RNA–Protein interactions for RNA: ENST00000538374.5

CDH20-203, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH20, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-203ENST00000538374 ZSCAN16Q9H4T2 348 aaPredicted RBP18.02■□□□□ 0.48
CDH20-203ENST00000538374 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.48
CDH20-203ENST00000538374 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDH20-203ENST00000538374 V9GYY5 206 aaPredicted RBP18.02■□□□□ 0.48
CDH20-203ENST00000538374 RNF113AO15541 343 aaKnown RBP18.02■□□□□ 0.47
CDH20-203ENST00000538374 KCNQ2O43526 872 aa18.02■□□□□ 0.47
CDH20-203ENST00000538374 CRKLP46109 303 aaKnown RBP18.02■□□□□ 0.47
CDH20-203ENST00000538374 PTPN21Q16825 1174 aa18.02■□□□□ 0.47
CDH20-203ENST00000538374 TPD52L1Q16890 204 aaPredicted RBP18.02■□□□□ 0.47
CDH20-203ENST00000538374 FAM98CQ17RN3 349 aaKnown RBP18.02■□□□□ 0.47
CDH20-203ENST00000538374 GORABQ5T7V8 394 aa18.02■□□□□ 0.47
CDH20-203ENST00000538374 DZIP3Q86Y13 1208 aaKnown RBP18.02■□□□□ 0.47
CDH20-203ENST00000538374 C8orf37Q96NL8 207 aa18.02■□□□□ 0.47
CDH20-203ENST00000538374 PUS7LQ9H0K6 701 aaKnown RBP18.02■□□□□ 0.47
CDH20-203ENST00000538374 PCDHA7Q9UN72 937 aa18.02■□□□□ 0.47
CDH20-203ENST00000538374 AOPEPQ8N6M6 819 aa18.01■□□□□ 0.47
CDH20-203ENST00000538374 SH3TC1Q8TE82 1336 aa18.01■□□□□ 0.47
CDH20-203ENST00000538374 BECN2A8MW95 431 aa18.01■□□□□ 0.47
CDH20-203ENST00000538374 GPTP24298 496 aa18.01■□□□□ 0.47
CDH20-203ENST00000538374 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
CDH20-203ENST00000538374 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
CDH20-203ENST00000538374 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
CDH20-203ENST00000538374 LY75O60449 1722 aa18.01■□□□□ 0.47
CDH20-203ENST00000538374 DHX40Q8IX18 779 aaKnown RBP18■□□□□ 0.47
CDH20-203ENST00000538374 INCENPQ9NQS7 918 aa18■□□□□ 0.47
CDH20-203ENST00000538374 FGAP02671 866 aa18■□□□□ 0.47
CDH20-203ENST00000538374 ATP6V1AP38606 617 aa18■□□□□ 0.47
CDH20-203ENST00000538374 ZAP70P43403 619 aa18■□□□□ 0.47
CDH20-203ENST00000538374 NDUFA8P51970 172 aa18■□□□□ 0.47
CDH20-203ENST00000538374 CCDC73Q6ZRK6 1079 aa18■□□□□ 0.47
CDH20-203ENST00000538374 ENGASEQ8NFI3 743 aa18■□□□□ 0.47
CDH20-203ENST00000538374 HELLSQ9NRZ9 838 aa18■□□□□ 0.47
CDH20-203ENST00000538374 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
CDH20-203ENST00000538374 LAMA4Q16363 1823 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 TAF1LQ8IZX4 1826 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
CDH20-203ENST00000538374 SDF4Q9BRK5 362 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 DSCC1Q9BVC3 393 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 AKAP11Q9UKA4 1901 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 UBE2Q2LH0YL09 131 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 TTLL11Q8NHH1 800 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 XAGE2Q96GT9 111 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 MYH7P12883 1935 aa17.99■□□□□ 0.47
CDH20-203ENST00000538374 CAMTA2O94983 1202 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 PDCL2Q8N4E4 241 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 NGLY1Q96IV0 654 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 A0A1B0GUL6 1792 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 KIF28PB7ZC32 967 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 TPM3P06753 285 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 LRRC8AQ8IWT6 810 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
CDH20-203ENST00000538374 ZHX1Q9UKY1 873 aaPredicted RBP17.98■□□□□ 0.47
CDH20-203ENST00000538374 MARCKSP29966 332 aaPredicted RBP17.97■□□□□ 0.47
CDH20-203ENST00000538374 CTSWP56202 376 aa17.97■□□□□ 0.47
CDH20-203ENST00000538374 TTC39AQ5SRH9 613 aa17.97■□□□□ 0.47
CDH20-203ENST00000538374 NAA16Q6N069 864 aaPredicted RBP17.97■□□□□ 0.47
CDH20-203ENST00000538374 SENP2Q9HC62 589 aa17.97■□□□□ 0.47
CDH20-203ENST00000538374 SALL1Q9NSC2 1324 aa17.97■□□□□ 0.47
CDH20-203ENST00000538374 NPHP1O15259 732 aa17.97■□□□□ 0.47
CDH20-203ENST00000538374 DPCR1Q3MIW9 517 aa17.97■□□□□ 0.47
CDH20-203ENST00000538374 STK11IPQ8N1F8 1099 aa17.97■□□□□ 0.47
CDH20-203ENST00000538374 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
CDH20-203ENST00000538374 LLPHQ9BRT6 129 aaKnown RBP17.97■□□□□ 0.47
CDH20-203ENST00000538374 PRC1O43663 620 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
CDH20-203ENST00000538374 SF3A1Q15459 793 aaKnown RBP17.96■□□□□ 0.47
CDH20-203ENST00000538374 STX1AQ16623 288 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 CCDC57Q2TAC2 916 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 GOLGA8BA8MQT2 603 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 SKILP12757 684 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 PDIA4P13667 645 aaKnown RBP17.96■□□□□ 0.47
CDH20-203ENST00000538374 ANTXR2P58335 489 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 FAM160A1Q05DH4 1040 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 NCBP1Q09161 790 aaKnown RBP17.96■□□□□ 0.47
CDH20-203ENST00000538374 AGXT2Q9BYV1 514 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 GREM2Q9H772 168 aa17.96■□□□□ 0.47
CDH20-203ENST00000538374 COL4A1P02462 1669 aa17.96■□□□□ 0.46
CDH20-203ENST00000538374 SNAP23O00161 211 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
CDH20-203ENST00000538374 MTERF4Q7Z6M4 381 aaKnown RBP17.95■□□□□ 0.46
CDH20-203ENST00000538374 ORC3Q9UBD5 711 aaPredicted RBP17.95■□□□□ 0.46
CDH20-203ENST00000538374 PRDM4Q9UKN5 801 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 HPS5Q9UPZ3 1129 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 CCDC69A6NI79 296 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 STK38Q15208 465 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 RIPOR2Q9Y4F9 1068 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 FMR1NBQ8N0W7 255 aaPredicted RBP17.95■□□□□ 0.46
CDH20-203ENST00000538374 LINC00116Q8NCU8 138 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.95■□□□□ 0.46
CDH20-203ENST00000538374 C8orf76Q96K31 380 aa17.95■□□□□ 0.46
CDH20-203ENST00000538374 IFIT5Q13325 482 aaKnown RBP17.94■□□□□ 0.46
CDH20-203ENST00000538374 TAF7LQ5H9L4 462 aa17.94■□□□□ 0.46
CDH20-203ENST00000538374 ZNF396Q96N95 335 aaPredicted RBP17.94■□□□□ 0.46
CDH20-203ENST00000538374 MYL10Q9BUA6 226 aa17.94■□□□□ 0.46
CDH20-203ENST00000538374 TRMT112Q9UI30 125 aaKnown RBP17.94■□□□□ 0.46
CDH20-203ENST00000538374 PDE8AO60658 829 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms