RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 HELLSQ9NRZ9 838 aa25.09■■□□□ 1.61
TRIM3-214ENST00000536344 HMG20BQ9P0W2 317 aa25.09■■□□□ 1.61
TRIM3-214ENST00000536344 ATRNO75882 1429 aa25.08■■□□□ 1.61
TRIM3-214ENST00000536344 FGFR2P21802 821 aa25.08■■□□□ 1.61
TRIM3-214ENST00000536344 RASGRF1Q13972 1273 aa25.08■■□□□ 1.61
TRIM3-214ENST00000536344 WWC3Q9ULE0 1092 aa25.08■■□□□ 1.61
TRIM3-214ENST00000536344 PPFIA3O75145 1194 aa25.08■■□□□ 1.61
TRIM3-214ENST00000536344 CCDC186Q7Z3E2 898 aa25.08■■□□□ 1.61
TRIM3-214ENST00000536344 ONECUT3O60422 494 aaPredicted RBP25.07■■□□□ 1.6
TRIM3-214ENST00000536344 SLC5A1P13866 664 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 CDK11BP21127 795 aaKnown RBP25.07■■□□□ 1.6
TRIM3-214ENST00000536344 UBE2HP62256 183 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 ST3GAL1Q11201 340 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 TERF2Q15554 542 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 AKAP11Q9UKA4 1901 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 RPS6KB1P23443 525 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 GYG1P46976 350 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 GABPB1Q06547 395 aaPredicted RBP25.07■■□□□ 1.6
TRIM3-214ENST00000536344 TRAPPC3LQ5T215 181 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 TMEM87AQ8NBN3 555 aa25.07■■□□□ 1.6
TRIM3-214ENST00000536344 U3KPZ7 1027 aaPredicted RBP25.07■■□□□ 1.6
TRIM3-214ENST00000536344 TM6SF1Q9BZW5 370 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 TNNT1P13805 278 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 PSMA5P28066 241 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 RC3H1Q5TC82 1133 aaKnown RBP25.06■■□□□ 1.6
TRIM3-214ENST00000536344 ANKRD18AQ8IVF6 992 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 KIF18AQ8NI77 898 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.06■■□□□ 1.6
TRIM3-214ENST00000536344 NEK1Q96PY6 1258 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 NHSQ6T4R5 1651 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.06■■□□□ 1.6
TRIM3-214ENST00000536344 FOXP2O15409 715 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 TOB2Q14106 344 aaPredicted RBP25.06■■□□□ 1.6
TRIM3-214ENST00000536344 LUZP1Q86V48 1076 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 IPO4Q8TEX9 1081 aaKnown RBP25.06■■□□□ 1.6
TRIM3-214ENST00000536344 TRERF1Q96PN7 1200 aa25.06■■□□□ 1.6
TRIM3-214ENST00000536344 SBF2Q86WG5 1849 aa25.05■■□□□ 1.6
TRIM3-214ENST00000536344 KRT27Q7Z3Y8 459 aa25.05■■□□□ 1.6
TRIM3-214ENST00000536344 ZNF592Q92610 1267 aa25.05■■□□□ 1.6
TRIM3-214ENST00000536344 ZSCAN22P10073 491 aaPredicted RBP25.04■■□□□ 1.6
TRIM3-214ENST00000536344 SYT1P21579 422 aa25.04■■□□□ 1.6
TRIM3-214ENST00000536344 SPATA5Q8NB90 893 aa25.04■■□□□ 1.6
TRIM3-214ENST00000536344 CDC5LQ99459 802 aaKnown RBP25.04■■□□□ 1.6
TRIM3-214ENST00000536344 BCORQ6W2J9 1755 aa25.04■■□□□ 1.6
TRIM3-214ENST00000536344 GPAA1O43292 621 aa25.04■■□□□ 1.6
TRIM3-214ENST00000536344 KLRK1P26718 216 aa25.04■■□□□ 1.6
TRIM3-214ENST00000536344 DNM1Q05193 864 aaKnown RBP25.04■■□□□ 1.6
TRIM3-214ENST00000536344 CAMK4Q16566 473 aa25.04■■□□□ 1.6
TRIM3-214ENST00000536344 MORC2Q9Y6X9 1032 aaPredicted RBP25.04■■□□□ 1.6
TRIM3-214ENST00000536344 RFX7Q2KHR2 1363 aa25.03■■□□□ 1.6
TRIM3-214ENST00000536344 ZNF532Q9HCE3 1301 aa25.03■■□□□ 1.6
TRIM3-214ENST00000536344 Q6ZUG5 572 aa25.03■■□□□ 1.6
TRIM3-214ENST00000536344 SMC3Q9UQE7 1217 aa25.03■■□□□ 1.6
TRIM3-214ENST00000536344 APPP05067 770 aa25.02■■□□□ 1.6
TRIM3-214ENST00000536344 NLRP3Q96P20 1036 aa25.02■■□□□ 1.6
TRIM3-214ENST00000536344 JAG2Q9Y219 1238 aa25.02■■□□□ 1.6
TRIM3-214ENST00000536344 SMTNL1A8MU46 457 aa25.02■■□□□ 1.6
TRIM3-214ENST00000536344 GJB2P29033 226 aa25.02■■□□□ 1.6
TRIM3-214ENST00000536344 APPBP2Q92624 585 aa25.02■■□□□ 1.6
TRIM3-214ENST00000536344 FGAP02671 866 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 HSP90B1P14625 803 aaKnown RBP25.01■■□□□ 1.59
TRIM3-214ENST00000536344 NFIXQ14938 502 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 KMT5BQ4FZB7 885 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 MAGEB6Q8N7X4 407 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 GPHNQ9NQX3 736 aaPredicted RBP25.01■■□□□ 1.59
TRIM3-214ENST00000536344 DENND2AQ9ULE3 1009 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 STX6O43752 255 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 ARID4AP29374 1257 aaPredicted RBP25.01■■□□□ 1.59
TRIM3-214ENST00000536344 TPTE2Q6XPS3 522 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 BRF1Q92994 677 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 MINPP1Q9UNW1 487 aa25.01■■□□□ 1.59
TRIM3-214ENST00000536344 CICQ96RK0 1608 aaPredicted RBP25■■□□□ 1.59
TRIM3-214ENST00000536344 PDE6AP16499 860 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 ADD2P35612 726 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 DRC7Q8IY82 874 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 STK11IPQ8N1F8 1099 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 DSCC1Q9BVC3 393 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 ABCF2Q9UG63 623 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 GOLGA6L6A8MZA4 724 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 E7EWF7 191 aa25■■□□□ 1.59
TRIM3-214ENST00000536344 SF3B3Q15393 1217 aaKnown RBP24.99■■□□□ 1.59
TRIM3-214ENST00000536344 CCDC112Q8NEF3 446 aa24.99■■□□□ 1.59
TRIM3-214ENST00000536344 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.99■■□□□ 1.59
TRIM3-214ENST00000536344 TFCP2L1Q9NZI6 479 aa24.99■■□□□ 1.59
TRIM3-214ENST00000536344 F13A1P00488 732 aa24.99■■□□□ 1.59
TRIM3-214ENST00000536344 TAF1LQ8IZX4 1826 aa24.99■■□□□ 1.59
TRIM3-214ENST00000536344 CAPN2P17655 700 aa24.99■■□□□ 1.59
TRIM3-214ENST00000536344 UQCRFS1P1P0C7P4 283 aa24.98■■□□□ 1.59
TRIM3-214ENST00000536344 MIGA1Q8NAN2 632 aa24.98■■□□□ 1.59
TRIM3-214ENST00000536344 BRWD3Q6RI45 1802 aa24.98■■□□□ 1.59
TRIM3-214ENST00000536344 ZFYP08048 801 aaPredicted RBP24.98■■□□□ 1.59
TRIM3-214ENST00000536344 TSGA10IPQ3SY00 556 aa24.98■■□□□ 1.59
TRIM3-214ENST00000536344 RAB11FIP4Q86YS3 637 aa24.98■■□□□ 1.59
TRIM3-214ENST00000536344 INCENPQ9NQS7 918 aa24.98■■□□□ 1.59
TRIM3-214ENST00000536344 C4BP0C0L5 1744 aa24.97■■□□□ 1.59
TRIM3-214ENST00000536344 TPM3P06753 285 aa24.97■■□□□ 1.59
TRIM3-214ENST00000536344 RPS8P62241 208 aaKnown RBP24.97■■□□□ 1.59
TRIM3-214ENST00000536344 CKAP2LQ8IYA6 745 aa24.97■■□□□ 1.59
TRIM3-214ENST00000536344 NKX2-3Q8TAU0 364 aa24.97■■□□□ 1.59
TRIM3-214ENST00000536344 NYXQ9GZU5 481 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms