RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PRC1O43663 620 aa17.48■□□□□ 0.39
ATL3-203ENST00000538786 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
ATL3-203ENST00000538786 TRDNQ13061 729 aa17.48■□□□□ 0.39
ATL3-203ENST00000538786 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
ATL3-203ENST00000538786 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
ATL3-203ENST00000538786 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
ATL3-203ENST00000538786 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
ATL3-203ENST00000538786 IFNL3Q8IZI9 196 aa17.48■□□□□ 0.39
ATL3-203ENST00000538786 SMARCC2Q8TAQ2 1214 aa17.48■□□□□ 0.39
ATL3-203ENST00000538786 PDIA3P30101 505 aaKnown RBP17.47■□□□□ 0.39
ATL3-203ENST00000538786 GRAPQ13588 217 aa17.47■□□□□ 0.39
ATL3-203ENST00000538786 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
ATL3-203ENST00000538786 ZBTB22O15209 634 aa17.47■□□□□ 0.39
ATL3-203ENST00000538786 JAK2O60674 1132 aa17.47■□□□□ 0.39
ATL3-203ENST00000538786 ANTXR2P58335 489 aa17.47■□□□□ 0.39
ATL3-203ENST00000538786 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
ATL3-203ENST00000538786 TBC1D10CQ8IV04 446 aa17.47■□□□□ 0.39
ATL3-203ENST00000538786 EPB41L4AQ9HCS5 686 aaPredicted RBP17.47■□□□□ 0.39
ATL3-203ENST00000538786 RAI14Q9P0K7 980 aa17.47■□□□□ 0.39
ATL3-203ENST00000538786 ABCF2Q9UG63 623 aa17.47■□□□□ 0.39
ATL3-203ENST00000538786 GSG1L2A8MUP6 293 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 CYP7A1P22680 504 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 KLRK1P26718 216 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 HIBADHP31937 336 aaKnown RBP17.46■□□□□ 0.39
ATL3-203ENST00000538786 USP48Q86UV5 1035 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 PROM2Q8N271 834 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 LCORLQ8N3X6 602 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 NACAP1Q9BZK3 213 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 NAPBQ9H115 298 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 CNPY2Q9Y2B0 182 aa17.46■□□□□ 0.39
ATL3-203ENST00000538786 SERPINB2P05120 415 aa17.45■□□□□ 0.38
ATL3-203ENST00000538786 ST5P78524 1137 aa17.45■□□□□ 0.38
ATL3-203ENST00000538786 HMGN5P82970 282 aaKnown RBP17.45■□□□□ 0.38
ATL3-203ENST00000538786 CDC37L1Q7L3B6 337 aa17.45■□□□□ 0.38
ATL3-203ENST00000538786 NSUN7Q8NE18 718 aaKnown RBP17.45■□□□□ 0.38
ATL3-203ENST00000538786 GDPD2Q9HCC8 539 aa17.45■□□□□ 0.38
ATL3-203ENST00000538786 SLC4A4Q9Y6R1 1079 aa17.45■□□□□ 0.38
ATL3-203ENST00000538786 CRY2Q49AN0 593 aa17.45■□□□□ 0.38
ATL3-203ENST00000538786 CTDNEP1O95476 244 aa17.44■□□□□ 0.38
ATL3-203ENST00000538786 MRE11P49959 708 aa17.44■□□□□ 0.38
ATL3-203ENST00000538786 CCT2P78371 535 aaKnown RBP17.44■□□□□ 0.38
ATL3-203ENST00000538786 CSPP1Q1MSJ5 1256 aa17.44■□□□□ 0.38
ATL3-203ENST00000538786 MIGA1Q8NAN2 632 aa17.44■□□□□ 0.38
ATL3-203ENST00000538786 RPGRQ92834 1020 aaKnown RBP17.44■□□□□ 0.38
ATL3-203ENST00000538786 GPHNQ9NQX3 736 aaPredicted RBP17.44■□□□□ 0.38
ATL3-203ENST00000538786 NAP1L2Q9ULW6 460 aaPredicted RBP17.44■□□□□ 0.38
ATL3-203ENST00000538786 KIF3AQ9Y496 699 aa17.44■□□□□ 0.38
ATL3-203ENST00000538786 IRS2Q9Y4H2 1338 aa17.44■□□□□ 0.38
ATL3-203ENST00000538786 MAGEB6P1A0A0J9YX57 407 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 PRKAB2O43741 272 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 ZNF445P59923 1031 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 ZSCAN23Q3MJ62 389 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 FAM184AQ8NB25 1140 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 TFCP2L1Q9NZI6 479 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 LEMD3Q9Y2U8 911 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 PTPDC1A2A3K4 754 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 PLSCR1O15162 318 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 TDO2P48775 406 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 DNM1Q05193 864 aaKnown RBP17.43■□□□□ 0.38
ATL3-203ENST00000538786 DDX11Q96FC9 970 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 NCOA5Q9HCD5 579 aaKnown RBP17.43■□□□□ 0.38
ATL3-203ENST00000538786 ANKIB1Q9P2G1 1089 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 BRPF3Q9ULD4 1205 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 NSFL1CQ9UNZ2 370 aaKnown RBP17.43■□□□□ 0.38
ATL3-203ENST00000538786 SALL1Q9NSC2 1324 aa17.43■□□□□ 0.38
ATL3-203ENST00000538786 KLF18A0A0U1RQI7 1052 aa17.42■□□□□ 0.38
ATL3-203ENST00000538786 TMED8Q6PL24 325 aaPredicted RBP17.42■□□□□ 0.38
ATL3-203ENST00000538786 GAS2L3Q86XJ1 694 aa17.42■□□□□ 0.38
ATL3-203ENST00000538786 CNNM2Q9H8M5 875 aa17.42■□□□□ 0.38
ATL3-203ENST00000538786 ANGEL1Q9UNK9 670 aaKnown RBP17.42■□□□□ 0.38
ATL3-203ENST00000538786 NEDD4P46934 1319 aa17.42■□□□□ 0.38
ATL3-203ENST00000538786 XDHP47989 1333 aa17.42■□□□□ 0.38
ATL3-203ENST00000538786 DHX16O60231 1041 aaKnown RBP17.41■□□□□ 0.38
ATL3-203ENST00000538786 DDR1Q08345 913 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 NAA16Q6N069 864 aaPredicted RBP17.41■□□□□ 0.38
ATL3-203ENST00000538786 CYB5R4Q7L1T6 521 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 FERMT3Q86UX7 667 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 TMEM87BQ96K49 555 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 RIOK1Q9BRS2 568 aaKnown RBP17.41■□□□□ 0.38
ATL3-203ENST00000538786 GRPEL1Q9HAV7 217 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 B4E1Z4 1266 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 H3BQV1 296 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
ATL3-203ENST00000538786 GADD45BO75293 160 aaPredicted RBP17.41■□□□□ 0.38
ATL3-203ENST00000538786 XRCC6P12956 609 aaKnown RBP eCLIP17.41■□□□□ 0.38
ATL3-203ENST00000538786 AKNAD1Q5T1N1 836 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 IFFO2Q5TF58 517 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 TXNRD3Q86VQ6 643 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
ATL3-203ENST00000538786 TMEM63CQ9P1W3 806 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
ATL3-203ENST00000538786 HPS5Q9UPZ3 1129 aa17.41■□□□□ 0.38
ATL3-203ENST00000538786 TIAM2Q8IVF5 1701 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 GOLGA8BA8MQT2 603 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 SH2B2O14492 632 aaPredicted RBP17.4■□□□□ 0.38
ATL3-203ENST00000538786 FIBPO43427 364 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 UBE2HP62256 183 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 KRT85P78386 507 aa17.4■□□□□ 0.38
ATL3-203ENST00000538786 CTDSPL2Q05D32 466 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms