RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 MRPL50Q8N5N7 158 aaKnown RBP17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 PTPN18Q99952 460 aa17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 TMEM39BQ9GZU3 492 aa17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 TRIM17Q9Y577 477 aa17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 MKI67P46013 3256 aaKnown RBP17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 AK9Q5TCS8 1911 aa17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 UTYO14607 1347 aa17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 ZNF521Q96K83 1311 aa17.98■□□□□ 0.47
SEMA4D-222ENST00000540183 KIAA0100Q14667 2235 aaKnown RBP17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 CRKP46108 304 aa17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 INHBEP58166 350 aa17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 OTOP1Q7RTM1 612 aa17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 ANKRD13AQ8IZ07 590 aa17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 CD99L2Q8TCZ2 262 aa17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 SERPINA10Q9UK55 444 aa17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 BRCA2P51587 3418 aa17.97■□□□□ 0.47
SEMA4D-222ENST00000540183 CACNB3P54284 484 aa17.96■□□□□ 0.47
SEMA4D-222ENST00000540183 RABL6Q3YEC7 729 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-222ENST00000540183 FBXO33Q7Z6M2 555 aa17.96■□□□□ 0.47
SEMA4D-222ENST00000540183 OPTNQ96CV9 577 aa17.96■□□□□ 0.47
SEMA4D-222ENST00000540183 MROH5Q6ZUA9 1318 aa17.96■□□□□ 0.46
SEMA4D-222ENST00000540183 METTL24Q5JXM2 366 aa17.95■□□□□ 0.46
SEMA4D-222ENST00000540183 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.95■□□□□ 0.46
SEMA4D-222ENST00000540183 VGLL2Q8N8G2 317 aa17.95■□□□□ 0.46
SEMA4D-222ENST00000540183 UNCXA6NJT0 531 aa17.94■□□□□ 0.46
SEMA4D-222ENST00000540183 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
SEMA4D-222ENST00000540183 PRPF38BQ5VTL8 546 aaKnown RBP17.94■□□□□ 0.46
SEMA4D-222ENST00000540183 MS4A4AQ96JQ5 239 aa17.94■□□□□ 0.46
SEMA4D-222ENST00000540183 TESPA1A2RU30 521 aaPredicted RBP17.93■□□□□ 0.46
SEMA4D-222ENST00000540183 POTEFA5A3E0 1075 aa17.93■□□□□ 0.46
SEMA4D-222ENST00000540183 BCAMP50895 628 aa17.93■□□□□ 0.46
SEMA4D-222ENST00000540183 VGLL4Q14135 290 aa17.93■□□□□ 0.46
SEMA4D-222ENST00000540183 VPS37DQ86XT2 251 aa17.93■□□□□ 0.46
SEMA4D-222ENST00000540183 BRI3BPQ8WY22 251 aa17.93■□□□□ 0.46
SEMA4D-222ENST00000540183 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.92■□□□□ 0.46
SEMA4D-222ENST00000540183 SSH1Q8WYL5 1049 aa17.92■□□□□ 0.46
SEMA4D-222ENST00000540183 FRAT2O75474 233 aaPredicted RBP17.91■□□□□ 0.46
SEMA4D-222ENST00000540183 PDE8BO95263 885 aa17.91■□□□□ 0.46
SEMA4D-222ENST00000540183 OTUD7BQ6GQQ9 843 aa17.91■□□□□ 0.46
SEMA4D-222ENST00000540183 OTUD5Q96G74 571 aa17.91■□□□□ 0.46
SEMA4D-222ENST00000540183 ERO1AQ96HE7 468 aa17.91■□□□□ 0.46
SEMA4D-222ENST00000540183 USP44Q9H0E7 712 aa17.91■□□□□ 0.46
SEMA4D-222ENST00000540183 PTPN22Q9Y2R2 807 aa17.91■□□□□ 0.46
SEMA4D-222ENST00000540183 CCL15-CCL14A0A0B4J2E2 113 aa17.9■□□□□ 0.46
SEMA4D-222ENST00000540183 TNNI2P48788 182 aa17.9■□□□□ 0.46
SEMA4D-222ENST00000540183 MAP3K9P80192 1104 aa17.9■□□□□ 0.46
SEMA4D-222ENST00000540183 CCL15Q16663 113 aa17.9■□□□□ 0.46
SEMA4D-222ENST00000540183 CAVIN4Q5BKX8 364 aa17.9■□□□□ 0.46
SEMA4D-222ENST00000540183 TEKT1Q969V4 418 aa17.9■□□□□ 0.46
SEMA4D-222ENST00000540183 FGFR2P21802 821 aa17.89■□□□□ 0.45
SEMA4D-222ENST00000540183 RFX5P48382 616 aaPredicted RBP17.89■□□□□ 0.45
SEMA4D-222ENST00000540183 SP3Q02447 781 aa17.89■□□□□ 0.45
SEMA4D-222ENST00000540183 FAM43AQ8N2R8 423 aa17.89■□□□□ 0.45
SEMA4D-222ENST00000540183 EFCC1Q9HA90 598 aa17.89■□□□□ 0.45
SEMA4D-222ENST00000540183 SNCAIPQ9Y6H5 919 aa17.89■□□□□ 0.45
SEMA4D-222ENST00000540183 PTPRCP08575 1304 aa17.89■□□□□ 0.45
SEMA4D-222ENST00000540183 MYH2Q9UKX2 1941 aa17.88■□□□□ 0.45
SEMA4D-222ENST00000540183 TAF1CQ15572 869 aaPredicted RBP17.88■□□□□ 0.45
SEMA4D-222ENST00000540183 APOBEC3HQ6NTF7 200 aaKnown RBP17.88■□□□□ 0.45
SEMA4D-222ENST00000540183 TBC1D22AQ8WUA7 517 aa17.88■□□□□ 0.45
SEMA4D-222ENST00000540183 ZKSCAN4Q969J2 545 aaPredicted RBP17.88■□□□□ 0.45
SEMA4D-222ENST00000540183 CSADQ9Y600 493 aa17.88■□□□□ 0.45
SEMA4D-222ENST00000540183 HDLBPQ00341 1268 aaKnown RBP17.87■□□□□ 0.45
SEMA4D-222ENST00000540183 ZDHHC15Q96MV8 337 aa17.87■□□□□ 0.45
SEMA4D-222ENST00000540183 DOCK2Q92608 1830 aa17.86■□□□□ 0.45
SEMA4D-222ENST00000540183 EN2P19622 333 aaPredicted RBP17.86■□□□□ 0.45
SEMA4D-222ENST00000540183 GTF2A2P52657 109 aa17.86■□□□□ 0.45
SEMA4D-222ENST00000540183 PUM3Q15397 648 aaKnown RBP17.86■□□□□ 0.45
SEMA4D-222ENST00000540183 CDCA7LQ96GN5 454 aa17.86■□□□□ 0.45
SEMA4D-222ENST00000540183 WRNIP1Q96S55 665 aa17.86■□□□□ 0.45
SEMA4D-222ENST00000540183 SPDYE5A6NIY4 337 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 EYA2O00167 538 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 SLFN5Q08AF3 891 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 MIGA2Q7L4E1 593 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 ATG9AQ7Z3C6 839 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 ARMC5Q96C12 935 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 ARHGAP39Q9C0H5 1083 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 ZFYVE28Q9HCC9 887 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 PTCH2Q9Y6C5 1203 aa17.85■□□□□ 0.45
SEMA4D-222ENST00000540183 BTBD19C9JJ37 291 aa17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 E9PSI1 815 aa17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 ECM2O94769 699 aaPredicted RBP17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 IFIT1P09914 478 aaKnown RBP17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 DIXDC1Q155Q3 683 aa17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 INTS3Q68E01 1043 aaKnown RBP17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 SIL1Q9H173 461 aa17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 TMOD2Q9NZR1 351 aa17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 MGAMO43451 1857 aa17.84■□□□□ 0.45
SEMA4D-222ENST00000540183 KIF16BQ96L93 1317 aa17.83■□□□□ 0.44
SEMA4D-222ENST00000540183 IRF6O14896 467 aa17.83■□□□□ 0.44
SEMA4D-222ENST00000540183 SLC5A1P13866 664 aa17.83■□□□□ 0.44
SEMA4D-222ENST00000540183 INPP5BP32019 993 aa17.83■□□□□ 0.44
SEMA4D-222ENST00000540183 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.44
SEMA4D-222ENST00000540183 FAM83AQ86UY5 434 aa17.83■□□□□ 0.44
SEMA4D-222ENST00000540183 MRIQ9BWK5 157 aa17.83■□□□□ 0.44
SEMA4D-222ENST00000540183 MAST3O60307 1309 aa17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 MYCP01106 439 aaPredicted RBP17.82■□□□□ 0.44
SEMA4D-222ENST00000540183 TCP10Q12799 353 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms