RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 PDE8BO95263 885 aa15.68■□□□□ 0.1
DDB1-207ENST00000535967 HELBQ8NG08 1087 aaPredicted RBP15.68■□□□□ 0.1
DDB1-207ENST00000535967 AKAP11Q9UKA4 1901 aa15.68■□□□□ 0.1
DDB1-207ENST00000535967 IRS2Q9Y4H2 1338 aa15.68■□□□□ 0.1
DDB1-207ENST00000535967 PUM3Q15397 648 aaKnown RBP15.68■□□□□ 0.1
DDB1-207ENST00000535967 GBA2Q9HCG7 927 aaPredicted RBP15.68■□□□□ 0.1
DDB1-207ENST00000535967 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
DDB1-207ENST00000535967 ZNF609O15014 1411 aa15.67■□□□□ 0.1
DDB1-207ENST00000535967 CENPBP07199 599 aaPredicted RBP15.67■□□□□ 0.1
DDB1-207ENST00000535967 RGMBQ6NW40 437 aa15.67■□□□□ 0.1
DDB1-207ENST00000535967 CEP126Q9P2H0 1117 aa15.67■□□□□ 0.1
DDB1-207ENST00000535967 G3V3G9 751 aa15.66■□□□□ 0.1
DDB1-207ENST00000535967 KIF23Q02241 960 aaPredicted RBP15.66■□□□□ 0.1
DDB1-207ENST00000535967 G3BP1Q13283 466 aaKnown RBP eCLIP15.66■□□□□ 0.12e-9■■□□□ 11.9
DDB1-207ENST00000535967 HSP90AB4PQ58FF6 505 aa15.66■□□□□ 0.1
DDB1-207ENST00000535967 COA1Q9GZY4 146 aa15.66■□□□□ 0.1
DDB1-207ENST00000535967 GGA3Q9NZ52 723 aa15.66■□□□□ 0.1
DDB1-207ENST00000535967 SURF6O75683 361 aaKnown RBP15.65■□□□□ 0.1
DDB1-207ENST00000535967 FGFR2P21802 821 aa15.65■□□□□ 0.1
DDB1-207ENST00000535967 KIF4BQ2VIQ3 1234 aa15.65■□□□□ 0.1
DDB1-207ENST00000535967 ZNF804AQ7Z570 1209 aa15.65■□□□□ 0.1
DDB1-207ENST00000535967 PODNQ7Z5L7 613 aa15.65■□□□□ 0.1
DDB1-207ENST00000535967 WTIPA6NIX2 430 aaPredicted RBP15.64■□□□□ 0.09
DDB1-207ENST00000535967 IFIT1P09914 478 aaKnown RBP15.64■□□□□ 0.09
DDB1-207ENST00000535967 SLC5A1P13866 664 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 RPS12P25398 132 aaKnown RBP15.64■□□□□ 0.09
DDB1-207ENST00000535967 KLRK1P26718 216 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 OS9Q13438 667 aaPredicted RBP15.64■□□□□ 0.09
DDB1-207ENST00000535967 ATP2B3Q16720 1220 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 ERC1Q8IUD2 1116 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 SIRT2Q8IXJ6 389 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 LPIN2Q92539 896 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 DCPSQ96C86 337 aaKnown RBP15.64■□□□□ 0.09
DDB1-207ENST00000535967 AKAP2Q9Y2D5 859 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 ECM29Q5VYK3 1845 aa15.64■□□□□ 0.09
DDB1-207ENST00000535967 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.63■□□□□ 0.09
DDB1-207ENST00000535967 SNAP23O00161 211 aa15.63■□□□□ 0.09
DDB1-207ENST00000535967 TRPA1O75762 1119 aa15.63■□□□□ 0.09
DDB1-207ENST00000535967 VIL1P09327 827 aaKnown RBP15.63■□□□□ 0.09
DDB1-207ENST00000535967 ZNF157P51786 506 aaPredicted RBP15.63■□□□□ 0.09
DDB1-207ENST00000535967 TXNRD3Q86VQ6 643 aa15.63■□□□□ 0.09
DDB1-207ENST00000535967 C2orf69Q8N8R5 385 aa15.63■□□□□ 0.09
DDB1-207ENST00000535967 ZFP91Q96JP5 570 aaPredicted RBP15.63■□□□□ 0.09
DDB1-207ENST00000535967 GPR108Q9NPR9 543 aa15.63■□□□□ 0.09
DDB1-207ENST00000535967 RNF186Q9NXI6 227 aa15.63■□□□□ 0.09
DDB1-207ENST00000535967 SOX10P56693 466 aa15.62■□□□□ 0.09
DDB1-207ENST00000535967 TFCP2Q12800 502 aa15.62■□□□□ 0.09
DDB1-207ENST00000535967 CAVIN4Q5BKX8 364 aa15.62■□□□□ 0.09
DDB1-207ENST00000535967 CDCA5Q96FF9 252 aa15.62■□□□□ 0.09
DDB1-207ENST00000535967 SCAF8Q9UPN6 1271 aaKnown RBP15.62■□□□□ 0.09
DDB1-207ENST00000535967 SASH1O94885 1247 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 SLC10A3P09131 477 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 PSEN1P49768 467 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 PDAP1Q13442 181 aaKnown RBP15.61■□□□□ 0.09
DDB1-207ENST00000535967 CCDC102AQ96A19 550 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 CSRNP1Q96S65 589 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 CD209Q9NNX6 404 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 SAGE1Q9NXZ1 904 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 EXOC6BQ9Y2D4 811 aa15.61■□□□□ 0.09
DDB1-207ENST00000535967 MAST2Q6P0Q8 1798 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 RAB11FIP3O75154 756 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 IL1R1P14778 569 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 HIBADHP31937 336 aaKnown RBP15.6■□□□□ 0.09
DDB1-207ENST00000535967 CLCN6P51797 869 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 ANGEL2Q5VTE6 544 aaKnown RBP15.6■□□□□ 0.09
DDB1-207ENST00000535967 SULF1Q8IWU6 871 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 EXOC6Q8TAG9 804 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 PCDHB15Q9Y5E8 787 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 A0A1B0GUL7 405 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 GYG1P46976 350 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 ZNF280AP59817 542 aaPredicted RBP15.6■□□□□ 0.09
DDB1-207ENST00000535967 MOB2Q70IA6 237 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 VPS37DQ86XT2 251 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 RASAL3Q86YV0 1011 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 KIF1BPQ96EK5 621 aa15.6■□□□□ 0.09
DDB1-207ENST00000535967 FAM84BQ96KN1 310 aaPredicted RBP15.6■□□□□ 0.09
DDB1-207ENST00000535967 MYO3BQ8WXR4 1341 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 USP17L3A6NCW0 530 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 USP17L4A6NCW7 530 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 SCARF1Q14162 830 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 STRIP1Q5VSL9 837 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 USP17L1Q7RTZ2 530 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 FBXO33Q7Z6M2 555 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 GMLQ99445 158 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 PAPPA2Q9BXP8 1791 aa15.59■□□□□ 0.09
DDB1-207ENST00000535967 DOCK2Q92608 1830 aa15.58■□□□□ 0.09
DDB1-207ENST00000535967 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
DDB1-207ENST00000535967 TNNI3KQ59H18 835 aa15.58■□□□□ 0.08
DDB1-207ENST00000535967 RSBN1LQ6PCB5 846 aaPredicted RBP15.58■□□□□ 0.08
DDB1-207ENST00000535967 TDRD7Q8NHU6 1098 aaKnown RBP15.58■□□□□ 0.08
DDB1-207ENST00000535967 RHPN1Q8TCX5 695 aa15.58■□□□□ 0.08
DDB1-207ENST00000535967 FPGT-TNNI3KV9GXZ4 949 aa15.58■□□□□ 0.08
DDB1-207ENST00000535967 SEMA3EO15041 775 aa15.57■□□□□ 0.08
DDB1-207ENST00000535967 FKBP1AP62942 108 aaKnown RBP15.57■□□□□ 0.08
DDB1-207ENST00000535967 PRAMEF18Q5VWM3 479 aa15.57■□□□□ 0.08
DDB1-207ENST00000535967 DCTPP1Q9H773 170 aa15.57■□□□□ 0.08
DDB1-207ENST00000535967 GNL3LQ9NVN8 582 aaKnown RBP15.57■□□□□ 0.08
DDB1-207ENST00000535967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.57■□□□□ 0.08
DDB1-207ENST00000535967 FAM205AQ6ZU69 1335 aa15.57■□□□□ 0.08
DDB1-207ENST00000535967 COL1A1P02452 1464 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms