.01
LMO3-223ENST00000540590 F8W031 263 aaPredicted RBP14.99□□□□□ -0.01
LMO3-223ENST00000540590 GRIN3BO60391 1043 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 MBD4O95243 580 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 VIL1P09327 827 aaKnown RBP14.99□□□□□ -0.01
LMO3-223ENST00000540590 LMNB1P20700 586 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 GSTO1P78417 241 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 CXCL9Q07325 125 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 MIGA1Q8NAN2 632 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 AIDAQ96BJ3 306 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 MRIQ9BWK5 157 aa14.99□□□□□ -0.01
LMO3-223ENST00000540590 TTF2Q9UNY4 1162 aaKnown RBP14.99□□□□□ -0.01
LMO3-223ENST00000540590 ECM29Q5VYK3 1845 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms