RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 SPRYD3Q8NCJ5 442 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 AGBL3Q8NEM8 1001 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 COA1Q9GZY4 146 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 CWC22Q9HCG8 908 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 CNNM1Q9NRU3 951 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 CNTNAP1P78357 1384 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 SNAP23O00161 211 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 CD2BP2O95400 341 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 EGFRP00533 1210 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 CST9Q5W186 159 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 CWC27Q6UX04 472 aaKnown RBP14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 USP48Q86UV5 1035 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 ZNF408Q9H9D4 720 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 SNRKQ9NRH2 765 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 AKAP2Q9Y2D5 859 aa14.34□□□□□ -0.11
CYB561A3-215ENST00000540317 CELF2O95319 508 aaKnown RBP14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 USP17L8P0C7I0 530 aa14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 KLRK1P26718 216 aa14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 VEGFBP49765 207 aa14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 PAXIP1Q6ZW49 1069 aaPredicted RBP14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 DCPSQ96C86 337 aaKnown RBP14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 LSG1Q9H089 658 aaKnown RBP14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 BOLA2Q9H3K6 86 aa14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 TLR7Q9NYK1 1049 aaKnown RBP14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 DBNLQ9UJU6 430 aaKnown RBP14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.33□□□□□ -0.12
CYB561A3-215ENST00000540317 FRAT2O75474 233 aaPredicted RBP14.32□□□□□ -0.12
CYB561A3-215ENST00000540317 GRM1Q13255 1194 aa14.32□□□□□ -0.12
CYB561A3-215ENST00000540317 KIF4BQ2VIQ3 1234 aa14.32□□□□□ -0.12
CYB561A3-215ENST00000540317 KRT26Q7Z3Y9 468 aa14.32□□□□□ -0.12
CYB561A3-215ENST00000540317 HAUS7Q99871 368 aa14.32□□□□□ -0.12
CYB561A3-215ENST00000540317 FSD1Q9BTV5 496 aa14.32□□□□□ -0.12
CYB561A3-215ENST00000540317 CEP126Q9P2H0 1117 aa14.32□□□□□ -0.12
CYB561A3-215ENST00000540317 RASSF10A6NK89 507 aa14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 HSPA1AP0DMV8 641 aaKnown RBP14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 HSPA1BP0DMV9 641 aaKnown RBP14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 NEK4P51957 841 aa14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 STRIP1Q5VSL9 837 aa14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 TTLL5Q6EMB2 1281 aa14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 OGFOD1Q8N543 542 aa14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 MXD3Q9BW11 206 aa14.31□□□□□ -0.12
CYB561A3-215ENST00000540317 ZNF280AP59817 542 aaPredicted RBP14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 SCARF1Q14162 830 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 DACT2Q5SW24 774 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 DLK2Q6UY11 383 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 GMLQ99445 158 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 SPEF2Q9C093 1822 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 PTMSP20962 102 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 GTF2IP78347 998 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 SULF1Q8IWU6 871 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 KCNB2Q92953 911 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 DBNDD2Q9BQY9 259 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 PUS3Q9BZE2 481 aaKnown RBP14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 CD209Q9NNX6 404 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 MYOZ2Q9NPC6 264 aa14.3□□□□□ -0.12
CYB561A3-215ENST00000540317 SCN9AQ15858 1988 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 ZNF609O15014 1411 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 NUCB2P80303 420 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 RAB3GAP1Q15042 981 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 ZNF804AQ7Z570 1209 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 IL25Q9H293 177 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 GGA3Q9NZ52 723 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 TLL2Q9Y6L7 1015 aa14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
CYB561A3-215ENST00000540317 ZKSCAN1P17029 563 aaPredicted RBP14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 LRRFIP1Q32MZ4 808 aaKnown RBP14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 LRRC24Q50LG9 513 aa14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 ANGEL2Q5VTE6 544 aaKnown RBP14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 SAPCD2Q86UD0 394 aa14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 GBP4Q96PP9 640 aa14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 TM6SF1Q9BZW5 370 aa14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 PALD1Q9ULE6 856 aa14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 CCDC171Q6TFL3 1326 aa14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 MYO3BQ8WXR4 1341 aa14.28□□□□□ -0.12
CYB561A3-215ENST00000540317 DDX11L8A8MPP1 907 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 ADM5C9JUS6 153 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 ECE1P42892 770 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 CCDC158Q5M9N0 1113 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 RNF20Q5VTR2 975 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 CYP4F22Q6NT55 531 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 C15orf52Q6ZUT6 534 aaKnown RBP14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 KIAA0825Q8IV33 1275 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 MAP4K1Q92918 833 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 INTS4Q96HW7 963 aaKnown RBP14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 CAPNS2Q96L46 248 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 SNX14Q9Y5W7 946 aa14.27□□□□□ -0.12
CYB561A3-215ENST00000540317 A0A1B0GUL7 405 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 MCM4P33991 863 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 KBTBD3Q8NAB2 608 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 AIDAQ96BJ3 306 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 RIPOR2Q9Y4F9 1068 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 TIMM10P62072 90 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 CUL4AQ13619 759 aa14.26□□□□□ -0.13
CYB561A3-215ENST00000540317 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms