RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DSCC1Q9BVC3 393 aa21.42■■□□□ 1.02
SFSWAP-207ENST00000538548 MARF1Q9Y4F3 1742 aaKnown RBP21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 POLR3DP05423 398 aaPredicted RBP21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 KIFC2Q96AC6 838 aa21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 COPRSQ9NQ92 184 aa21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 H3BQF6 201 aa21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 LMOD2Q6P5Q4 547 aa21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 ABTB2Q8N961 1025 aa21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 C8orf76Q96K31 380 aa21.41■■□□□ 1.02
SFSWAP-207ENST00000538548 E7EWF7 191 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 GYS2P54840 703 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 GOLGA8FQ08AF8 430 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 GOLGA8DPQ0D2H9 430 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 AKAP4Q5JQC9 854 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 BAG1Q99933 345 aaPredicted RBP21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 RRP15Q9Y3B9 282 aaKnown RBP21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 HEG1Q9ULI3 1381 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 LMO7Q8WWI1 1683 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 STX10O60499 249 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 ISM2Q6H9L7 571 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 SYNE3Q6ZMZ3 975 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 KBTBD3Q8NAB2 608 aa21.4■■□□□ 1.02
SFSWAP-207ENST00000538548 OTUD7BQ6GQQ9 843 aa21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 DDX46Q7L014 1031 aaKnown RBP21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 PROSER2Q86WR7 435 aaPredicted RBP21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 FBXL16Q8N461 479 aa21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 USP54Q70EL1 1684 aa21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 TMEM232C9JQI7 657 aa21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 IGKV5-2P06315 115 aa21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 IVLP07476 585 aa21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 NOP2P46087 812 aaKnown RBP21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 ANO1Q5XXA6 986 aa21.39■■□□□ 1.01
SFSWAP-207ENST00000538548 LEKR1Q6ZMV7 388 aa21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 HNRNPLLQ8WVV9 542 aaKnown RBP21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 HELLSQ9NRZ9 838 aa21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 MROH7-TTC4A0A0A0MT08 1334 aa21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 TFCP2Q12800 502 aa21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 TBX2Q13207 712 aaPredicted RBP21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 PHF8Q9UPP1 1060 aa21.38■■□□□ 1.01
SFSWAP-207ENST00000538548 SYKP43405 635 aa21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 MPRIPQ6WCQ1 1025 aa21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 DHX58Q96C10 678 aa21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 DHX16O60231 1041 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 EPHA10Q5JZY3 1008 aa21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 ZNF530Q6P9A1 599 aaPredicted RBP21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 MSL3Q8N5Y2 521 aaKnown RBP21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 DDX21Q9NR30 783 aaKnown RBP eCLIP21.37■■□□□ 1.01
SFSWAP-207ENST00000538548 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 IRX3P78415 501 aaPredicted RBP21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 OLFM4Q6UX06 510 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 DBNDD2Q9BQY9 259 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 INTS13Q9NVM9 706 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 AIMP1Q12904 312 aaKnown RBP21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 TOGARAM2Q6ZUX3 1019 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 GOLGA6L1Q8N7Z2 621 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 FANCLQ9NW38 375 aa21.36■■□□□ 1.01
SFSWAP-207ENST00000538548 PLEKHG2Q9H7P9 1386 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 WDHD1O75717 1129 aaPredicted RBP21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 SLC39A14Q15043 492 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 CHST3Q7LGC8 479 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 HPSEQ9Y251 543 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 NEURL1BA8MQ27 555 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 PTPN12Q05209 780 aaKnown RBP21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 NEXNQ0ZGT2 675 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 GCKRQ14397 625 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 TICAM2Q86XR7 235 aa21.35■■□□□ 1.01
SFSWAP-207ENST00000538548 RPS6KA5O75582 802 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 RFX5P48382 616 aaPredicted RBP21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 CHMP4BP1P59074 171 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 NOM1Q5C9Z4 860 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 RIC3Q7Z5B4 369 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 TC2NQ8N9U0 490 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 CCDC12Q8WUD4 166 aaPredicted RBP21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 C19orf44Q9H6X5 657 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 POTEB2H3BUK9 544 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 RNMTO43148 476 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 HSPD1P10809 573 aaKnown RBP21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 BEND6Q5SZJ8 279 aaPredicted RBP21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 HDXQ7Z353 690 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 SRGAP1Q7Z6B7 1085 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 PDE11AQ9HCR9 933 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 VPS18Q9P253 973 aa21.34■■□□□ 1.01
SFSWAP-207ENST00000538548 ZNF142P52746 1687 aaPredicted RBP21.33■■□□□ 1.01
SFSWAP-207ENST00000538548 USP5P45974 858 aa21.33■■□□□ 1.01
SFSWAP-207ENST00000538548 KIF23Q02241 960 aaPredicted RBP21.33■■□□□ 1.01
SFSWAP-207ENST00000538548 PTPN21Q16825 1174 aa21.33■■□□□ 1.01
SFSWAP-207ENST00000538548 IP6K1Q92551 441 aa21.33■■□□□ 1.01
SFSWAP-207ENST00000538548 OVOS2A0A0G2JMS6 1433 aa21.33■■□□□ 1.01
SFSWAP-207ENST00000538548 A0A0G2JLW4 131 aa21.33■■□□□ 1
SFSWAP-207ENST00000538548 KIF28PB7ZC32 967 aa21.33■■□□□ 1
SFSWAP-207ENST00000538548 EIF3JO75822 258 aaKnown RBP21.33■■□□□ 1
SFSWAP-207ENST00000538548 PNOCQ13519 176 aa21.33■■□□□ 1
SFSWAP-207ENST00000538548 PLEKHO1Q53GL0 409 aaPredicted RBP21.33■■□□□ 1
SFSWAP-207ENST00000538548 PDILTQ8N807 584 aa21.33■■□□□ 1
SFSWAP-207ENST00000538548 RAB21Q9UL25 225 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms