RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 GCC1Q96CN9 775 aa27.03■■□□□ 1.92
TRIM65-202ENST00000540128 PRMT6Q96LA8 375 aaPredicted RBP27.03■■□□□ 1.92
TRIM65-202ENST00000540128 PITPNM2Q9BZ72 1349 aa27.03■■□□□ 1.92
TRIM65-202ENST00000540128 SMARCA5O60264 1052 aaPredicted RBP27.02■■□□□ 1.92
TRIM65-202ENST00000540128 LDHBP07195 334 aaKnown RBP27.02■■□□□ 1.92
TRIM65-202ENST00000540128 HSPA6P17066 643 aa27.02■■□□□ 1.92
TRIM65-202ENST00000540128 PRDX5P30044 214 aa27.02■■□□□ 1.92
TRIM65-202ENST00000540128 ANGEL2Q5VTE6 544 aaKnown RBP27.02■■□□□ 1.92
TRIM65-202ENST00000540128 SPTY2D1Q68D10 685 aaPredicted RBP27.02■■□□□ 1.92
TRIM65-202ENST00000540128 HHIPL2Q6UWX4 724 aa27.02■■□□□ 1.92
TRIM65-202ENST00000540128 GGA3Q9NZ52 723 aa27.02■■□□□ 1.92
TRIM65-202ENST00000540128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.01■■□□□ 1.91
TRIM65-202ENST00000540128 TEKT1Q969V4 418 aa27.01■■□□□ 1.91
TRIM65-202ENST00000540128 ZDHHC15Q96MV8 337 aa27.01■■□□□ 1.91
TRIM65-202ENST00000540128 PCDHAC2Q9Y5I4 1007 aa27.01■■□□□ 1.91
TRIM65-202ENST00000540128 AKAP11Q9UKA4 1901 aa27■■□□□ 1.91
TRIM65-202ENST00000540128 IGSF3O75054 1194 aa27■■□□□ 1.91
TRIM65-202ENST00000540128 KRT26Q7Z3Y9 468 aa27■■□□□ 1.91
TRIM65-202ENST00000540128 GLIS2Q9BZE0 524 aaPredicted RBP27■■□□□ 1.91
TRIM65-202ENST00000540128 POLR2AP24928 1970 aaKnown RBP27■■□□□ 1.91
TRIM65-202ENST00000540128 APLP1P51693 650 aa26.99■■□□□ 1.91
TRIM65-202ENST00000540128 USP48Q86UV5 1035 aa26.99■■□□□ 1.91
TRIM65-202ENST00000540128 SMC5Q8IY18 1101 aa26.99■■□□□ 1.91
TRIM65-202ENST00000540128 SNRKQ9NRH2 765 aa26.99■■□□□ 1.91
TRIM65-202ENST00000540128 ABCF2Q9UG63 623 aa26.99■■□□□ 1.91
TRIM65-202ENST00000540128 IGHDP01880 384 aa26.98■■□□□ 1.91
TRIM65-202ENST00000540128 CYP2E1P05181 493 aaPredicted RBP26.98■■□□□ 1.91
TRIM65-202ENST00000540128 RBM5P52756 815 aaKnown RBP eCLIP26.98■■□□□ 1.91
TRIM65-202ENST00000540128 TBC1D9Q6ZT07 1266 aa26.98■■□□□ 1.91
TRIM65-202ENST00000540128 ERICH6Q7L0X2 663 aa26.98■■□□□ 1.91
TRIM65-202ENST00000540128 SULF1Q8IWU6 871 aa26.98■■□□□ 1.91
TRIM65-202ENST00000540128 FAM163AQ96GL9 167 aaPredicted RBP26.98■■□□□ 1.91
TRIM65-202ENST00000540128 TRAF5O00463 557 aa26.97■■□□□ 1.91
TRIM65-202ENST00000540128 MYO1BO43795 1136 aa26.97■■□□□ 1.91
TRIM65-202ENST00000540128 ZAP70P43403 619 aa26.97■■□□□ 1.91
TRIM65-202ENST00000540128 APOBEC3HQ6NTF7 200 aaKnown RBP26.97■■□□□ 1.91
TRIM65-202ENST00000540128 AOX1Q06278 1338 aa26.96■■□□□ 1.91
TRIM65-202ENST00000540128 ATP5JP18859 108 aa26.96■■□□□ 1.91
TRIM65-202ENST00000540128 SPDYE2Q495Y8 402 aa26.95■■□□□ 1.9
TRIM65-202ENST00000540128 APOBEC3FQ8IUX4 373 aaKnown RBP26.95■■□□□ 1.9
TRIM65-202ENST00000540128 FMR1Q06787 632 aaKnown RBP eCLIP26.94■■□□□ 1.95e-6■■■■□ 21.6
TRIM65-202ENST00000540128 DIXDC1Q155Q3 683 aa26.94■■□□□ 1.9
TRIM65-202ENST00000540128 ANKRD45Q5TZF3 282 aa26.94■■□□□ 1.9
TRIM65-202ENST00000540128 SLF2Q8IX21 1173 aa26.94■■□□□ 1.9
TRIM65-202ENST00000540128 ZNF384Q8TF68 577 aa26.94■■□□□ 1.9
TRIM65-202ENST00000540128 ZNF70Q9UC06 446 aaPredicted RBP26.94■■□□□ 1.9
TRIM65-202ENST00000540128 DAGLAQ9Y4D2 1042 aa26.94■■□□□ 1.9
TRIM65-202ENST00000540128 GAKO14976 1311 aa26.93■■□□□ 1.9
TRIM65-202ENST00000540128 ADM5C9JUS6 153 aa26.93■■□□□ 1.9
TRIM65-202ENST00000540128 CENPBP07199 599 aaPredicted RBP26.93■■□□□ 1.9
TRIM65-202ENST00000540128 MECOMQ03112 1051 aa26.93■■□□□ 1.9
TRIM65-202ENST00000540128 DZIP1Q86YF9 867 aaKnown RBP26.93■■□□□ 1.9
TRIM65-202ENST00000540128 NSUN4Q96CB9 384 aaKnown RBP26.93■■□□□ 1.9
TRIM65-202ENST00000540128 BCL11AQ9H165 835 aa26.93■■□□□ 1.9
TRIM65-202ENST00000540128 TDRD3Q9H7E2 651 aaKnown RBP26.93■■□□□ 1.9
TRIM65-202ENST00000540128 PIH1D3Q9NQM4 214 aaKnown RBP26.93■■□□□ 1.9
TRIM65-202ENST00000540128 ECHDC1Q9NTX5 307 aa26.93■■□□□ 1.9
TRIM65-202ENST00000540128 LRP2BPQ9P2M1 347 aa26.93■■□□□ 1.9
TRIM65-202ENST00000540128 CST9Q5W186 159 aa26.92■■□□□ 1.9
TRIM65-202ENST00000540128 CLRN2A0PK11 232 aa26.91■■□□□ 1.9
TRIM65-202ENST00000540128 TMEM88BA6NKF7 163 aa26.91■■□□□ 1.9
TRIM65-202ENST00000540128 LDHCP07864 332 aa26.91■■□□□ 1.9
TRIM65-202ENST00000540128 GSTO1P78417 241 aa26.91■■□□□ 1.9
TRIM65-202ENST00000540128 DLK2Q6UY11 383 aa26.91■■□□□ 1.9
TRIM65-202ENST00000540128 CREBZFQ9NS37 354 aa26.91■■□□□ 1.9
TRIM65-202ENST00000540128 RAI14Q9P0K7 980 aa26.91■■□□□ 1.9
TRIM65-202ENST00000540128 FKBP1CQ5VVH2 108 aa26.9■■□□□ 1.9
TRIM65-202ENST00000540128 TMED8Q6PL24 325 aaPredicted RBP26.9■■□□□ 1.9
TRIM65-202ENST00000540128 HAUS7Q99871 368 aa26.9■■□□□ 1.9
TRIM65-202ENST00000540128 PPP2R3BQ9Y5P8 575 aa26.9■■□□□ 1.9
TRIM65-202ENST00000540128 NDUFB9Q9Y6M9 179 aa26.9■■□□□ 1.9
TRIM65-202ENST00000540128 GPR75-ASB3A0A0A6YYF3 556 aa26.89■■□□□ 1.9
TRIM65-202ENST00000540128 TTF1Q15361 905 aaPredicted RBP26.89■■□□□ 1.9
TRIM65-202ENST00000540128 CDCA5Q96FF9 252 aa26.89■■□□□ 1.9
TRIM65-202ENST00000540128 GPATCH3Q96I76 525 aa26.89■■□□□ 1.9
TRIM65-202ENST00000540128 DEFB129Q9H1M3 183 aa26.89■■□□□ 1.9
TRIM65-202ENST00000540128 BOLA2Q9H3K6 86 aa26.89■■□□□ 1.9
TRIM65-202ENST00000540128 ANTXR1Q9H6X2 564 aa26.89■■□□□ 1.9
TRIM65-202ENST00000540128 ZBTB47Q9UFB7 747 aaPredicted RBP26.89■■□□□ 1.9
TRIM65-202ENST00000540128 ECM29Q5VYK3 1845 aa26.88■■□□□ 1.89
TRIM65-202ENST00000540128 CDC42EP5Q6NZY7 148 aa26.88■■□□□ 1.89
TRIM65-202ENST00000540128 SCAF8Q9UPN6 1271 aaKnown RBP26.88■■□□□ 1.89
TRIM65-202ENST00000540128 MROH7-TTC4A0A0A0MT08 1334 aa26.88■■□□□ 1.89
TRIM65-202ENST00000540128 TTC41PQ6P2S7 1318 aa26.88■■□□□ 1.89
TRIM65-202ENST00000540128 SALL3Q9BXA9 1300 aa26.88■■□□□ 1.89
TRIM65-202ENST00000540128 CELF2O95319 508 aaKnown RBP26.87■■□□□ 1.89
TRIM65-202ENST00000540128 NUCB1Q02818 461 aa26.87■■□□□ 1.89
TRIM65-202ENST00000540128 TNFAIP1Q13829 316 aa26.87■■□□□ 1.89
TRIM65-202ENST00000540128 VEZTQ9HBM0 779 aa26.87■■□□□ 1.89
TRIM65-202ENST00000540128 OTUD7AQ8TE49 926 aaPredicted RBP26.86■■□□□ 1.89
TRIM65-202ENST00000540128 TRPM7Q96QT4 1865 aa26.86■■□□□ 1.89
TRIM65-202ENST00000540128 MYH2Q9UKX2 1941 aa26.86■■□□□ 1.89
TRIM65-202ENST00000540128 MAP4K4O95819 1239 aaPredicted RBP26.85■■□□□ 1.89
TRIM65-202ENST00000540128 NAA16Q6N069 864 aaPredicted RBP26.85■■□□□ 1.89
TRIM65-202ENST00000540128 DNAJC2Q99543 621 aaKnown RBP26.85■■□□□ 1.89
TRIM65-202ENST00000540128 USP40Q9NVE5 1235 aa26.85■■□□□ 1.89
TRIM65-202ENST00000540128 TMOD2Q9NZR1 351 aa26.85■■□□□ 1.89
TRIM65-202ENST00000540128 STAP2Q9UGK3 403 aa26.85■■□□□ 1.89
TRIM65-202ENST00000540128 GOLIM4O00461 696 aa26.84■■□□□ 1.89
TRIM65-202ENST00000540128 IDH1O75874 414 aaKnown RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms