RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SALL1Q9NSC2 1324 aa19.34■□□□□ 0.69
RPAIN-206ENST00000539417 SPDYE2BA6NHP3 402 aa19.34■□□□□ 0.69
RPAIN-206ENST00000539417 SPDYE6P0CI01 402 aa19.34■□□□□ 0.69
RPAIN-206ENST00000539417 DIXDC1Q155Q3 683 aa19.34■□□□□ 0.69
RPAIN-206ENST00000539417 CLASRPQ8N2M8 674 aaKnown RBP19.34■□□□□ 0.69
RPAIN-206ENST00000539417 MTMR14Q8NCE2 650 aa19.34■□□□□ 0.69
RPAIN-206ENST00000539417 ZNF384Q8TF68 577 aa19.34■□□□□ 0.69
RPAIN-206ENST00000539417 LRRCC1Q9C099 1032 aa19.34■□□□□ 0.69
RPAIN-206ENST00000539417 PDS5AQ29RF7 1337 aaKnown RBP19.33■□□□□ 0.69
RPAIN-206ENST00000539417 CLRN2A0PK11 232 aa19.33■□□□□ 0.68
RPAIN-206ENST00000539417 IGHDP01880 384 aa19.33■□□□□ 0.68
RPAIN-206ENST00000539417 UQCRFS1P1P0C7P4 283 aa19.33■□□□□ 0.68
RPAIN-206ENST00000539417 RBM5P52756 815 aaKnown RBP eCLIP19.33■□□□□ 0.68
RPAIN-206ENST00000539417 CCDC158Q5M9N0 1113 aa19.33■□□□□ 0.68
RPAIN-206ENST00000539417 KRT26Q7Z3Y9 468 aa19.33■□□□□ 0.68
RPAIN-206ENST00000539417 ABCF2Q9UG63 623 aa19.33■□□□□ 0.68
RPAIN-206ENST00000539417 SERPINA10Q9UK55 444 aa19.33■□□□□ 0.68
RPAIN-206ENST00000539417 MYO5AQ9Y4I1 1855 aaKnown RBP19.32■□□□□ 0.68
RPAIN-206ENST00000539417 ZAP70P43403 619 aa19.32■□□□□ 0.68
RPAIN-206ENST00000539417 APLP1P51693 650 aa19.32■□□□□ 0.68
RPAIN-206ENST00000539417 PRAMEF18Q5VWM3 479 aa19.32■□□□□ 0.68
RPAIN-206ENST00000539417 CST9Q5W186 159 aa19.32■□□□□ 0.68
RPAIN-206ENST00000539417 CDC37L1Q7L3B6 337 aa19.32■□□□□ 0.68
RPAIN-206ENST00000539417 DCPSQ96C86 337 aaKnown RBP19.32■□□□□ 0.68
RPAIN-206ENST00000539417 ECM29Q5VYK3 1845 aa19.31■□□□□ 0.68
RPAIN-206ENST00000539417 CYP2E1P05181 493 aaPredicted RBP19.31■□□□□ 0.68
RPAIN-206ENST00000539417 LDHBP07195 334 aaKnown RBP19.31■□□□□ 0.68
RPAIN-206ENST00000539417 MMP14P50281 582 aa19.31■□□□□ 0.68
RPAIN-206ENST00000539417 HDAC1Q13547 482 aaPredicted RBP19.31■□□□□ 0.68
RPAIN-206ENST00000539417 ZNF512BQ96KM6 892 aaPredicted RBP19.31■□□□□ 0.68
RPAIN-206ENST00000539417 TDRD3Q9H7E2 651 aaKnown RBP19.31■□□□□ 0.68
RPAIN-206ENST00000539417 IFIT2P09913 472 aaKnown RBP19.3■□□□□ 0.68
RPAIN-206ENST00000539417 APOBEC3HQ6NTF7 200 aaKnown RBP19.3■□□□□ 0.68
RPAIN-206ENST00000539417 ANTXR1Q9H6X2 564 aa19.3■□□□□ 0.68
RPAIN-206ENST00000539417 PIH1D3Q9NQM4 214 aaKnown RBP19.3■□□□□ 0.68
RPAIN-206ENST00000539417 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
RPAIN-206ENST00000539417 OTUD7AQ8TE49 926 aaPredicted RBP19.29■□□□□ 0.68
RPAIN-206ENST00000539417 TEKT1Q969V4 418 aa19.29■□□□□ 0.68
RPAIN-206ENST00000539417 ZNF408Q9H9D4 720 aa19.29■□□□□ 0.68
RPAIN-206ENST00000539417 DAGLAQ9Y4D2 1042 aa19.29■□□□□ 0.68
RPAIN-206ENST00000539417 PITPNM2Q9BZ72 1349 aa19.29■□□□□ 0.68
RPAIN-206ENST00000539417 TRPM7Q96QT4 1865 aa19.29■□□□□ 0.68
RPAIN-206ENST00000539417 CACNB3P54284 484 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 HDLBPQ00341 1268 aaKnown RBP19.28■□□□□ 0.68
RPAIN-206ENST00000539417 AAMPQ13685 434 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 ZDHHC15Q96MV8 337 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 ZNF70Q9UC06 446 aaPredicted RBP19.28■□□□□ 0.68
RPAIN-206ENST00000539417 MYH2Q9UKX2 1941 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 MECOMQ03112 1051 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 SPDYE2Q495Y8 402 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 TSHZ3Q63HK5 1081 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 SULF1Q8IWU6 871 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 EDC3Q96F86 508 aaKnown RBP19.28■□□□□ 0.68
RPAIN-206ENST00000539417 CDCA5Q96FF9 252 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 MRIQ9BWK5 157 aa19.28■□□□□ 0.68
RPAIN-206ENST00000539417 CELF2O95319 508 aaKnown RBP19.27■□□□□ 0.67
RPAIN-206ENST00000539417 HHIPL2Q6UWX4 724 aa19.27■□□□□ 0.67
RPAIN-206ENST00000539417 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.67
RPAIN-206ENST00000539417 VEZTQ9HBM0 779 aa19.27■□□□□ 0.67
RPAIN-206ENST00000539417 MAST3O60307 1309 aa19.26■□□□□ 0.67
RPAIN-206ENST00000539417 TMEM88BA6NKF7 163 aa19.26■□□□□ 0.67
RPAIN-206ENST00000539417 DZIP1Q86YF9 867 aaKnown RBP19.26■□□□□ 0.67
RPAIN-206ENST00000539417 CDAN1Q8IWY9 1227 aa19.26■□□□□ 0.67
RPAIN-206ENST00000539417 ZGPATQ8N5A5 531 aaKnown RBP19.26■□□□□ 0.67
RPAIN-206ENST00000539417 NSUN4Q96CB9 384 aaKnown RBP19.26■□□□□ 0.67
RPAIN-206ENST00000539417 ANKRD45Q5TZF3 282 aa19.25■□□□□ 0.67
RPAIN-206ENST00000539417 BOLA2Q9H3K6 86 aa19.25■□□□□ 0.67
RPAIN-206ENST00000539417 RAI14Q9P0K7 980 aa19.25■□□□□ 0.67
RPAIN-206ENST00000539417 GAKO14976 1311 aa19.25■□□□□ 0.67
RPAIN-206ENST00000539417 TCP10L2B9ZVM9 353 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 SPTY2D1Q68D10 685 aaPredicted RBP19.24■□□□□ 0.67
RPAIN-206ENST00000539417 CDC42EP5Q6NZY7 148 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 ADGRA1Q86SQ6 560 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 APOBEC3FQ8IUX4 373 aaKnown RBP19.24■□□□□ 0.67
RPAIN-206ENST00000539417 DNAJC5GQ8N7S2 189 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 DEFB129Q9H1M3 183 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 CREBZFQ9NS37 354 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 LRP2BPQ9P2M1 347 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 FZD1Q9UP38 647 aa19.24■□□□□ 0.67
RPAIN-206ENST00000539417 MYO1BO43795 1136 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 ATP5JP18859 108 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 MOB2Q70IA6 237 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 SMC5Q8IY18 1101 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 GCC1Q96CN9 775 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 DNAJC2Q99543 621 aaKnown RBP19.23■□□□□ 0.67
RPAIN-206ENST00000539417 RWDD1Q9H446 243 aaPredicted RBP19.23■□□□□ 0.67
RPAIN-206ENST00000539417 CNTNAP1P78357 1384 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 DOCK2Q92608 1830 aa19.23■□□□□ 0.67
RPAIN-206ENST00000539417 RASA3Q14644 834 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 FAM163AQ96GL9 167 aaPredicted RBP19.22■□□□□ 0.67
RPAIN-206ENST00000539417 MAST2Q6P0Q8 1798 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 MROH7-TTC4A0A0A0MT08 1334 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 SALL3Q9BXA9 1300 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 SSC5DA1L4H1 1573 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 BTDP43251 543 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 NFIAQ12857 509 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.22■□□□□ 0.67
RPAIN-206ENST00000539417 USP40Q9NVE5 1235 aa19.22■□□□□ 0.67
RPAIN-206ENST00000539417 GOLIM4O00461 696 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms