RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CRKLP46109 303 aaKnown RBP9.36□□□□□ -0.91
YBX3-206ENST00000536823 CTDSPL2Q05D32 466 aa9.36□□□□□ -0.91
YBX3-206ENST00000536823 TEFQ10587 303 aa9.36□□□□□ -0.91
YBX3-206ENST00000536823 SLC39A6Q13433 755 aa9.36□□□□□ -0.91
YBX3-206ENST00000536823 PHACTR3Q96KR7 559 aa9.36□□□□□ -0.91
YBX3-206ENST00000536823 GPC1P35052 558 aa9.35□□□□□ -0.91
YBX3-206ENST00000536823 RALBP1Q15311 655 aa9.35□□□□□ -0.91
YBX3-206ENST00000536823 ZMYM1Q5SVZ6 1142 aa9.35□□□□□ -0.91
YBX3-206ENST00000536823 DNAJC10Q8IXB1 793 aa9.35□□□□□ -0.91
YBX3-206ENST00000536823 IL17REQ8NFR9 667 aa9.35□□□□□ -0.91
YBX3-206ENST00000536823 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
YBX3-206ENST00000536823 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
YBX3-206ENST00000536823 MEN1O00255 615 aa9.34□□□□□ -0.91
YBX3-206ENST00000536823 DDX10Q13206 875 aaKnown RBP9.34□□□□□ -0.91
YBX3-206ENST00000536823 SKIV2LQ15477 1246 aaKnown RBP9.34□□□□□ -0.91
YBX3-206ENST00000536823 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
YBX3-206ENST00000536823 C1orf229Q6ZS94 237 aaPredicted RBP9.34□□□□□ -0.91
YBX3-206ENST00000536823 KRTAP4-12Q9BQ66 201 aa9.34□□□□□ -0.91
YBX3-206ENST00000536823 SEMA6BQ9H3T3 888 aa9.34□□□□□ -0.91
YBX3-206ENST00000536823 SUV39H2Q9H5I1 410 aa9.34□□□□□ -0.91
YBX3-206ENST00000536823 CYLDQ9NQC7 956 aa9.34□□□□□ -0.91
YBX3-206ENST00000536823 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
YBX3-206ENST00000536823 SOS1Q07889 1333 aaPredicted RBP9.33□□□□□ -0.92
YBX3-206ENST00000536823 CHD4Q14839 1912 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 MMP10P09238 476 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 CYP19A1P11511 503 aaPredicted RBP9.33□□□□□ -0.92
YBX3-206ENST00000536823 RFC4P35249 363 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 POU4F2Q12837 409 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 INTS5Q6P9B9 1019 aaKnown RBP9.33□□□□□ -0.92
YBX3-206ENST00000536823 CD163Q86VB7 1156 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 EDARADDQ8WWZ3 215 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 CD2APQ9Y5K6 639 aa9.33□□□□□ -0.92
YBX3-206ENST00000536823 MYBBP1AQ9BQG0 1328 aaKnown RBP9.32□□□□□ -0.92
YBX3-206ENST00000536823 USP42Q9H9J4 1324 aaKnown RBP9.32□□□□□ -0.92
YBX3-206ENST00000536823 ATP5J2-PTCD1G3V325 749 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 GYS1P13807 737 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 YY1P25490 414 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 ZEB1P37275 1124 aaPredicted RBP9.32□□□□□ -0.92
YBX3-206ENST00000536823 ZNF790Q6PG37 636 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 NLGN1Q8N2Q7 840 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 LRRN4Q8WUT4 740 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 RTF1Q92541 710 aaKnown RBP9.32□□□□□ -0.92
YBX3-206ENST00000536823 ZNF496Q96IT1 587 aaPredicted RBP9.32□□□□□ -0.92
YBX3-206ENST00000536823 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
YBX3-206ENST00000536823 GDF2Q9UK05 429 aaPredicted RBP9.32□□□□□ -0.92
YBX3-206ENST00000536823 KIF13BQ9NQT8 1826 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 COL15A1P39059 1388 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
YBX3-206ENST00000536823 C10orf71Q711Q0 1435 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 DLG5Q8TDM6 1919 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 HTATSF1O43719 755 aaKnown RBP9.31□□□□□ -0.92
YBX3-206ENST00000536823 CLK2P49760 499 aaKnown RBP9.31□□□□□ -0.92
YBX3-206ENST00000536823 NR6A1Q15406 480 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 GPR162Q16538 588 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 MCM10Q7L590 875 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 DZIP3Q86Y13 1208 aaKnown RBP9.31□□□□□ -0.92
YBX3-206ENST00000536823 KLRG1Q96E93 195 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 PLEKHF1Q96S99 279 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 SRP68Q9UHB9 627 aaKnown RBP9.31□□□□□ -0.92
YBX3-206ENST00000536823 ZBTB1Q9Y2K1 713 aa9.31□□□□□ -0.92
YBX3-206ENST00000536823 PIK3R2O00459 728 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 STARD3NLO95772 234 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 NEFMP07197 916 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 AMPD1P23109 780 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 CHRNA4P43681 627 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 NFE2L2Q16236 605 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 LINC00114Q6XXX2 140 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 FMNL2Q96PY5 1086 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 CFHR5Q9BXR6 569 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 KIAA1551Q9HCM1 1747 aa9.3□□□□□ -0.92
YBX3-206ENST00000536823 PXDNLA1KZ92 1463 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 BTBD11A6QL63 1104 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 ESPNB1AK53 854 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 KCNQ3O43525 872 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.922e-6■■□□□ 11.5
YBX3-206ENST00000536823 DCTN1Q14203 1278 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 NBPF10Q6P3W6 841 aaKnown RBP9.29□□□□□ -0.92
YBX3-206ENST00000536823 NBPF15Q8N660 670 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 TEX13AQ9BXU3 409 aaPredicted RBP9.29□□□□□ -0.92
YBX3-206ENST00000536823 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
YBX3-206ENST00000536823 SCN7AQ01118 1682 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 MAPK8IP3Q9UPT6 1336 aa9.29□□□□□ -0.92
YBX3-206ENST00000536823 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
YBX3-206ENST00000536823 GNB5O14775 395 aa9.28□□□□□ -0.92
YBX3-206ENST00000536823 DDR1Q08345 913 aa9.28□□□□□ -0.92
YBX3-206ENST00000536823 DOC2BQ14184 412 aa9.28□□□□□ -0.92
YBX3-206ENST00000536823 GOLGA6L1Q8N7Z2 621 aa9.28□□□□□ -0.92
YBX3-206ENST00000536823 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
YBX3-206ENST00000536823 NARFQ9UHQ1 456 aa9.28□□□□□ -0.92
YBX3-206ENST00000536823 PARP3Q9Y6F1 533 aa9.28□□□□□ -0.92
YBX3-206ENST00000536823 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.92
YBX3-206ENST00000536823 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
YBX3-206ENST00000536823 GRIN3BO60391 1043 aa9.27□□□□□ -0.93
YBX3-206ENST00000536823 F11P03951 625 aa9.27□□□□□ -0.93
YBX3-206ENST00000536823 HOXB4P17483 251 aaPredicted RBP9.27□□□□□ -0.93
YBX3-206ENST00000536823 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.93
YBX3-206ENST00000536823 EIF5P55010 431 aaKnown RBP9.27□□□□□ -0.93
YBX3-206ENST00000536823 USPL1Q5W0Q7 1092 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms