RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 DIEXFQ68CQ4 756 aaKnown RBP27.68■■■□□ 2.02
SCARB1-206ENST00000539320 TDRD3Q9H7E2 651 aaKnown RBP27.68■■■□□ 2.02
SCARB1-206ENST00000539320 MYH13Q9UKX3 1938 aa27.68■■■□□ 2.02
SCARB1-206ENST00000539320 IPO8O15397 1037 aaKnown RBP27.67■■■□□ 2.02
SCARB1-206ENST00000539320 HDLBPQ00341 1268 aaKnown RBP27.67■■■□□ 2.02
SCARB1-206ENST00000539320 MKRN3Q13064 507 aaKnown RBP27.67■■■□□ 2.02
SCARB1-206ENST00000539320 NBPF12Q5TAG4 269 aaPredicted RBP27.67■■■□□ 2.02
SCARB1-206ENST00000539320 GNAI3P08754 354 aa27.66■■■□□ 2.02
SCARB1-206ENST00000539320 HNRNPUQ00839 825 aaKnown RBP eCLIP27.66■■■□□ 2.023e-6■■□□□ 14.2
SCARB1-206ENST00000539320 ATP2B3Q16720 1220 aa27.66■■■□□ 2.02
SCARB1-206ENST00000539320 MCOLN1Q9GZU1 580 aa27.66■■■□□ 2.02
SCARB1-206ENST00000539320 CEP126Q9P2H0 1117 aa27.66■■■□□ 2.02
SCARB1-206ENST00000539320 PA2G4Q9UQ80 394 aaKnown RBP27.66■■■□□ 2.02
SCARB1-206ENST00000539320 SUGT1Q9Y2Z0 365 aa27.66■■■□□ 2.02
SCARB1-206ENST00000539320 MAST3O60307 1309 aa27.66■■■□□ 2.02
SCARB1-206ENST00000539320 TRIM27P14373 513 aa27.65■■■□□ 2.02
SCARB1-206ENST00000539320 IL15P40933 162 aaPredicted RBP27.65■■■□□ 2.02
SCARB1-206ENST00000539320 TEKT1Q969V4 418 aa27.65■■■□□ 2.02
SCARB1-206ENST00000539320 COPRSQ9NQ92 184 aa27.65■■■□□ 2.02
SCARB1-206ENST00000539320 SREBF2Q12772 1141 aa27.64■■■□□ 2.02
SCARB1-206ENST00000539320 DGKZQ13574 1117 aa27.64■■■□□ 2.02
SCARB1-206ENST00000539320 SPRYD7Q5W111 196 aa27.64■■■□□ 2.02
SCARB1-206ENST00000539320 ATF7IPQ6VMQ6 1270 aa27.64■■■□□ 2.02
SCARB1-206ENST00000539320 BCAR3O75815 825 aa27.63■■■□□ 2.01
SCARB1-206ENST00000539320 IREB2P48200 963 aaKnown RBP27.63■■■□□ 2.01
SCARB1-206ENST00000539320 FRAT1Q92837 279 aaPredicted RBP27.63■■■□□ 2.01
SCARB1-206ENST00000539320 TCP10L2B9ZVM9 353 aa27.62■■■□□ 2.01
SCARB1-206ENST00000539320 TM4SF4P48230 202 aa27.62■■■□□ 2.01
SCARB1-206ENST00000539320 WDR66Q8TBY9 1149 aa27.62■■■□□ 2.01
SCARB1-206ENST00000539320 CLMNQ96JQ2 1002 aa27.62■■■□□ 2.01
SCARB1-206ENST00000539320 TNNQ9UQP3 1299 aa27.62■■■□□ 2.01
SCARB1-206ENST00000539320 UNCXA6NJT0 531 aa27.61■■■□□ 2.01
SCARB1-206ENST00000539320 TNNI2P48788 182 aa27.61■■■□□ 2.01
SCARB1-206ENST00000539320 SLC10A4Q96EP9 437 aa27.61■■■□□ 2.01
SCARB1-206ENST00000539320 ZDHHC15Q96MV8 337 aa27.61■■■□□ 2.01
SCARB1-206ENST00000539320 MTX1Q13505 466 aa27.6■■■□□ 2.01
SCARB1-206ENST00000539320 WNK4Q96J92 1243 aa27.6■■■□□ 2.01
SCARB1-206ENST00000539320 MRIQ9BWK5 157 aa27.6■■■□□ 2.01
SCARB1-206ENST00000539320 GNL3LQ9NVN8 582 aaKnown RBP27.6■■■□□ 2.01
SCARB1-206ENST00000539320 OTOFQ9HC10 1997 aa27.6■■■□□ 2.01
SCARB1-206ENST00000539320 SRGAP3O43295 1099 aa27.59■■■□□ 2.01
SCARB1-206ENST00000539320 ZBTB48P10074 688 aaPredicted RBP27.59■■■□□ 2.01
SCARB1-206ENST00000539320 CDAN1Q8IWY9 1227 aa27.59■■■□□ 2.01
SCARB1-206ENST00000539320 TEPSINQ96N21 525 aa27.59■■■□□ 2.01
SCARB1-206ENST00000539320 TMEM39BQ9GZU3 492 aa27.59■■■□□ 2.01
SCARB1-206ENST00000539320 TMOD2Q9NZR1 351 aa27.59■■■□□ 2.01
SCARB1-206ENST00000539320 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.59■■■□□ 2.01
SCARB1-206ENST00000539320 USP2O75604 605 aaPredicted RBP27.58■■■□□ 2.01
SCARB1-206ENST00000539320 CLUAP1Q96AJ1 413 aa27.58■■■□□ 2.01
SCARB1-206ENST00000539320 MANSC4A6NHS7 340 aaPredicted RBP27.57■■■□□ 2
SCARB1-206ENST00000539320 CCDC85CA6NKD9 419 aa27.57■■■□□ 2
SCARB1-206ENST00000539320 HHIPL2Q6UWX4 724 aa27.57■■■□□ 2
SCARB1-206ENST00000539320 ANKRD13AQ8IZ07 590 aa27.57■■■□□ 2
SCARB1-206ENST00000539320 LAMB1P07942 1786 aa27.56■■■□□ 2
SCARB1-206ENST00000539320 SEMA3EO15041 775 aa27.56■■■□□ 2
SCARB1-206ENST00000539320 TBC1D8O95759 1140 aa27.56■■■□□ 2
SCARB1-206ENST00000539320 GNAI2P04899 355 aa27.56■■■□□ 2
SCARB1-206ENST00000539320 PHKA1P46020 1223 aa27.56■■■□□ 2
SCARB1-206ENST00000539320 CACNB3P54284 484 aa27.56■■■□□ 2
SCARB1-206ENST00000539320 ZKSCAN2Q63HK3 967 aa27.56■■■□□ 2
SCARB1-206ENST00000539320 APOBEC3HQ6NTF7 200 aaKnown RBP27.56■■■□□ 2
SCARB1-206ENST00000539320 ADORA1P30542 326 aa27.55■■■□□ 2
SCARB1-206ENST00000539320 DENND2AQ9ULE3 1009 aa27.55■■■□□ 2
SCARB1-206ENST00000539320 FKBP1CQ5VVH2 108 aa27.54■■■□□ 2
SCARB1-206ENST00000539320 CTU1Q7Z7A3 348 aaKnown RBP27.54■■■□□ 2
SCARB1-206ENST00000539320 RPAP1Q9BWH6 1393 aaPredicted RBP27.53■■■□□ 2
SCARB1-206ENST00000539320 SALL1Q9NSC2 1324 aa27.53■■■□□ 2
SCARB1-206ENST00000539320 ZBTB22O15209 634 aa27.53■■■□□ 2
SCARB1-206ENST00000539320 PRDX5P30044 214 aa27.53■■■□□ 2
SCARB1-206ENST00000539320 CCDC102BQ68D86 513 aa27.53■■■□□ 2
SCARB1-206ENST00000539320 FAM83AQ86UY5 434 aa27.53■■■□□ 2
SCARB1-206ENST00000539320 TMEM57Q8N5G2 664 aa27.53■■■□□ 2
SCARB1-206ENST00000539320 CFHR5Q9BXR6 569 aa27.53■■■□□ 2
SCARB1-206ENST00000539320 ALDH1A1P00352 501 aa27.52■■■□□ 2
SCARB1-206ENST00000539320 INHBEP58166 350 aa27.52■■■□□ 2
SCARB1-206ENST00000539320 NOM1Q5C9Z4 860 aaKnown RBP27.52■■■□□ 2
SCARB1-206ENST00000539320 ZNF296Q8WUU4 475 aaPredicted RBP27.52■■■□□ 2
SCARB1-206ENST00000539320 DAGLAQ9Y4D2 1042 aa27.52■■■□□ 2
SCARB1-206ENST00000539320 ZBED9Q6R2W3 1325 aa27.51■■□□□ 1.99
SCARB1-206ENST00000539320 LDHBP07195 334 aaKnown RBP27.51■■□□□ 1.99
SCARB1-206ENST00000539320 GJA5P36382 358 aa27.51■■□□□ 1.99
SCARB1-206ENST00000539320 TFCP2Q12800 502 aa27.51■■□□□ 1.99
SCARB1-206ENST00000539320 DIXDC1Q155Q3 683 aa27.51■■□□□ 1.99
SCARB1-206ENST00000539320 ELP3Q9H9T3 547 aa27.51■■□□□ 1.99
SCARB1-206ENST00000539320 AKAP2Q9Y2D5 859 aa27.51■■□□□ 1.99
SCARB1-206ENST00000539320 A0A1B0GUL7 405 aa27.5■■□□□ 1.99
SCARB1-206ENST00000539320 GPR25O00155 361 aa27.5■■□□□ 1.99
SCARB1-206ENST00000539320 IFNL1Q8IU54 200 aa27.5■■□□□ 1.99
SCARB1-206ENST00000539320 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.5■■□□□ 1.99
SCARB1-206ENST00000539320 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.49■■□□□ 1.99
SCARB1-206ENST00000539320 ZGPATQ8N5A5 531 aaKnown RBP27.49■■□□□ 1.99
SCARB1-206ENST00000539320 OPTNQ96CV9 577 aa27.49■■□□□ 1.99
SCARB1-206ENST00000539320 PDS5AQ29RF7 1337 aaKnown RBP27.48■■□□□ 1.99
SCARB1-206ENST00000539320 PNMA6EA0A0J9YXQ4 647 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 IGF2BP3O00425 579 aaKnown RBP eCLIP27.48■■□□□ 1.99
SCARB1-206ENST00000539320 TIMM10P62072 90 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 MAP3K9P80192 1104 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 RASGRF1Q13972 1273 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 VGLL4Q14135 290 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 MVPQ14764 893 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms