RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 GNG11P61952 73 aa11.88□□□□□ -0.51
GPD2-213ENST00000540309 AMOTQ4VCS5 1084 aa11.88□□□□□ -0.51
GPD2-213ENST00000540309 BEND6Q5SZJ8 279 aaPredicted RBP11.88□□□□□ -0.51
GPD2-213ENST00000540309 PPM1EQ8WY54 764 aa11.88□□□□□ -0.51
GPD2-213ENST00000540309 ERCC4Q92889 916 aaPredicted RBP11.88□□□□□ -0.51
GPD2-213ENST00000540309 SUCLG2Q96I99 432 aa11.88□□□□□ -0.51
GPD2-213ENST00000540309 PANX2Q96RD6 677 aa11.88□□□□□ -0.51
GPD2-213ENST00000540309 BICC1Q9H694 974 aaKnown RBP11.88□□□□□ -0.51
GPD2-213ENST00000540309 GPR108Q9NPR9 543 aa11.88□□□□□ -0.51
GPD2-213ENST00000540309 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.88□□□□□ -0.51
GPD2-213ENST00000540309 MYO1AQ9UBC5 1043 aa11.88□□□□□ -0.51
GPD2-213ENST00000540309 SEC31AO94979 1220 aaKnown RBP11.87□□□□□ -0.51
GPD2-213ENST00000540309 MCM3P25205 808 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 CFAP100Q494V2 611 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 ARHGEF25Q86VW2 580 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 TRIML1Q8N9V2 468 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 DDX21Q9NR30 783 aaKnown RBP eCLIP11.87□□□□□ -0.51
GPD2-213ENST00000540309 CDC23Q9UJX2 597 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 L1RE1Q9UN81 338 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 SLIT3O75094 1523 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 LTN1O94822 1766 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 LMOD1P29536 600 aaPredicted RBP11.87□□□□□ -0.51
GPD2-213ENST00000540309 TEFQ10587 303 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 SUGP1Q8IWZ8 645 aaKnown RBP11.87□□□□□ -0.51
GPD2-213ENST00000540309 C8orf76Q96K31 380 aa11.87□□□□□ -0.51
GPD2-213ENST00000540309 BTBD11A6QL63 1104 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 CUTAO60888 179 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 CCDC175P0C221 793 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 FDPSP14324 419 aaKnown RBP11.86□□□□□ -0.51
GPD2-213ENST00000540309 PFKFB1P16118 471 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 SYKP43405 635 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 LMAN1P49257 510 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 CHMP4BP1P59074 171 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 PIP4K2BP78356 416 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
GPD2-213ENST00000540309 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 NT5DC1Q5TFE4 455 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 STOX1Q6ZVD7 989 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
GPD2-213ENST00000540309 ENOX1Q8TC92 643 aaKnown RBP11.86□□□□□ -0.51
GPD2-213ENST00000540309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPD2-213ENST00000540309 FTOQ9C0B1 505 aaKnown RBP eCLIP11.86□□□□□ -0.51
GPD2-213ENST00000540309 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
GPD2-213ENST00000540309 GUCY2CP25092 1073 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 CORO7P57737 925 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 SWT1Q5T5J6 900 aaKnown RBP11.85□□□□□ -0.51
GPD2-213ENST00000540309 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 CCDC51Q96ER9 411 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 FMNL2Q96PY5 1086 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 ZCCHC17Q9NP64 241 aaKnown RBP11.85□□□□□ -0.51
GPD2-213ENST00000540309 TLR7Q9NYK1 1049 aaKnown RBP11.85□□□□□ -0.51
GPD2-213ENST00000540309 IQSEC3Q9UPP2 1182 aaPredicted RBP11.85□□□□□ -0.51
GPD2-213ENST00000540309 E7EWF7 191 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 DTNBO60941 627 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 ZNF18P17022 549 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 FECHP22830 423 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 NEXNQ0ZGT2 675 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 WHAMMP3Q1A5X7 153 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 PLEKHO1Q53GL0 409 aaPredicted RBP11.85□□□□□ -0.51
GPD2-213ENST00000540309 HSP90B2PQ58FF3 399 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 ZMYM1Q5SVZ6 1142 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 WDR93Q6P2C0 686 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 EFCAB13Q8IY85 973 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 C10orf67Q8IYJ2 551 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 TC2NQ8N9U0 490 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 IP6K1Q92551 441 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 WDR24Q96S15 920 aa11.85□□□□□ -0.51
GPD2-213ENST00000540309 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
GPD2-213ENST00000540309 WDR17Q8IZU2 1322 aa11.84□□□□□ -0.51
GPD2-213ENST00000540309 ATP1A3P13637 1013 aa11.84□□□□□ -0.51
GPD2-213ENST00000540309 AARSP49588 968 aaKnown RBP eCLIP11.84□□□□□ -0.51
GPD2-213ENST00000540309 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
GPD2-213ENST00000540309 GNL2Q13823 731 aaKnown RBP11.84□□□□□ -0.51
GPD2-213ENST00000540309 TTC31Q49AM3 519 aaPredicted RBP11.84□□□□□ -0.51
GPD2-213ENST00000540309 RESP18Q5W5W9 173 aa11.84□□□□□ -0.51
GPD2-213ENST00000540309 CCDC102BQ68D86 513 aa11.84□□□□□ -0.51
GPD2-213ENST00000540309 NUTM2AQ8IVF1 878 aaPredicted RBP11.84□□□□□ -0.51
GPD2-213ENST00000540309 NGDNQ8NEJ9 315 aaKnown RBP11.84□□□□□ -0.51
GPD2-213ENST00000540309 CLIC4Q9Y696 253 aa11.84□□□□□ -0.51
GPD2-213ENST00000540309 RGPD8O14715 1765 aaPredicted RBP11.84□□□□□ -0.51
GPD2-213ENST00000540309 H3BQF6 201 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 KIF5CO60282 957 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 RFX5P48382 616 aaPredicted RBP11.83□□□□□ -0.52
GPD2-213ENST00000540309 GTF2A1P52655 376 aaPredicted RBP11.83□□□□□ -0.52
GPD2-213ENST00000540309 NLRP6P59044 892 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 KIF23Q02241 960 aaPredicted RBP11.83□□□□□ -0.52
GPD2-213ENST00000540309 KDM6AO15550 1401 aaPredicted RBP11.83□□□□□ -0.52
GPD2-213ENST00000540309 TNRQ92752 1358 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 CAMTA1Q9Y6Y1 1673 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 A6NNZ2 444 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 SEMA3EO15041 775 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 PPFIA4O75335 1185 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 CDKL5O76039 1030 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 ERCC5P28715 1186 aaPredicted RBP11.83□□□□□ -0.52
GPD2-213ENST00000540309 CWF19L2Q2TBE0 894 aaKnown RBP11.83□□□□□ -0.52
GPD2-213ENST00000540309 TUBB8Q3ZCM7 444 aa11.83□□□□□ -0.52
GPD2-213ENST00000540309 KANK3Q6NY19 840 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms