RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 GSE1Q14687 1217 aa26.58■■□□□ 1.85
HOMER3-204ENST00000539827 IFNL3Q8IZI9 196 aa26.58■■□□□ 1.85
HOMER3-204ENST00000539827 PNPLA7Q6ZV29 1317 aa26.58■■□□□ 1.84
HOMER3-204ENST00000539827 ALX1Q15699 326 aa26.57■■□□□ 1.84
HOMER3-204ENST00000539827 SLC4A4Q9Y6R1 1079 aa26.57■■□□□ 1.84
HOMER3-204ENST00000539827 MYH13Q9UKX3 1938 aa26.57■■□□□ 1.84
HOMER3-204ENST00000539827 WDR33Q9C0J8 1336 aaKnown RBP26.57■■□□□ 1.84
HOMER3-204ENST00000539827 SYT1P21579 422 aa26.57■■□□□ 1.84
HOMER3-204ENST00000539827 TBC1D10CQ8IV04 446 aa26.57■■□□□ 1.84
HOMER3-204ENST00000539827 JAG2Q9Y219 1238 aa26.57■■□□□ 1.84
HOMER3-204ENST00000539827 GSG1L2A8MUP6 293 aa26.56■■□□□ 1.84
HOMER3-204ENST00000539827 HOXA10P31260 410 aaPredicted RBP26.56■■□□□ 1.84
HOMER3-204ENST00000539827 MSL1Q68DK7 614 aa26.56■■□□□ 1.84
HOMER3-204ENST00000539827 MB21D2Q8IYB1 491 aaPredicted RBP26.56■■□□□ 1.84
HOMER3-204ENST00000539827 NCOA7Q8NI08 942 aa26.56■■□□□ 1.84
HOMER3-204ENST00000539827 NSFL1CQ9UNZ2 370 aaKnown RBP26.56■■□□□ 1.84
HOMER3-204ENST00000539827 KLRG2A4D1S0 409 aaPredicted RBP26.55■■□□□ 1.84
HOMER3-204ENST00000539827 GTF3C6Q969F1 213 aa26.55■■□□□ 1.84
HOMER3-204ENST00000539827 AGXT2Q9BYV1 514 aa26.55■■□□□ 1.84
HOMER3-204ENST00000539827 NAPBQ9H115 298 aa26.55■■□□□ 1.84
HOMER3-204ENST00000539827 STX6O43752 255 aa26.55■■□□□ 1.84
HOMER3-204ENST00000539827 BBOX1O75936 387 aa26.55■■□□□ 1.84
HOMER3-204ENST00000539827 PTMSP20962 102 aa26.55■■□□□ 1.84
HOMER3-204ENST00000539827 NAA16Q6N069 864 aaPredicted RBP26.55■■□□□ 1.84
HOMER3-204ENST00000539827 RALYLQ86SE5 291 aaKnown RBP26.55■■□□□ 1.84
HOMER3-204ENST00000539827 CRAMP1Q96RY5 1269 aa26.55■■□□□ 1.84
HOMER3-204ENST00000539827 GPHNQ9NQX3 736 aaPredicted RBP26.55■■□□□ 1.84
HOMER3-204ENST00000539827 CACNA1SQ13698 1873 aa26.54■■□□□ 1.84
HOMER3-204ENST00000539827 MAGEB6P1A0A0J9YX57 407 aa26.54■■□□□ 1.84
HOMER3-204ENST00000539827 GNAT2P19087 354 aa26.54■■□□□ 1.84
HOMER3-204ENST00000539827 EZH2Q15910 746 aaKnown RBP26.54■■□□□ 1.84
HOMER3-204ENST00000539827 ZNF384Q8TF68 577 aa26.54■■□□□ 1.84
HOMER3-204ENST00000539827 PDS5AQ29RF7 1337 aaKnown RBP26.54■■□□□ 1.84
HOMER3-204ENST00000539827 PRC1O43663 620 aa26.53■■□□□ 1.84
HOMER3-204ENST00000539827 MMP10P09238 476 aa26.53■■□□□ 1.84
HOMER3-204ENST00000539827 ANKRD31Q8N7Z5 1873 aa26.53■■□□□ 1.84
HOMER3-204ENST00000539827 UFL1O94874 794 aa26.53■■□□□ 1.84
HOMER3-204ENST00000539827 MCM5P33992 734 aa26.53■■□□□ 1.84
HOMER3-204ENST00000539827 ANTXR2P58335 489 aa26.53■■□□□ 1.84
HOMER3-204ENST00000539827 DYNLL1P63167 89 aaKnown RBP26.53■■□□□ 1.84
HOMER3-204ENST00000539827 EN1Q05925 392 aaPredicted RBP26.53■■□□□ 1.84
HOMER3-204ENST00000539827 FOXD4L6Q3SYB3 417 aaPredicted RBP26.53■■□□□ 1.84
HOMER3-204ENST00000539827 FOXD4L3Q6VB84 417 aaPredicted RBP26.53■■□□□ 1.84
HOMER3-204ENST00000539827 NAP1L2Q9ULW6 460 aaPredicted RBP26.53■■□□□ 1.84
HOMER3-204ENST00000539827 PARP3Q9Y6F1 533 aa26.53■■□□□ 1.84
HOMER3-204ENST00000539827 ZSCAN22P10073 491 aaPredicted RBP26.52■■□□□ 1.84
HOMER3-204ENST00000539827 SCRN1Q12765 414 aa26.52■■□□□ 1.84
HOMER3-204ENST00000539827 BRIP1Q9BX63 1249 aa26.52■■□□□ 1.84
HOMER3-204ENST00000539827 GZF1Q9H116 711 aaPredicted RBP26.52■■□□□ 1.84
HOMER3-204ENST00000539827 ZMYM6O95789 1325 aa26.52■■□□□ 1.84
HOMER3-204ENST00000539827 PFKFB2O60825 505 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 ATP2B4P23634 1241 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 TDO2P48775 406 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 CTDSPL2Q05D32 466 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 NKX2-3Q8TAU0 364 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 NSUN4Q96CB9 384 aaKnown RBP26.51■■□□□ 1.83
HOMER3-204ENST00000539827 GGA1Q9UJY5 639 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 MECOMQ03112 1051 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 TRDNQ13061 729 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 NACAP1Q9BZK3 213 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 INCENPQ9NQS7 918 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 NRXN2Q9P2S2 1712 aa26.51■■□□□ 1.83
HOMER3-204ENST00000539827 PRDX5P30044 214 aa26.5■■□□□ 1.83
HOMER3-204ENST00000539827 ZNF804AQ7Z570 1209 aa26.5■■□□□ 1.83
HOMER3-204ENST00000539827 RIOK1Q9BRS2 568 aaKnown RBP26.5■■□□□ 1.83
HOMER3-204ENST00000539827 ANO8Q9HCE9 1232 aaPredicted RBP26.5■■□□□ 1.83
HOMER3-204ENST00000539827 LMBRD1Q9NUN5 540 aa26.5■■□□□ 1.83
HOMER3-204ENST00000539827 RGPD3A6NKT7 1758 aaPredicted RBP26.5■■□□□ 1.83
HOMER3-204ENST00000539827 RGPD4Q7Z3J3 1758 aa26.5■■□□□ 1.83
HOMER3-204ENST00000539827 JAK2O60674 1132 aa26.49■■□□□ 1.83
HOMER3-204ENST00000539827 CCT2P78371 535 aaKnown RBP26.49■■□□□ 1.83
HOMER3-204ENST00000539827 C15orf52Q6ZUT6 534 aaKnown RBP26.49■■□□□ 1.83
HOMER3-204ENST00000539827 TDRD7Q8NHU6 1098 aaKnown RBP26.49■■□□□ 1.83
HOMER3-204ENST00000539827 SDR42E1Q8WUS8 393 aa26.49■■□□□ 1.83
HOMER3-204ENST00000539827 MTMR6Q9Y217 621 aa26.49■■□□□ 1.83
HOMER3-204ENST00000539827 PPEF1O14829 653 aaPredicted RBP26.49■■□□□ 1.83
HOMER3-204ENST00000539827 LARP1BQ659C4 914 aaKnown RBP26.49■■□□□ 1.83
HOMER3-204ENST00000539827 CYB5R4Q7L1T6 521 aa26.49■■□□□ 1.83
HOMER3-204ENST00000539827 CAMKK2Q96RR4 588 aa26.49■■□□□ 1.83
HOMER3-204ENST00000539827 TACC3Q9Y6A5 838 aa26.49■■□□□ 1.83
HOMER3-204ENST00000539827 NEDD4P46934 1319 aa26.48■■□□□ 1.83
HOMER3-204ENST00000539827 PRPF40AO75400 957 aaKnown RBP26.48■■□□□ 1.83
HOMER3-204ENST00000539827 SKOR2Q2VWA4 1001 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-204ENST00000539827 VPS37CA5D8V6 355 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-204ENST00000539827 B4E1Z4 1266 aa26.47■■□□□ 1.83
HOMER3-204ENST00000539827 PDIA3P30101 505 aaKnown RBP26.47■■□□□ 1.83
HOMER3-204ENST00000539827 FBXL16Q8N461 479 aa26.47■■□□□ 1.83
HOMER3-204ENST00000539827 F13A1P00488 732 aa26.47■■□□□ 1.83
HOMER3-204ENST00000539827 ZNF274Q96GC6 653 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-204ENST00000539827 POLLQ9UGP5 575 aa26.47■■□□□ 1.83
HOMER3-204ENST00000539827 ZBTB22O15209 634 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 SRGNP10124 158 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 STK11IPQ8N1F8 1099 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 TBC1D16Q8TBP0 767 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 NCOA5Q9HCD5 579 aaKnown RBP26.46■■□□□ 1.83
HOMER3-204ENST00000539827 PODXL2Q9NZ53 605 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 SLC15A2Q16348 729 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 SP8Q8IXZ3 490 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 DDX11Q96FC9 970 aa26.46■■□□□ 1.83
HOMER3-204ENST00000539827 BRPF3Q9ULD4 1205 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms