RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 IFT172Q9UG01 1749 aa11.53□□□□□ -0.56
GGA3-201ENST00000537686 RIMBP2O15034 1052 aa11.52□□□□□ -0.56
GGA3-201ENST00000537686 RRP9O43818 475 aaKnown RBP11.52□□□□□ -0.56
GGA3-201ENST00000537686 PHKG2P15735 406 aa11.52□□□□□ -0.56
GGA3-201ENST00000537686 CCDC178Q5BJE1 867 aa11.52□□□□□ -0.56
GGA3-201ENST00000537686 EHMT1Q9H9B1 1298 aa11.52□□□□□ -0.56
GGA3-201ENST00000537686 LIG1P18858 919 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
GGA3-201ENST00000537686 LEKR1Q6ZMV7 388 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 CCDC102AQ96A19 550 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 TMX1Q9H3N1 280 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 CCNL1Q9UK58 526 aaPredicted RBP11.52□□□□□ -0.57
GGA3-201ENST00000537686 C3P01024 1663 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 B4E1Z4 1266 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 PDE8AO60658 829 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 UBASH3AP57075 661 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 XAGE2Q96GT9 111 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.57
GGA3-201ENST00000537686 LRRC7Q96NW7 1537 aa11.52□□□□□ -0.57
GGA3-201ENST00000537686 TRAPPC3LQ5T215 181 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 FAM173BQ6P4H8 233 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 TMCO3Q6UWJ1 677 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 CCDC186Q7Z3E2 898 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 APPBP2Q92624 585 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 ZNF830Q96NB3 372 aaPredicted RBP11.51□□□□□ -0.57
GGA3-201ENST00000537686 ANKRD2Q9GZV1 360 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 UBR1Q8IWV7 1749 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 USO1O60763 962 aaKnown RBP11.51□□□□□ -0.57
GGA3-201ENST00000537686 PLCG2P16885 1265 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 STAT6P42226 847 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 CNBD1Q8NA66 436 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 EDC3Q96F86 508 aaKnown RBP11.51□□□□□ -0.57
GGA3-201ENST00000537686 CWC15Q9P013 229 aaKnown RBP11.51□□□□□ -0.57
GGA3-201ENST00000537686 CALML3P27482 149 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
GGA3-201ENST00000537686 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
GGA3-201ENST00000537686 TAF3Q5VWG9 929 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 RRAGBQ5VZM2 374 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 PPP4R3AQ6IN85 833 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 AOPEPQ8N6M6 819 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 DHX58Q96C10 678 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 HELLSQ9NRZ9 838 aa11.51□□□□□ -0.57
GGA3-201ENST00000537686 GPAA1O43292 621 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 TAF5LO75529 589 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 SLC27A2O14975 620 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 POTEJP0CG39 1038 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 CALM1P0DP23 149 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 CALM2P0DP24 149 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 CALM3P0DP25 149 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 USP8P40818 1118 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 PAFAH1B1P43034 410 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 TYRO3Q06418 890 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 TAX1BP1Q86VP1 789 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 CRACR2AQ9BSW2 395 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 MYOM1P52179 1685 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 PRDM1O75626 825 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 CETN1Q12798 172 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 NCOA5Q9HCD5 579 aaKnown RBP11.5□□□□□ -0.57
GGA3-201ENST00000537686 EXOC1Q9NV70 894 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 SNX14Q9Y5W7 946 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 CCDC66A2RUB6 948 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.5□□□□□ -0.57
GGA3-201ENST00000537686 TTC12Q9H892 705 aaPredicted RBP11.5□□□□□ -0.57
GGA3-201ENST00000537686 VEZTQ9HBM0 779 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 HDAC9Q9UKV0 1011 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 ABCC4O15439 1325 aa11.5□□□□□ -0.57
GGA3-201ENST00000537686 NEURL1BA8MQ27 555 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 AKR1B10O60218 316 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 TRIM21P19474 475 aaKnown RBP11.49□□□□□ -0.57
GGA3-201ENST00000537686 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 TNNI2P48788 182 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 JAKMIP3Q5VZ66 844 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 SYCP3Q8IZU3 236 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 CCDC87Q9NVE4 849 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 WDHD1O75717 1129 aaPredicted RBP11.49□□□□□ -0.57
GGA3-201ENST00000537686 CASQ1P31415 396 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 CETN2P41208 172 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 GNG11P61952 73 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 ASIC1P78348 528 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
GGA3-201ENST00000537686 HIBADHP31937 336 aaKnown RBP11.49□□□□□ -0.57
GGA3-201ENST00000537686 SNW1Q13573 536 aaKnown RBP11.49□□□□□ -0.57
GGA3-201ENST00000537686 SSH3Q8TE77 659 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 ARMT1Q9H993 441 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 RMND1Q9NWS8 449 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 DENND2AQ9ULE3 1009 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 PARP3Q9Y6F1 533 aa11.49□□□□□ -0.57
GGA3-201ENST00000537686 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 AOX1Q06278 1338 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 MACROD2A1Z1Q3 448 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 SKILP12757 684 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 TRAF1Q13077 416 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 ERMNQ8TAM6 284 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 GBP3Q9H0R5 595 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 C6orf50Q9HD87 102 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 WDR17Q8IZU2 1322 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 PSMA7O14818 248 aa11.48□□□□□ -0.57
GGA3-201ENST00000537686 BRAPQ7Z569 592 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms