RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 STK3Q13188 491 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 BRD3Q15059 726 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 CHMP4CQ96CF2 233 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 TLR7Q9NYK1 1049 aaKnown RBP18.01■□□□□ 0.47
CHFR-213ENST00000536843 MRFAP1Q9Y605 127 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 LTBP4Q8N2S1 1624 aa18.01■□□□□ 0.47
CHFR-213ENST00000536843 SOS2Q07890 1332 aaPredicted RBP18.01■□□□□ 0.47
CHFR-213ENST00000536843 PPP2R3AQ06190 1150 aa18■□□□□ 0.47
CHFR-213ENST00000536843 DDX11Q96FC9 970 aa18■□□□□ 0.47
CHFR-213ENST00000536843 EIF3CLB5ME19 914 aaKnown RBP18■□□□□ 0.47
CHFR-213ENST00000536843 ZSCAN12O43309 604 aa18■□□□□ 0.47
CHFR-213ENST00000536843 CEBPZQ03701 1054 aaKnown RBP18■□□□□ 0.47
CHFR-213ENST00000536843 FSIP1Q8NA03 581 aa18■□□□□ 0.47
CHFR-213ENST00000536843 PPM1EQ8WY54 764 aa18■□□□□ 0.47
CHFR-213ENST00000536843 EIF3CQ99613 913 aaKnown RBP18■□□□□ 0.47
CHFR-213ENST00000536843 VWA3AA6NCI4 1184 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 CABP4P57796 275 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 NAA16Q6N069 864 aaPredicted RBP17.99■□□□□ 0.47
CHFR-213ENST00000536843 HNRNPLLQ8WVV9 542 aaKnown RBP17.99■□□□□ 0.47
CHFR-213ENST00000536843 FMNL2Q96PY5 1086 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 MKRN1Q9UHC7 482 aaKnown RBP17.99■□□□□ 0.47
CHFR-213ENST00000536843 APOBRQ0VD83 1088 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 DPCR1Q3MIW9 517 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 SUGP1Q8IWZ8 645 aaKnown RBP17.99■□□□□ 0.47
CHFR-213ENST00000536843 FMR1NBQ8N0W7 255 aaPredicted RBP17.99■□□□□ 0.47
CHFR-213ENST00000536843 GOLGA1Q92805 767 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 JCADQ9P266 1359 aa17.99■□□□□ 0.47
CHFR-213ENST00000536843 TXLNAP40222 546 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 CORO7P57737 925 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
CHFR-213ENST00000536843 ABCC6O95255 1503 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 GOLGA6L9A6NEM1 432 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 CPP00450 1065 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
CHFR-213ENST00000536843 NCAPHQ15003 741 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 KIAA1468Q9P260 1216 aa17.98■□□□□ 0.47
CHFR-213ENST00000536843 ZNF396Q96N95 335 aaPredicted RBP17.97■□□□□ 0.47
CHFR-213ENST00000536843 USP28Q96RU2 1077 aa17.97■□□□□ 0.47
CHFR-213ENST00000536843 FTOQ9C0B1 505 aaKnown RBP eCLIP17.97■□□□□ 0.47
CHFR-213ENST00000536843 BOLA2Q9H3K6 86 aa17.97■□□□□ 0.47
CHFR-213ENST00000536843 MRPS27Q92552 414 aaKnown RBP17.97■□□□□ 0.47
CHFR-213ENST00000536843 ERCC4Q92889 916 aaPredicted RBP17.97■□□□□ 0.47
CHFR-213ENST00000536843 DEF6Q9H4E7 631 aa17.97■□□□□ 0.47
CHFR-213ENST00000536843 VPS18Q9P253 973 aa17.97■□□□□ 0.47
CHFR-213ENST00000536843 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
CHFR-213ENST00000536843 MRC1P22897 1456 aa17.96■□□□□ 0.47
CHFR-213ENST00000536843 FANCCQ00597 558 aa17.96■□□□□ 0.47
CHFR-213ENST00000536843 FBXW7Q969H0 707 aa17.96■□□□□ 0.47
CHFR-213ENST00000536843 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
CHFR-213ENST00000536843 LLPHQ9BRT6 129 aaKnown RBP17.96■□□□□ 0.47
CHFR-213ENST00000536843 UTP14AQ9BVJ6 771 aaKnown RBP17.96■□□□□ 0.47
CHFR-213ENST00000536843 MED23Q9ULK4 1368 aa17.96■□□□□ 0.46
CHFR-213ENST00000536843 ATP5J2-PTCD1G3V325 749 aa17.96■□□□□ 0.46
CHFR-213ENST00000536843 IKBKBO14920 756 aa17.96■□□□□ 0.46
CHFR-213ENST00000536843 PTCD1O75127 700 aaKnown RBP17.96■□□□□ 0.46
CHFR-213ENST00000536843 ZRSR1Q15695 479 aaKnown RBP17.96■□□□□ 0.46
CHFR-213ENST00000536843 SWT1Q5T5J6 900 aaKnown RBP17.96■□□□□ 0.46
CHFR-213ENST00000536843 DRC1Q96MC2 740 aa17.96■□□□□ 0.46
CHFR-213ENST00000536843 PPP2R2CQ9Y2T4 447 aa17.96■□□□□ 0.46
CHFR-213ENST00000536843 CPDO75976 1380 aa17.95■□□□□ 0.46
CHFR-213ENST00000536843 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
CHFR-213ENST00000536843 WDR24Q96S15 920 aa17.95■□□□□ 0.46
CHFR-213ENST00000536843 PDE11AQ9HCR9 933 aa17.95■□□□□ 0.46
CHFR-213ENST00000536843 NHSL1Q5SYE7 1610 aa17.95■□□□□ 0.46
CHFR-213ENST00000536843 NEDD4P46934 1319 aa17.95■□□□□ 0.46
CHFR-213ENST00000536843 A0A1W2PQ27 194 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 A0A1W2PQ64 194 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 A0A1W2PQD8 194 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 USP5P45974 858 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 ME1P48163 572 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 KRT32Q14532 448 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 FOXR1Q6PIV2 292 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 HDXQ7Z353 690 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 KIFC2Q96AC6 838 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 EIF3JO75822 258 aaKnown RBP17.94■□□□□ 0.46
CHFR-213ENST00000536843 RFX5P48382 616 aaPredicted RBP17.94■□□□□ 0.46
CHFR-213ENST00000536843 NLRP12P59046 1061 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 BEND6Q5SZJ8 279 aaPredicted RBP17.94■□□□□ 0.46
CHFR-213ENST00000536843 AXDND1Q5T1B0 1012 aaPredicted RBP17.94■□□□□ 0.46
CHFR-213ENST00000536843 TMEM139Q8IV31 216 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 TOMM22Q9NS69 142 aa17.94■□□□□ 0.46
CHFR-213ENST00000536843 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
CHFR-213ENST00000536843 CBFA2T2O43439 604 aa17.93■□□□□ 0.46
CHFR-213ENST00000536843 GNG11P61952 73 aa17.93■□□□□ 0.46
CHFR-213ENST00000536843 ADALQ6DHV7 355 aa17.93■□□□□ 0.46
CHFR-213ENST00000536843 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
CHFR-213ENST00000536843 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 PTPN12Q05209 780 aaKnown RBP17.92■□□□□ 0.46
CHFR-213ENST00000536843 EFCAB13Q8IY85 973 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 FSD1Q9BTV5 496 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 RAB21Q9UL25 225 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 A0A087WZG4 1122 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 CLGNO14967 610 aa17.92■□□□□ 0.46
CHFR-213ENST00000536843 USPL1Q5W0Q7 1092 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms