RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 FEZ1Q99689 392 aa4.72□□□□□ -1.65
SEC23A-202ENST00000537403 UTP14AQ9BVJ6 771 aaKnown RBP4.72□□□□□ -1.65
SEC23A-202ENST00000537403 DEF6Q9H4E7 631 aa4.72□□□□□ -1.65
SEC23A-202ENST00000537403 GRPEL1Q9HAV7 217 aa4.72□□□□□ -1.65
SEC23A-202ENST00000537403 VAT1LQ9HCJ6 419 aa4.72□□□□□ -1.65
SEC23A-202ENST00000537403 TFCP2L1Q9NZI6 479 aa4.72□□□□□ -1.65
SEC23A-202ENST00000537403 MYH14Q7Z406 1995 aaKnown RBP4.72□□□□□ -1.65
SEC23A-202ENST00000537403 ZNF646O15015 1829 aaPredicted RBP4.72□□□□□ -1.65
SEC23A-202ENST00000537403 IRS4O14654 1257 aaPredicted RBP4.71□□□□□ -1.65
SEC23A-202ENST00000537403 IL13P35225 146 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 SSRP1Q08945 709 aaKnown RBP4.71□□□□□ -1.65
SEC23A-202ENST00000537403 CAMK4Q16566 473 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 SLC4A8Q2Y0W8 1093 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 NOM1Q5C9Z4 860 aaKnown RBP4.71□□□□□ -1.65
SEC23A-202ENST00000537403 SLC9C2Q5TAH2 1124 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 ZNF790Q6PG37 636 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 RAB11FIP4Q86YS3 637 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 CCDC144CPQ8IYA2 1237 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 MARCH10Q8NA82 808 aaPredicted RBP4.71□□□□□ -1.65
SEC23A-202ENST00000537403 BRF1Q92994 677 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 RUFY1Q96T51 708 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 CDCA7Q9BWT1 371 aaPredicted RBP4.71□□□□□ -1.65
SEC23A-202ENST00000537403 ZC3H12CQ9C0D7 883 aaKnown RBP4.71□□□□□ -1.65
SEC23A-202ENST00000537403 CABP5Q9NP86 173 aa4.71□□□□□ -1.65
SEC23A-202ENST00000537403 COL3A1P02461 1466 aaPredicted RBP4.71□□□□□ -1.65
SEC23A-202ENST00000537403 COL11A2P13942 1736 aaPredicted RBP4.71□□□□□ -1.66
SEC23A-202ENST00000537403 SYCE3A1L190 88 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 WDHD1O75717 1129 aaPredicted RBP4.71□□□□□ -1.66
SEC23A-202ENST00000537403 HLA-DOAP06340 250 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 SSFA2P28290 1259 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 TNNT3P45378 269 aaPredicted RBP4.71□□□□□ -1.66
SEC23A-202ENST00000537403 E2F4Q16254 413 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 PPP1R15BQ5SWA1 713 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 CRNKL1Q9BZJ0 848 aaKnown RBP4.71□□□□□ -1.66
SEC23A-202ENST00000537403 DCTPP1Q9H773 170 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 LUC7LQ9NQ29 371 aaKnown RBP4.71□□□□□ -1.66
SEC23A-202ENST00000537403 HMG20BQ9P0W2 317 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 KDM3BQ7LBC6 1761 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 SMTNL1A8MU46 457 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 KIF5BP33176 963 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 MCM5P33992 734 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 KLHL10Q6JEL2 608 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 G2E3Q7L622 706 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 RAB34Q9BZG1 259 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 LGR6Q9HBX8 967 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 GDPD2Q9HCC8 539 aa4.71□□□□□ -1.66
SEC23A-202ENST00000537403 F8W031 263 aaPredicted RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 CCP110O43303 1012 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 CBFA2T2O43439 604 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 TNIP1Q15025 636 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 CFAP100Q494V2 611 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 MCMDC2Q4G0Z9 681 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 HSP90B2PQ58FF3 399 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 NAA16Q6N069 864 aaPredicted RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 CEP85Q6P2H3 762 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 FAM177A1Q8N128 213 aaPredicted RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 FAM89AQ96GI7 184 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 TBC1D32Q96NH3 1257 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 LRRC2Q9BYS8 371 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 KAT14Q9H8E8 782 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 ZBTB40Q9NUA8 1239 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 RYDENQ9NUL5 291 aaKnown RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 BRPF3Q9ULD4 1205 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 WWC3Q9ULE0 1092 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 RBM8AQ9Y5S9 174 aaKnown RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 PCDH11XQ9BZA7 1347 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 PCDH11YQ9BZA8 1340 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 WDR90Q96KV7 1748 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 STX6O43752 255 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 GJB2P29033 226 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 METAP2P50579 478 aaKnown RBP eCLIP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 EIF5P55010 431 aaKnown RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 PLPP6Q8IY26 295 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 OGFOD1Q8N543 542 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 PAF1Q8N7H5 531 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 ESYT1Q9BSJ8 1104 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 NYXQ9GZU5 481 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 GPHNQ9NQX3 736 aaPredicted RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 KCPQ6ZWJ8 1503 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 KLF18A0A0U1RQI7 1052 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 A1BGP04217 495 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 CHMP4BP1P59074 171 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 GSTO1P78417 241 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 WTAPQ15007 396 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 PTF1AQ7RTS3 328 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 ZGPATQ8N5A5 531 aaKnown RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 NECAB1Q8N987 351 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 TNPO1Q92973 898 aaKnown RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 CUL5Q93034 780 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 SLC26A6Q9BXS9 759 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 ACBD3Q9H3P7 528 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.7□□□□□ -1.661e-13■■■■■ 224.2
SEC23A-202ENST00000537403 SLC4A4Q9Y6R1 1079 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 FER1L6Q2WGJ9 1857 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 CHL1O00533 1208 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 GNPATO15228 680 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 MYO1BO43795 1136 aa4.7□□□□□ -1.66
SEC23A-202ENST00000537403 PRIM1P49642 420 aaKnown RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 EN1Q05925 392 aaPredicted RBP4.7□□□□□ -1.66
SEC23A-202ENST00000537403 C3orf67Q6ZVT6 689 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms