RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 DENND2AQ9ULE3 1009 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 WDR19Q8NEZ3 1342 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 CDHR2Q9BYE9 1310 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 KIF28PB7ZC32 967 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 STARD3NLO95772 234 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 HSPA2P54652 639 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 SLC9C2Q5TAH2 1124 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 CCDC94Q9BW85 323 aaPredicted RBP16.67■□□□□ 0.26
USP44-203ENST00000537435 NAT10Q9H0A0 1025 aaKnown RBP16.67■□□□□ 0.26
USP44-203ENST00000537435 CNNM1Q9NRU3 951 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 TRDNQ13061 729 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 TPD52L1Q16890 204 aaPredicted RBP16.67■□□□□ 0.26
USP44-203ENST00000537435 NLRP10Q86W26 655 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 ZMYND15Q9H091 742 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 NBPF3Q9H094 633 aa16.67■□□□□ 0.26
USP44-203ENST00000537435 ANKRD18BA2A2Z9 1011 aa16.66■□□□□ 0.26
USP44-203ENST00000537435 CTIFO43310 598 aaKnown RBP16.66■□□□□ 0.26
USP44-203ENST00000537435 KIF23Q02241 960 aaPredicted RBP16.66■□□□□ 0.26
USP44-203ENST00000537435 SYNE3Q6ZMZ3 975 aa16.66■□□□□ 0.26
USP44-203ENST00000537435 FILIP1Q7Z7B0 1213 aa16.66■□□□□ 0.26
USP44-203ENST00000537435 KIAA1468Q9P260 1216 aa16.66■□□□□ 0.26
USP44-203ENST00000537435 NEMFO60524 1076 aa16.65■□□□□ 0.26
USP44-203ENST00000537435 CTSWP56202 376 aa16.65■□□□□ 0.26
USP44-203ENST00000537435 TBC1D10CQ8IV04 446 aa16.65■□□□□ 0.26
USP44-203ENST00000537435 TOGARAM1Q9Y4F4 1720 aa16.65■□□□□ 0.26
USP44-203ENST00000537435 IDH1O75874 414 aaKnown RBP16.65■□□□□ 0.26
USP44-203ENST00000537435 ANO1Q5XXA6 986 aa16.65■□□□□ 0.26
USP44-203ENST00000537435 NKX2-3Q8TAU0 364 aa16.65■□□□□ 0.26
USP44-203ENST00000537435 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
USP44-203ENST00000537435 ANGEL1Q9UNK9 670 aaKnown RBP16.65■□□□□ 0.26
USP44-203ENST00000537435 NEDD4P46934 1319 aa16.65■□□□□ 0.26
USP44-203ENST00000537435 SMTNL1A8MU46 457 aa16.64■□□□□ 0.26
USP44-203ENST00000537435 APPP05067 770 aa16.64■□□□□ 0.26
USP44-203ENST00000537435 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.26
USP44-203ENST00000537435 ZRSR1Q15695 479 aaKnown RBP16.64■□□□□ 0.26
USP44-203ENST00000537435 DPCR1Q3MIW9 517 aa16.64■□□□□ 0.26
USP44-203ENST00000537435 CYB5R4Q7L1T6 521 aa16.64■□□□□ 0.26
USP44-203ENST00000537435 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.26
USP44-203ENST00000537435 ZNF512BQ96KM6 892 aaPredicted RBP16.64■□□□□ 0.26
USP44-203ENST00000537435 CCDC69A6NI79 296 aa16.64■□□□□ 0.25
USP44-203ENST00000537435 IRS4O14654 1257 aaPredicted RBP16.64■□□□□ 0.25
USP44-203ENST00000537435 RBM6P78332 1123 aaKnown RBP16.64■□□□□ 0.25
USP44-203ENST00000537435 AIFM3Q96NN9 605 aa16.64■□□□□ 0.25
USP44-203ENST00000537435 ZMYM6O95789 1325 aa16.64■□□□□ 0.25
USP44-203ENST00000537435 ZNF202O95125 648 aa16.63■□□□□ 0.25
USP44-203ENST00000537435 SKILP12757 684 aa16.63■□□□□ 0.25
USP44-203ENST00000537435 METAP2P50579 478 aaKnown RBP eCLIP16.63■□□□□ 0.25
USP44-203ENST00000537435 UBE3CQ15386 1083 aa16.63■□□□□ 0.25
USP44-203ENST00000537435 SLAIN2Q9P270 581 aa16.63■□□□□ 0.25
USP44-203ENST00000537435 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
USP44-203ENST00000537435 SH2B2O14492 632 aaPredicted RBP16.63■□□□□ 0.25
USP44-203ENST00000537435 RXRAP19793 462 aa16.63■□□□□ 0.25
USP44-203ENST00000537435 AXDND1Q5T1B0 1012 aaPredicted RBP16.63■□□□□ 0.25
USP44-203ENST00000537435 ALG1Q9BT22 464 aa16.63■□□□□ 0.25
USP44-203ENST00000537435 TRMT112Q9UI30 125 aaKnown RBP16.63■□□□□ 0.25
USP44-203ENST00000537435 PDE8BO95263 885 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 SLC3A2P08195 630 aaKnown RBP16.62■□□□□ 0.25
USP44-203ENST00000537435 PHKA1P46020 1223 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 CCDC102BQ68D86 513 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 ANKRD7Q92527 254 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 ATRNO75882 1429 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 USP27XA6NNY8 438 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 B4E1Z4 1266 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 BIN1O00499 593 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 PFKFB1P16118 471 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 CMA1P23946 247 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 CCZ1BP86790 482 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 CCZ1P86791 482 aaPredicted RBP16.62■□□□□ 0.25
USP44-203ENST00000537435 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 WWC3Q9ULE0 1092 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 PAXBP1Q9Y5B6 917 aa16.62■□□□□ 0.25
USP44-203ENST00000537435 WDHD1O75717 1129 aaPredicted RBP16.61■□□□□ 0.25
USP44-203ENST00000537435 PDE6AP16499 860 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 MARCKSP29966 332 aaPredicted RBP16.61■□□□□ 0.25
USP44-203ENST00000537435 PPP4R3BQ5MIZ7 849 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 BPIFA3Q9BQP9 254 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 TBC1D2BQ9UPU7 963 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 XIRP1Q702N8 1843 aaKnown RBP16.61■□□□□ 0.25
USP44-203ENST00000537435 CDC27P30260 824 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 SLC39A14Q15043 492 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 CEP135Q66GS9 1140 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 APOA5Q6Q788 366 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 NBPF11Q86T75 865 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 MICU3Q86XE3 530 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 VPS37DQ86XT2 251 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 SLC4A9Q96Q91 983 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 AKAP11Q9UKA4 1901 aa16.61■□□□□ 0.25
USP44-203ENST00000537435 PDE8AO60658 829 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 CDKL5O76039 1030 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 ARID4AP29374 1257 aaPredicted RBP16.6■□□□□ 0.25
USP44-203ENST00000537435 NLRP12P59046 1061 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 KRT40Q6A162 431 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 RGS22Q8NE09 1264 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 PHKBQ93100 1093 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 MYH7P12883 1935 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 MROH7-TTC4A0A0A0MT08 1334 aa16.6■□□□□ 0.25
USP44-203ENST00000537435 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms