RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 FAM177A1Q8N128 213 aaPredicted RBP10.06□□□□□ -0.8
DDB1-217ENST00000540166 SLC4A9Q96Q91 983 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 NMRK2Q9NPI5 230 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 CNNM1Q9NRU3 951 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 CWC25Q9NXE8 425 aaPredicted RBP10.06□□□□□ -0.8
DDB1-217ENST00000540166 CCDC69A6NI79 296 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 SYT1P21579 422 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 CYP2C19P33261 490 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 NF2P35240 595 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 TNIP1Q15025 636 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 DNAJC25Q9H1X3 360 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 DACT1Q9NYF0 836 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 ABCA3Q99758 1704 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 LMO7Q8WWI1 1683 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 PARP4Q9UKK3 1724 aaKnown RBP10.06□□□□□ -0.8
DDB1-217ENST00000540166 ERVV-1B6SEH8 477 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 SFPQP23246 707 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDB1-217ENST00000540166 BRD2P25440 801 aaKnown RBP10.06□□□□□ -0.8
DDB1-217ENST00000540166 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
DDB1-217ENST00000540166 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 MYO1CO00159 1063 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 IRS4O14654 1257 aaPredicted RBP10.05□□□□□ -0.8
DDB1-217ENST00000540166 ZNF853P0CG23 659 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 ICE2Q659A1 982 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 STYK1Q6J9G0 422 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 CHMP4CQ96CF2 233 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 CCDC34Q96HJ3 373 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 CBX8Q9HC52 389 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 KDRP35968 1356 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 EIF3JO75822 258 aaKnown RBP10.05□□□□□ -0.8
DDB1-217ENST00000540166 CHMLP26374 656 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 GSDMDP57764 484 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
DDB1-217ENST00000540166 SCAND2PQ9GZW5 306 aaPredicted RBP10.05□□□□□ -0.8
DDB1-217ENST00000540166 ARFGAP3Q9NP61 516 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 BABAM1Q9NWV8 329 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 HACL1Q9UJ83 578 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 PALD1Q9ULE6 856 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 ATP10DQ9P241 1426 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 SRGAP3O43295 1099 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 DTNBO60941 627 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 WDHD1O75717 1129 aaPredicted RBP10.05□□□□□ -0.8
DDB1-217ENST00000540166 CAPN15O75808 1086 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 CAPN2P17655 700 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 GJB2P29033 226 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 APLP1P51693 650 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 FLIIQ13045 1269 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 ACBD3Q9H3P7 528 aa10.05□□□□□ -0.8
DDB1-217ENST00000540166 LRRC37A3O60309 1634 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 LOC102724159A0A0B4J2E5 919 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 KINO60870 393 aaKnown RBP10.04□□□□□ -0.8
DDB1-217ENST00000540166 CAVIN2O95810 425 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 USP8P40818 1118 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 CUL4AQ13619 759 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 PWP2Q15269 919 aaKnown RBP10.04□□□□□ -0.8
DDB1-217ENST00000540166 CCDC57Q2TAC2 916 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 BANK1Q8NDB2 785 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 FAM89AQ96GI7 184 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 CHL1O00533 1208 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 BBOX1O75936 387 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 IFIT2P09913 472 aaKnown RBP10.04□□□□□ -0.8
DDB1-217ENST00000540166 CCDC91Q7Z6B0 441 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
DDB1-217ENST00000540166 DNAI1Q9UI46 699 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 OAS2P29728 719 aaKnown RBP10.04□□□□□ -0.8
DDB1-217ENST00000540166 SDF4Q9BRK5 362 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
DDB1-217ENST00000540166 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 RGPD5Q99666 1765 aa10.04□□□□□ -0.8
DDB1-217ENST00000540166 JAKMIP1Q96N16 626 aaKnown RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 HDAC9Q9UKV0 1011 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 CAMTA2O94983 1202 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 CALRP27797 417 aaKnown RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 TCIRG1Q13488 830 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 PNMA8AQ86V59 439 aaPredicted RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 CEP57L1Q8IYX8 460 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 CLASRPQ8N2M8 674 aaKnown RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 DNAAF4Q8WXU2 420 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 JRKLQ9Y4A0 524 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 KDM6AO15550 1401 aaPredicted RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 DHX16O60231 1041 aaKnown RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 MNAT1P51948 309 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 CEBPZQ03701 1054 aaKnown RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 DHX8Q14562 1220 aaKnown RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 HLFQ16534 295 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 WASHC4Q2M389 1173 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 SLFNL1Q499Z3 407 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 ZSCAN31Q96LW9 406 aaPredicted RBP10.03□□□□□ -0.8
DDB1-217ENST00000540166 CYP46A1Q9Y6A2 500 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 PLEKHG2Q9H7P9 1386 aa10.03□□□□□ -0.8
DDB1-217ENST00000540166 PNMA6AP0CW24 399 aaPredicted RBP10.02□□□□□ -0.8
DDB1-217ENST00000540166 HSPA6P17066 643 aa10.02□□□□□ -0.8
DDB1-217ENST00000540166 IARSP41252 1262 aaKnown RBP10.02□□□□□ -0.8
DDB1-217ENST00000540166 SF3A1Q15459 793 aaKnown RBP10.02□□□□□ -0.8
DDB1-217ENST00000540166 CIAPIN1Q6FI81 312 aa10.02□□□□□ -0.8
DDB1-217ENST00000540166 CCDC102AQ96A19 550 aa10.02□□□□□ -0.8
DDB1-217ENST00000540166 RRP15Q9Y3B9 282 aaKnown RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms