RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.58■■□□□ 1.05
CACNB3-202ENST00000536187 FOXP2O15409 715 aa21.58■■□□□ 1.04
CACNB3-202ENST00000536187 LDHBP07195 334 aaKnown RBP21.58■■□□□ 1.04
CACNB3-202ENST00000536187 UBE3CQ15386 1083 aa21.58■■□□□ 1.04
CACNB3-202ENST00000536187 CASC1Q6TDU7 716 aa21.58■■□□□ 1.04
CACNB3-202ENST00000536187 NIM1KQ8IY84 436 aa21.58■■□□□ 1.04
CACNB3-202ENST00000536187 APPBP2Q92624 585 aa21.58■■□□□ 1.04
CACNB3-202ENST00000536187 MYH2Q9UKX2 1941 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 USP17L3A6NCW0 530 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 USP17L4A6NCW7 530 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 HIP1O00291 1037 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 PSMD14O00487 310 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 CYP7A1P22680 504 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 STRIP1Q5VSL9 837 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 USP17L1Q7RTZ2 530 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 ZNRF3Q9ULT6 936 aa21.57■■□□□ 1.04
CACNB3-202ENST00000536187 ZFYP08048 801 aaPredicted RBP21.56■■□□□ 1.04
CACNB3-202ENST00000536187 CXCL9Q07325 125 aa21.56■■□□□ 1.04
CACNB3-202ENST00000536187 MCMDC2Q4G0Z9 681 aa21.56■■□□□ 1.04
CACNB3-202ENST00000536187 LSG1Q9H089 658 aaKnown RBP21.56■■□□□ 1.04
CACNB3-202ENST00000536187 VPS33BQ9H267 617 aa21.56■■□□□ 1.04
CACNB3-202ENST00000536187 ANO2Q9NQ90 1003 aa21.56■■□□□ 1.04
CACNB3-202ENST00000536187 ZBTB12Q9Y330 459 aaPredicted RBP21.56■■□□□ 1.04
CACNB3-202ENST00000536187 PCDHAC2Q9Y5I4 1007 aa21.56■■□□□ 1.04
CACNB3-202ENST00000536187 DYNLL1P63167 89 aaKnown RBP21.56■■□□□ 1.04
CACNB3-202ENST00000536187 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
CACNB3-202ENST00000536187 KIAA0825Q8IV33 1275 aa21.56■■□□□ 1.04
CACNB3-202ENST00000536187 DICER1Q9UPY3 1922 aaKnown RBP21.56■■□□□ 1.04
CACNB3-202ENST00000536187 SCNN1DP51172 638 aa21.55■■□□□ 1.04
CACNB3-202ENST00000536187 DZIP1Q86YF9 867 aaKnown RBP21.55■■□□□ 1.04
CACNB3-202ENST00000536187 LCORLQ8N3X6 602 aa21.55■■□□□ 1.04
CACNB3-202ENST00000536187 TBC1D22AQ8WUA7 517 aa21.55■■□□□ 1.04
CACNB3-202ENST00000536187 HELLSQ9NRZ9 838 aa21.55■■□□□ 1.04
CACNB3-202ENST00000536187 GPAA1O43292 621 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 ZSCAN25Q6NSZ9 544 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 ZGPATQ8N5A5 531 aaKnown RBP21.54■■□□□ 1.04
CACNB3-202ENST00000536187 USP26Q9BXU7 913 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 ARMT1Q9H993 441 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 CCDC171Q6TFL3 1326 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 ZNF541Q9H0D2 1346 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 MBD4O95243 580 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 GPR162Q16538 588 aa21.54■■□□□ 1.04
CACNB3-202ENST00000536187 RAD50Q92878 1312 aa21.53■■□□□ 1.04
CACNB3-202ENST00000536187 TIAM2Q8IVF5 1701 aa21.53■■□□□ 1.04
CACNB3-202ENST00000536187 SHTN1A0MZ66 631 aa21.53■■□□□ 1.04
CACNB3-202ENST00000536187 RUFY2Q8WXA3 655 aa21.53■■□□□ 1.04
CACNB3-202ENST00000536187 JDP2Q8WYK2 163 aa21.53■■□□□ 1.04
CACNB3-202ENST00000536187 RIOK1Q9BRS2 568 aaKnown RBP21.53■■□□□ 1.04
CACNB3-202ENST00000536187 TTF2Q9UNY4 1162 aaKnown RBP21.53■■□□□ 1.04
CACNB3-202ENST00000536187 PRKAB2O43741 272 aa21.52■■□□□ 1.04
CACNB3-202ENST00000536187 VIL1P09327 827 aaKnown RBP21.52■■□□□ 1.04
CACNB3-202ENST00000536187 LMNB1P20700 586 aa21.52■■□□□ 1.04
CACNB3-202ENST00000536187 SPTY2D1Q68D10 685 aaPredicted RBP21.52■■□□□ 1.04
CACNB3-202ENST00000536187 AATFQ9NY61 560 aaKnown RBP eCLIP21.52■■□□□ 1.04
CACNB3-202ENST00000536187 FZD9O00144 591 aa21.52■■□□□ 1.03
CACNB3-202ENST00000536187 GMLQ99445 158 aa21.52■■□□□ 1.03
CACNB3-202ENST00000536187 RSBN1LQ6PCB5 846 aaPredicted RBP21.51■■□□□ 1.03
CACNB3-202ENST00000536187 TICAM2Q86XR7 235 aa21.51■■□□□ 1.03
CACNB3-202ENST00000536187 STRBPQ96SI9 672 aaKnown RBP21.51■■□□□ 1.03
CACNB3-202ENST00000536187 MROH7-TTC4A0A0A0MT08 1334 aa21.5■■□□□ 1.03
CACNB3-202ENST00000536187 LRRFIP1Q32MZ4 808 aaKnown RBP21.5■■□□□ 1.03
CACNB3-202ENST00000536187 PALD1Q9ULE6 856 aa21.5■■□□□ 1.03
CACNB3-202ENST00000536187 DAGLAQ9Y4D2 1042 aa21.5■■□□□ 1.03
CACNB3-202ENST00000536187 TAF6LQ9Y6J9 622 aa21.5■■□□□ 1.03
CACNB3-202ENST00000536187 HSPD1P10809 573 aaKnown RBP21.49■■□□□ 1.03
CACNB3-202ENST00000536187 AIDAQ96BJ3 306 aa21.49■■□□□ 1.03
CACNB3-202ENST00000536187 RNF181Q9P0P0 153 aa21.49■■□□□ 1.03
CACNB3-202ENST00000536187 CDK5RAP2Q96SN8 1893 aa21.49■■□□□ 1.03
CACNB3-202ENST00000536187 REC8O95072 547 aa21.49■■□□□ 1.03
CACNB3-202ENST00000536187 FKBP1AP62942 108 aaKnown RBP21.49■■□□□ 1.03
CACNB3-202ENST00000536187 CIAPIN1Q6FI81 312 aa21.49■■□□□ 1.03
CACNB3-202ENST00000536187 EPB41L4AQ9HCS5 686 aaPredicted RBP21.49■■□□□ 1.03
CACNB3-202ENST00000536187 GAKO14976 1311 aa21.48■■□□□ 1.03
CACNB3-202ENST00000536187 MAGEB6P1A0A0J9YX57 407 aa21.48■■□□□ 1.03
CACNB3-202ENST00000536187 SDR42E1Q8WUS8 393 aa21.48■■□□□ 1.03
CACNB3-202ENST00000536187 C9orf131Q5VYM1 1079 aa21.47■■□□□ 1.03
CACNB3-202ENST00000536187 SH3RF3Q8TEJ3 882 aaPredicted RBP21.47■■□□□ 1.03
CACNB3-202ENST00000536187 MAP4K1Q92918 833 aa21.47■■□□□ 1.03
CACNB3-202ENST00000536187 TBC1D32Q96NH3 1257 aa21.47■■□□□ 1.03
CACNB3-202ENST00000536187 C22orf23Q9BZE7 217 aa21.47■■□□□ 1.03
CACNB3-202ENST00000536187 SUGT1Q9Y2Z0 365 aa21.47■■□□□ 1.03
CACNB3-202ENST00000536187 SMIM22K7EJ46 135 aa21.47■■□□□ 1.03
CACNB3-202ENST00000536187 BTDP43251 543 aa21.47■■□□□ 1.03
CACNB3-202ENST00000536187 RBM8AQ9Y5S9 174 aaKnown RBP21.47■■□□□ 1.03
CACNB3-202ENST00000536187 BAZ2AQ9UIF9 1905 aaKnown RBP21.46■■□□□ 1.03
CACNB3-202ENST00000536187 CRKP46108 304 aa21.46■■□□□ 1.03
CACNB3-202ENST00000536187 EVX2Q03828 476 aa21.46■■□□□ 1.03
CACNB3-202ENST00000536187 COL9A3Q14050 684 aaPredicted RBP21.46■■□□□ 1.03
CACNB3-202ENST00000536187 GJA3Q9Y6H8 435 aa21.46■■□□□ 1.03
CACNB3-202ENST00000536187 GSG1L2A8MUP6 293 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 APOBEC3HQ6NTF7 200 aaKnown RBP21.45■■□□□ 1.02
CACNB3-202ENST00000536187 KIAA1211Q6ZU35 1233 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 RASEFQ8IZ41 740 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 KIF2CQ99661 725 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 GPR75-ASB3A0A0A6YYF3 556 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 EGFRP00533 1210 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 RHBDL3P58872 404 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 GSTO1P78417 241 aa21.45■■□□□ 1.02
CACNB3-202ENST00000536187 FAM163AQ96GL9 167 aaPredicted RBP21.45■■□□□ 1.02
CACNB3-202ENST00000536187 SLC4A4Q9Y6R1 1079 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms