RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-210	ENST00000539191	PTCH2	Q9Y6C5	1203 aa		10.46	□□□□□ -0.73
NPIPB4-210	ENST00000539191	LAMA3	Q16787	3333 aa		10.46	□□□□□ -0.74
NPIPB4-210	ENST00000539191	CCL15-CCL14	A0A0B4J2E2	113 aa		10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	MYO1B	O43795	1136 aa		10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SLURP2	P0DP57	97 aa		10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ZBTB48	P10074	688 aa	Predicted RBP	10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	CRK	P46108	304 aa		10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	IREB2	P48200	963 aa	Known RBP	10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	CCL15	Q16663	113 aa		10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	C15orf52	Q6ZUT6	534 aa	Known RBP	10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	TDRD7	Q8NHU6	1098 aa	Known RBP	10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SH3TC2	Q8TF17	1288 aa		10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	MS4A4A	Q96JQ5	239 aa		10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	BICC1	Q9H694	974 aa	Known RBP	10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.45	□□□□□ -0.74
NPIPB4-210	ENST00000539191	IL16	Q14005	1332 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	HIBADH	P31937	336 aa	Known RBP	10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	BCAM	P50895	628 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SUPT20HL1	Q3ZLR7	823 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	MIGA2	Q7L4E1	593 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ANKRD13A	Q8IZ07	590 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	FAM9B	Q8IZU0	186 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	CFHR5	Q9BXR6	569 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	EFCC1	Q9HA90	598 aa		10.44	□□□□□ -0.74
NPIPB4-210	ENST00000539191	MGAM	O43451	1857 aa		10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	FAM205A	Q6ZU69	1335 aa		10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	CTGF	P29279	349 aa		10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SP3	Q02447	781 aa		10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	TAF1C	Q15572	869 aa	Predicted RBP	10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	NOM1	Q5C9Z4	860 aa	Known RBP	10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ANKRD44	Q8N8A2	993 aa		10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	PCDH10	Q9P2E7	1040 aa		10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	RIPOR2	Q9Y4F9	1068 aa		10.43	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ALDH1A1	P00352	501 aa		10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	DIXDC1	Q155Q3	683 aa		10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	HABP4	Q5JVS0	413 aa	Known RBP	10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ERO1A	Q96HE7	468 aa		10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	WRNIP1	Q96S55	665 aa		10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SRCIN1	Q9C0H9	1055 aa		10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	PPP2R3B	Q9Y5P8	575 aa		10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SNCAIP	Q9Y6H5	919 aa		10.42	□□□□□ -0.74
NPIPB4-210	ENST00000539191	DOCK3	Q8IZD9	2030 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	MYH2	Q9UKX2	1941 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	IRF6	O14896	467 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	FRAT2	O75474	233 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	INPP5B	P32019	993 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	TCP10	Q12799	353 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	METTL24	Q5JXM2	366 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	VPS37D	Q86XT2	251 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	VGLL2	Q8N8G2	317 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ZNF333	Q96JL9	665 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	CHMP4A	Q9BY43	222 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	CPA4	Q9UI42	421 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SERPINA10	Q9UK55	444 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	DOCK2	Q92608	1830 aa		10.41	□□□□□ -0.74
NPIPB4-210	ENST00000539191	TESPA1	A2RU30	521 aa	Predicted RBP	10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	BTBD19	C9JJ37	291 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	INHBE	P58166	350 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	MAP3K9	P80192	1104 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	NFIA	Q12857	509 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	MTFR1	Q15390	333 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	SLC9C1	Q4G0N8	1177 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	FBXO33	Q7Z6M2	555 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	WDR63	Q8IWG1	891 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ZFPM1	Q8IX07	1006 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	ARMC5	Q96C12	935 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	COLQ	Q9Y215	455 aa	Predicted RBP	10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	PTPRF	P10586	1907 aa		10.4	□□□□□ -0.74
NPIPB4-210	ENST00000539191	FKBP1A	P62942	108 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-210	ENST00000539191	UBE4A	Q14139	1066 aa		10.39	□□□□□ -0.75
NPIPB4-210	ENST00000539191	SLC4A8	Q2Y0W8	1093 aa		10.39	□□□□□ -0.75
NPIPB4-210	ENST00000539191	CCDC84	Q86UT8	332 aa	Predicted RBP	10.39	□□□□□ -0.75
NPIPB4-210	ENST00000539191	MRPL50	Q8N5N7	158 aa	Known RBP	10.39	□□□□□ -0.75
NPIPB4-210	ENST00000539191	SIL1	Q9H173	461 aa		10.39	□□□□□ -0.75
NPIPB4-210	ENST00000539191	CSAD	Q9Y600	493 aa		10.39	□□□□□ -0.75
NPIPB4-210	ENST00000539191	PHIP	Q8WWQ0	1821 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	SPDYE5	A6NIY4	337 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191		H0YGN5	161 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	ALDH1L1	O75891	902 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	FXR1	P51114	621 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	TNFAIP1	Q13829	316 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	OTUD7B	Q6GQQ9	843 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	TEKT1	Q969V4	418 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	ZFYVE28	Q9HCC9	887 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	ALPK3	Q96L96	1907 aa		10.38	□□□□□ -0.75
NPIPB4-210	ENST00000539191	MROH5	Q6ZUA9	1318 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	COL6A3	P12111	3177 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	PDE8B	O95263	885 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	CYP2C8	P10632	490 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	PRDX5	P30044	214 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	ADORA1	P30542	326 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	MMP14	P50281	582 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	GTF2A2	P52657	109 aa		10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	LACTB	P83111	547 aa	Predicted RBP	10.37	□□□□□ -0.75
NPIPB4-210	ENST00000539191	RABL6	Q3YEC7	729 aa	Predicted RBP	10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms