RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 MARF1Q9Y4F3 1742 aaKnown RBP20.47■□□□□ 0.87
TRA2A-211ENST00000538367 LAMA4Q16363 1823 aa20.47■□□□□ 0.87
TRA2A-211ENST00000538367 A0A087WUV0 522 aaPredicted RBP20.47■□□□□ 0.87
TRA2A-211ENST00000538367 A0A087WWV3 80 aa20.47■□□□□ 0.87
TRA2A-211ENST00000538367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.47■□□□□ 0.87
TRA2A-211ENST00000538367 HSP90B2PQ58FF3 399 aa20.47■□□□□ 0.87
TRA2A-211ENST00000538367 FTOQ9C0B1 505 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRA2A-211ENST00000538367 KDM3BQ7LBC6 1761 aa20.46■□□□□ 0.87
TRA2A-211ENST00000538367 CUTAO60888 179 aa20.46■□□□□ 0.87
TRA2A-211ENST00000538367 GSCP56915 257 aaPredicted RBP20.46■□□□□ 0.87
TRA2A-211ENST00000538367 TAF6LQ9Y6J9 622 aa20.46■□□□□ 0.87
TRA2A-211ENST00000538367 SERPINC1P01008 464 aa20.45■□□□□ 0.86
TRA2A-211ENST00000538367 ILDR1Q86SU0 546 aaPredicted RBP20.45■□□□□ 0.86
TRA2A-211ENST00000538367 DHX58Q96C10 678 aa20.45■□□□□ 0.86
TRA2A-211ENST00000538367 EPC1Q9H2F5 836 aa20.45■□□□□ 0.86
TRA2A-211ENST00000538367 VIPAS39Q9H9C1 493 aa20.45■□□□□ 0.86
TRA2A-211ENST00000538367 LMOD1P29536 600 aaPredicted RBP20.45■□□□□ 0.86
TRA2A-211ENST00000538367 CFAP100Q494V2 611 aa20.45■□□□□ 0.86
TRA2A-211ENST00000538367 TICAM2Q86XR7 235 aa20.45■□□□□ 0.86
TRA2A-211ENST00000538367 ERCC4Q92889 916 aaPredicted RBP20.45■□□□□ 0.86
TRA2A-211ENST00000538367 PHAXQ9H814 394 aaKnown RBP20.45■□□□□ 0.86
TRA2A-211ENST00000538367 ANKZF1Q9H8Y5 726 aa20.45■□□□□ 0.86
TRA2A-211ENST00000538367 BRAPQ7Z569 592 aa20.44■□□□□ 0.86
TRA2A-211ENST00000538367 TADA2BQ86TJ2 420 aa20.44■□□□□ 0.86
TRA2A-211ENST00000538367 A0A1B0GVL5 298 aa20.44■□□□□ 0.86
TRA2A-211ENST00000538367 CTDNEP1O95476 244 aa20.44■□□□□ 0.86
TRA2A-211ENST00000538367 CMA1P23946 247 aa20.44■□□□□ 0.86
TRA2A-211ENST00000538367 STK38Q15208 465 aa20.44■□□□□ 0.86
TRA2A-211ENST00000538367 ZNF589Q86UQ0 364 aaPredicted RBP20.44■□□□□ 0.86
TRA2A-211ENST00000538367 CDC23Q9UJX2 597 aa20.44■□□□□ 0.86
TRA2A-211ENST00000538367 TRPM3Q9HCF6 1732 aaPredicted RBP20.44■□□□□ 0.86
TRA2A-211ENST00000538367 LOC102724159A0A0B4J2E5 919 aa20.43■□□□□ 0.86
TRA2A-211ENST00000538367 ZNF202O95125 648 aa20.43■□□□□ 0.86
TRA2A-211ENST00000538367 USP8P40818 1118 aa20.43■□□□□ 0.86
TRA2A-211ENST00000538367 PWP2Q15269 919 aaKnown RBP20.43■□□□□ 0.86
TRA2A-211ENST00000538367 SF3A1Q15459 793 aaKnown RBP20.43■□□□□ 0.86
TRA2A-211ENST00000538367 LRRC31Q6UY01 552 aa20.43■□□□□ 0.86
TRA2A-211ENST00000538367 DHX32Q7L7V1 743 aaKnown RBP20.43■□□□□ 0.86
TRA2A-211ENST00000538367 ABTB2Q8N961 1025 aa20.43■□□□□ 0.86
TRA2A-211ENST00000538367 CTCFLQ8NI51 663 aaPredicted RBP20.43■□□□□ 0.86
TRA2A-211ENST00000538367 NECTIN2Q92692 538 aa20.43■□□□□ 0.86
TRA2A-211ENST00000538367 SECISBP2LQ93073 1101 aaKnown RBP20.43■□□□□ 0.86
TRA2A-211ENST00000538367 FAN1Q9Y2M0 1017 aa20.43■□□□□ 0.86
TRA2A-211ENST00000538367 CARMIL3Q8ND23 1372 aa20.42■□□□□ 0.86
TRA2A-211ENST00000538367 NLRP6P59044 892 aa20.42■□□□□ 0.86
TRA2A-211ENST00000538367 DNAJC21Q5F1R6 531 aaKnown RBP20.42■□□□□ 0.86
TRA2A-211ENST00000538367 ZNF274Q96GC6 653 aaPredicted RBP20.42■□□□□ 0.86
TRA2A-211ENST00000538367 AKAP2Q9Y2D5 859 aa20.42■□□□□ 0.86
TRA2A-211ENST00000538367 AARSP49588 968 aaKnown RBP eCLIP20.42■□□□□ 0.86
TRA2A-211ENST00000538367 TACO1Q9BSH4 297 aaKnown RBP20.42■□□□□ 0.86
TRA2A-211ENST00000538367 SPTLC2O15270 562 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 KIF1CO43896 1103 aaKnown RBP20.41■□□□□ 0.86
TRA2A-211ENST00000538367 ATP1A3P13637 1013 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 FBXL16Q8N461 479 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 CCDC12Q8WUD4 166 aaPredicted RBP20.41■□□□□ 0.86
TRA2A-211ENST00000538367 ZBTB9Q96C00 473 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 DRC1Q96MC2 740 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 FAM237AA0A1B0GTK4 181 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 MCM6Q14566 821 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 ELOA2Q8IYF1 753 aaPredicted RBP20.41■□□□□ 0.86
TRA2A-211ENST00000538367 FBXW7Q969H0 707 aa20.41■□□□□ 0.86
TRA2A-211ENST00000538367 NAA15Q9BXJ9 866 aaKnown RBP20.41■□□□□ 0.86
TRA2A-211ENST00000538367 CCDC175P0C221 793 aa20.4■□□□□ 0.86
TRA2A-211ENST00000538367 G3BP1Q13283 466 aaKnown RBP eCLIP20.4■□□□□ 0.86
TRA2A-211ENST00000538367 CNNM3Q8NE01 707 aa20.4■□□□□ 0.86
TRA2A-211ENST00000538367 EAF2Q96CJ1 260 aaPredicted RBP20.4■□□□□ 0.86
TRA2A-211ENST00000538367 FMNL2Q96PY5 1086 aa20.4■□□□□ 0.86
TRA2A-211ENST00000538367 UTYO14607 1347 aa20.4■□□□□ 0.86
TRA2A-211ENST00000538367 CEMIPQ8WUJ3 1361 aa20.4■□□□□ 0.86
TRA2A-211ENST00000538367 PI4KAP2A4QPH2 592 aa20.39■□□□□ 0.86
TRA2A-211ENST00000538367 CASP8Q14790 479 aa20.39■□□□□ 0.86
TRA2A-211ENST00000538367 OLFM4Q6UX06 510 aa20.39■□□□□ 0.86
TRA2A-211ENST00000538367 PI4KAP1Q8N8J0 262 aa20.39■□□□□ 0.86
TRA2A-211ENST00000538367 DPF2Q92785 391 aa20.39■□□□□ 0.86
TRA2A-211ENST00000538367 ZNF622Q969S3 477 aaKnown RBP eCLIP20.39■□□□□ 0.865e-11■■□□□ 13.7
TRA2A-211ENST00000538367 KRT28Q7Z3Y7 464 aa20.39■□□□□ 0.85
TRA2A-211ENST00000538367 ARHGEF25Q86VW2 580 aa20.39■□□□□ 0.85
TRA2A-211ENST00000538367 EYA1Q99502 592 aa20.39■□□□□ 0.85
TRA2A-211ENST00000538367 SASH1O94885 1247 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 CYP21A2P08686 494 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 CCDC172P0C7W6 258 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 MCM3P25205 808 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 WHAMMP3Q1A5X7 153 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 SPECC1LQ69YQ0 1117 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 WDR93Q6P2C0 686 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 TC2NQ8N9U0 490 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 MAP3K15Q6ZN16 1313 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 CCDC196A0A1B0GTZ2 297 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 WDHD1O75717 1129 aaPredicted RBP20.38■□□□□ 0.85
TRA2A-211ENST00000538367 PFKFB1P16118 471 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 PIP4K2BP78356 416 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 EXOSC10Q01780 885 aaKnown RBP20.38■□□□□ 0.85
TRA2A-211ENST00000538367 SF3B2Q13435 895 aaKnown RBP20.38■□□□□ 0.85
TRA2A-211ENST00000538367 PANX2Q96RD6 677 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 ABCB6Q9NP58 842 aa20.38■□□□□ 0.85
TRA2A-211ENST00000538367 RNF216Q9NWF9 866 aaPredicted RBP20.38■□□□□ 0.85
TRA2A-211ENST00000538367 COL15A1P39059 1388 aa20.37■□□□□ 0.85
TRA2A-211ENST00000538367 KIF5CO60282 957 aa20.37■□□□□ 0.85
TRA2A-211ENST00000538367 FOXR1Q6PIV2 292 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms