RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 KRT23Q9C075 422 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 NAPBQ9H115 298 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 GZF1Q9H116 711 aaPredicted RBP11.98□□□□□ -0.49
SPARC-209ENST00000539687 MINPP1Q9UNW1 487 aa11.98□□□□□ -0.49
SPARC-209ENST00000539687 A0A1B0GUL6 1792 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 DUOX1Q9NRD9 1551 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 VPS37CA5D8V6 355 aaPredicted RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 H3BQV1 296 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 CDKL5O76039 1030 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 BAG6P46379 1132 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 UBE2HP62256 183 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 KRT85P78386 507 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 GRAPQ13588 217 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 SPTY2D1Q68D10 685 aaPredicted RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 ATL3Q6DD88 541 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 NAA16Q6N069 864 aaPredicted RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 CPLX2Q6PUV4 134 aaKnown RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 PI16Q6UXB8 463 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 TMC4Q7Z404 712 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 NECAB1Q8N987 351 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 SMARCC2Q8TAQ2 1214 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 GRAPLQ8TC17 118 aaPredicted RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 SRP68Q9UHB9 627 aaKnown RBP11.97□□□□□ -0.49
SPARC-209ENST00000539687 LEMD3Q9Y2U8 911 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 LAMA4Q16363 1823 aa11.97□□□□□ -0.49
SPARC-209ENST00000539687 ELP1O95163 1332 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 PRC1O43663 620 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 CHGBP05060 677 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 BCAMP50895 628 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 ST3GAL1Q11201 340 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 SART3Q15020 963 aaKnown RBP11.96□□□□□ -0.49
SPARC-209ENST00000539687 GIMAP6Q6P9H5 292 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 CERS3Q8IU89 383 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 FLAD1Q8NFF5 587 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 AKT1S1Q96B36 256 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 WWC3Q9ULE0 1092 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 TAF6LQ9Y6J9 622 aa11.96□□□□□ -0.49
SPARC-209ENST00000539687 TIAM2Q8IVF5 1701 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
SPARC-209ENST00000539687 MBD4O95243 580 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 HIBADHP31937 336 aaKnown RBP11.95□□□□□ -0.5
SPARC-209ENST00000539687 SCRN1Q12765 414 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 PTF1AQ7RTS3 328 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 FBXO33Q7Z6M2 555 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 RPGRQ92834 1020 aaKnown RBP11.95□□□□□ -0.5
SPARC-209ENST00000539687 CELF1Q92879 486 aaKnown RBP11.95□□□□□ -0.5
SPARC-209ENST00000539687 TCEANC2Q96MN5 208 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
SPARC-209ENST00000539687 GRPEL1Q9HAV7 217 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 CFAP45Q9UL16 551 aa11.95□□□□□ -0.5
SPARC-209ENST00000539687 ANGEL1Q9UNK9 670 aaKnown RBP11.95□□□□□ -0.5
SPARC-209ENST00000539687 MAGEB6P1A0A0J9YX57 407 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 FOXP2O15409 715 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 CYP7A1P22680 504 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 YY1P25490 414 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 PDIA3P30101 505 aaKnown RBP11.94□□□□□ -0.5
SPARC-209ENST00000539687 TDO2P48775 406 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 RCAN1P53805 252 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 KCNQ4P56696 695 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 STK3Q13188 491 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 NFIXQ14938 502 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 ZSCAN23Q3MJ62 389 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 FOXD4L5Q5VV16 416 aaPredicted RBP11.94□□□□□ -0.5
SPARC-209ENST00000539687 TTLL5Q6EMB2 1281 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 CAVIN1Q6NZI2 390 aaKnown RBP11.94□□□□□ -0.5
SPARC-209ENST00000539687 C15orf52Q6ZUT6 534 aaKnown RBP11.94□□□□□ -0.5
SPARC-209ENST00000539687 IFNL3Q8IZI9 196 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 TMTC2Q8N394 836 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 FOXD4L4Q8WXT5 416 aaPredicted RBP11.94□□□□□ -0.5
SPARC-209ENST00000539687 RBM17Q96I25 401 aaKnown RBP11.94□□□□□ -0.5
SPARC-209ENST00000539687 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 CASZ1Q86V15 1759 aa11.94□□□□□ -0.5
SPARC-209ENST00000539687 XDHP47989 1333 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 SALL1Q9NSC2 1324 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 MAST2Q6P0Q8 1798 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 ERICH2A1L162 156 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 CPLX1O14810 134 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 LIFRP42702 1097 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 HAND2P61296 217 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 SYNE3Q6ZMZ3 975 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 MFSD6Q6ZSS7 791 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 USP48Q86UV5 1035 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 NSUN7Q8NE18 718 aaKnown RBP11.93□□□□□ -0.5
SPARC-209ENST00000539687 WDR66Q8TBY9 1149 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 GPT2Q8TD30 523 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 FAM84BQ96KN1 310 aaPredicted RBP11.93□□□□□ -0.5
SPARC-209ENST00000539687 BRIP1Q9BX63 1249 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 SLC4A4Q9Y6R1 1079 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 UBR3Q6ZT12 1888 aa11.93□□□□□ -0.5
SPARC-209ENST00000539687 KLF18A0A0U1RQI7 1052 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 PTPDC1A2A3K4 754 aa11.92□□□□□ -0.5
SPARC-209ENST00000539687 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms