RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-222ENST00000538689 SEC62Q99442 399 aaKnown RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 NYXQ9GZU5 481 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 GPCPD1Q9NPB8 672 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 TFCP2L1Q9NZI6 479 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 GOLGB1Q14789 3259 aaKnown RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 RPAP1Q9BWH6 1393 aaPredicted RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 CHGBP05060 677 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 PSMA5P28066 241 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 ARID4AP29374 1257 aaPredicted RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 SSTR3P32745 418 aaPredicted RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 RFC5P40937 340 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 MCAMP43121 646 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 NUCB2P80303 420 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 RUFY3Q7L099 469 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 FAM177A1Q8N128 213 aaPredicted RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 ZGPATQ8N5A5 531 aaKnown RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 MTMR14Q8NCE2 650 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 CDC5LQ99459 802 aaKnown RBP8.41□□□□□ -1.06
FDFT1-222ENST00000538689 STK32BQ9NY57 414 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 USTQ9Y2C2 406 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 CYP46A1Q9Y6A2 500 aa8.41□□□□□ -1.06
FDFT1-222ENST00000538689 CYP2E1P05181 493 aaPredicted RBP8.4□□□□□ -1.06
FDFT1-222ENST00000538689 ABL2P42684 1182 aa8.4□□□□□ -1.06
FDFT1-222ENST00000538689 ZAP70P43403 619 aa8.4□□□□□ -1.06
FDFT1-222ENST00000538689 CCDC102BQ68D86 513 aa8.4□□□□□ -1.06
FDFT1-222ENST00000538689 CLEC17AQ6ZS10 378 aa8.4□□□□□ -1.06
FDFT1-222ENST00000538689 DDX12PQ92771 950 aa8.4□□□□□ -1.06
FDFT1-222ENST00000538689 SRP68Q9UHB9 627 aaKnown RBP8.4□□□□□ -1.06
FDFT1-222ENST00000538689 LIMCH1Q9UPQ0 1083 aa8.4□□□□□ -1.06
FDFT1-222ENST00000538689 UQCRFS1P1P0C7P4 283 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 SLC5A1P13866 664 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.07
FDFT1-222ENST00000538689 AK2P54819 239 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 KRT32Q14532 448 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 MYSM1Q5VVJ2 828 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 TPTE2Q6XPS3 522 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 CCDC129Q6ZRS4 1044 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.07
FDFT1-222ENST00000538689 PHOX2BQ99453 314 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 DSCC1Q9BVC3 393 aa8.4□□□□□ -1.07
FDFT1-222ENST00000538689 COL24A1Q17RW2 1714 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 ARAP2Q8WZ64 1704 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 TBC1D12O60347 775 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 CPA1P15085 419 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 RFC4P35249 363 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 PHKA1P46020 1223 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 TTF1Q15361 905 aaPredicted RBP8.39□□□□□ -1.07
FDFT1-222ENST00000538689 PI16Q6UXB8 463 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 C3orf67Q6ZVT6 689 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 NBPF5PQ86XG9 351 aaPredicted RBP8.39□□□□□ -1.07
FDFT1-222ENST00000538689 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 GBP4Q96PP9 640 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
FDFT1-222ENST00000538689 PDRG1Q9NUG6 133 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 BSDC1Q9NW68 430 aaPredicted RBP8.39□□□□□ -1.07
FDFT1-222ENST00000538689 MYH7P12883 1935 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 MAST3O60307 1309 aa8.39□□□□□ -1.07
FDFT1-222ENST00000538689 DDX11L8A8MPP1 907 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 ZBTB7AO95365 584 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 HSPD1P10809 573 aaKnown RBP8.38□□□□□ -1.07
FDFT1-222ENST00000538689 CHRNDQ07001 517 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 SLFNL1Q499Z3 407 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 MSL1Q68DK7 614 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 NOL8Q76FK4 1167 aaKnown RBP8.38□□□□□ -1.07
FDFT1-222ENST00000538689 ANKRD18AQ8IVF6 992 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.38□□□□□ -1.074e-12■□□□□ 9.7
FDFT1-222ENST00000538689 ZSCAN25Q6NSZ9 544 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 APPBP2Q92624 585 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 ZSCAN31Q96LW9 406 aaPredicted RBP8.38□□□□□ -1.07
FDFT1-222ENST00000538689 NLRP3Q96P20 1036 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 SH2B1Q9NRF2 756 aaPredicted RBP8.38□□□□□ -1.07
FDFT1-222ENST00000538689 TAF6LQ9Y6J9 622 aa8.38□□□□□ -1.07
FDFT1-222ENST00000538689 CYP21A2P08686 494 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 RPS6KB1P23443 525 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 HMGB2P26583 209 aaKnown RBP8.37□□□□□ -1.07
FDFT1-222ENST00000538689 CLK2P49760 499 aaKnown RBP8.37□□□□□ -1.07
FDFT1-222ENST00000538689 PKP1Q13835 747 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 BLOC1S2Q6QNY1 142 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 BANK1Q8NDB2 785 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 TAF1P21675 1872 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 M0R2C6 588 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 SNAP23O00161 211 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 ADD2P35612 726 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 ANKRD1Q15327 319 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 UBE3CQ15386 1083 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 WASHC4Q2M389 1173 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 SPATA5Q8NB90 893 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 ZDHHC9Q9Y397 364 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 FARP1Q9Y4F1 1045 aaPredicted RBP8.37□□□□□ -1.07
FDFT1-222ENST00000538689 CARMIL3Q8ND23 1372 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 COL4A1P02462 1669 aa8.37□□□□□ -1.07
FDFT1-222ENST00000538689 UTRNP46939 3433 aa8.36□□□□□ -1.07
FDFT1-222ENST00000538689 PITPNM1O00562 1244 aa8.36□□□□□ -1.07
FDFT1-222ENST00000538689 GYS1P13807 737 aa8.36□□□□□ -1.07
FDFT1-222ENST00000538689 RPS8P62241 208 aaKnown RBP8.36□□□□□ -1.07
FDFT1-222ENST00000538689 RASGRF1Q13972 1273 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms