RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 SPDYE2BA6NHP3 402 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 UQCRFS1P1P0C7P4 283 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SPDYE6P0CI01 402 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 TTC39AQ5SRH9 613 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SERPINA10Q9UK55 444 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SCAF8Q9UPN6 1271 aaKnown RBP13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SUGT1Q9Y2Z0 365 aa13.89□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ADM5C9JUS6 153 aa13.88□□□□□ -0.19
TNFRSF1A-208ENST00000536194 HSPA6P17066 643 aa13.88□□□□□ -0.19
TNFRSF1A-208ENST00000536194 CRKP46108 304 aa13.88□□□□□ -0.19
TNFRSF1A-208ENST00000536194 DLGAP5Q15398 846 aa13.88□□□□□ -0.19
TNFRSF1A-208ENST00000536194 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SNRKQ9NRH2 765 aa13.88□□□□□ -0.19
TNFRSF1A-208ENST00000536194 NDUFB9Q9Y6M9 179 aa13.88□□□□□ -0.19
TNFRSF1A-208ENST00000536194 IGHDP01880 384 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 LDHBP07195 334 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ZAP70P43403 619 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 HTRA3P83110 453 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 KRT26Q7Z3Y9 468 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 DCPSQ96C86 337 aaKnown RBP13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ABCF2Q9UG63 623 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 MAST3O60307 1309 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 PITPNM2Q9BZ72 1349 aa13.87□□□□□ -0.19
TNFRSF1A-208ENST00000536194 CLRN2A0PK11 232 aa13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 CYP2E1P05181 493 aaPredicted RBP13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 APLP1P51693 650 aa13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 RBM5P52756 815 aaKnown RBP eCLIP13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 HDLBPQ00341 1268 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 CDC37L1Q7L3B6 337 aa13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 TEKT1Q969V4 418 aa13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ZDHHC15Q96MV8 337 aa13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 MRIQ9BWK5 157 aa13.86□□□□□ -0.19
TNFRSF1A-208ENST00000536194 CST9Q5W186 159 aa13.85□□□□□ -0.19
TNFRSF1A-208ENST00000536194 APOBEC3HQ6NTF7 200 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-208ENST00000536194 HHIPL2Q6UWX4 724 aa13.85□□□□□ -0.19
TNFRSF1A-208ENST00000536194 TDRD3Q9H7E2 651 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-208ENST00000536194 PIH1D3Q9NQM4 214 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-208ENST00000536194 DAGLAQ9Y4D2 1042 aa13.85□□□□□ -0.19
TNFRSF1A-208ENST00000536194 CDK5RAP2Q96SN8 1893 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 MECOMQ03112 1051 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SULF1Q8IWU6 871 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 SMC5Q8IY18 1101 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ANTXR1Q9H6X2 564 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 ZNF70Q9UC06 446 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 GAKO14976 1311 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 MYH7P12883 1935 aa13.84□□□□□ -0.19
TNFRSF1A-208ENST00000536194 PRAMEF18Q5VWM3 479 aa13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 SPTY2D1Q68D10 685 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 ERICH6Q7L0X2 663 aa13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 NSUN4Q96CB9 384 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 GCC1Q96CN9 775 aa13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 EDC3Q96F86 508 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 RWDD1Q9H446 243 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1A-208ENST00000536194 MYO1BO43795 1136 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 ATP5JP18859 108 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 CACNB3P54284 484 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 ANKRD45Q5TZF3 282 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 TSHZ3Q63HK5 1081 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 APOBEC3FQ8IUX4 373 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 ZNF408Q9H9D4 720 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 VEZTQ9HBM0 779 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 LRP2BPQ9P2M1 347 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 FOCADQ5VW36 1801 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 SSC5DA1L4H1 1573 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 SALL3Q9BXA9 1300 aa13.82□□□□□ -0.2
TNFRSF1A-208ENST00000536194 TMEM88BA6NKF7 163 aa13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 CELF2O95319 508 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 CDC42EP5Q6NZY7 148 aa13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 FAM163AQ96GL9 167 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 BOLA2Q9H3K6 86 aa13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 RAI14Q9P0K7 980 aa13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 MROH7-TTC4A0A0A0MT08 1334 aa13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 CNTNAP1P78357 1384 aa13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 PAPPA2Q9BXP8 1791 aa13.81□□□□□ -0.2
TNFRSF1A-208ENST00000536194 TCP10L2B9ZVM9 353 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 ADGRA1Q86SQ6 560 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 CDAN1Q8IWY9 1227 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 HAUS7Q99871 368 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 RFX7Q2KHR2 1363 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 OTOFQ9HC10 1997 aa13.8□□□□□ -0.2
TNFRSF1A-208ENST00000536194 GPR75-ASB3A0A0A6YYF3 556 aa13.79□□□□□ -0.2
TNFRSF1A-208ENST00000536194 GOLIM4O00461 696 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms