RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 DISP2A7MBM2 1401 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 ATRNO75882 1429 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 WDR19Q8NEZ3 1342 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 ZNF532Q9HCE3 1301 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 EXOC5O00471 708 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 SF3A1Q15459 793 aaKnown RBP15.35■□□□□ 0.05
LDLR-203ENST00000535915 C11orf57Q6ZUT1 292 aaPredicted RBP15.35■□□□□ 0.05
LDLR-203ENST00000535915 FBXO18Q8NFZ0 1043 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 PRIMPOLQ96LW4 560 aa15.35■□□□□ 0.05
LDLR-203ENST00000535915 STK38Q15208 465 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 UBE3CQ15386 1083 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.34■□□□□ 0.05
LDLR-203ENST00000535915 HELBQ8NG08 1087 aaPredicted RBP15.34■□□□□ 0.05
LDLR-203ENST00000535915 MRPS27Q92552 414 aaKnown RBP15.34■□□□□ 0.05
LDLR-203ENST00000535915 NBPF3Q9H094 633 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 UBN2Q6ZU65 1347 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 ERVV-1B6SEH8 477 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 IQCB1Q15051 598 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 ADALQ6DHV7 355 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 MYRIPQ8NFW9 859 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 GJB4Q9NTQ9 266 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 NRBP1Q9UHY1 535 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 CLIC4Q9Y696 253 aa15.34■□□□□ 0.05
LDLR-203ENST00000535915 ARAP2Q8WZ64 1704 aa15.33■□□□□ 0.05
LDLR-203ENST00000535915 UQCRFS1P1P0C7P4 283 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 ARID4AP29374 1257 aaPredicted RBP15.33■□□□□ 0.04
LDLR-203ENST00000535915 IL6STP40189 918 aaPredicted RBP15.33■□□□□ 0.04
LDLR-203ENST00000535915 PUM3Q15397 648 aaKnown RBP15.33■□□□□ 0.04
LDLR-203ENST00000535915 TBC1D10CQ8IV04 446 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 LINC00301Q8NCQ3 95 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 ANGEL1Q9UNK9 670 aaKnown RBP15.33■□□□□ 0.04
LDLR-203ENST00000535915 DOT1LQ8TEK3 1739 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 A0A1B0GVL5 298 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 PDE6AP16499 860 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 CLIP2Q9UDT6 1046 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 WWC3Q9ULE0 1092 aa15.33■□□□□ 0.04
LDLR-203ENST00000535915 CYB5R4Q7L1T6 521 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 BRAPQ7Z569 592 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 LPIN2Q92539 896 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 ANO10Q9NW15 660 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 MROH5Q6ZUA9 1318 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 PLCH1Q4KWH8 1693 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 A0A087WWV3 80 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 BECN2A8MW95 431 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 SYNE3Q6ZMZ3 975 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 ZNF34Q8IZ26 560 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 FMR1NBQ8N0W7 255 aaPredicted RBP15.32■□□□□ 0.04
LDLR-203ENST00000535915 KCNG4Q8TDN1 519 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 ERCC4Q92889 916 aaPredicted RBP15.32■□□□□ 0.04
LDLR-203ENST00000535915 SDF4Q9BRK5 362 aa15.32■□□□□ 0.04
LDLR-203ENST00000535915 FAM177BA6PVY3 158 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 METAP2P50579 478 aaKnown RBP eCLIP15.31■□□□□ 0.045e-7■□□□□ 8.9
LDLR-203ENST00000535915 LRMPQ12912 555 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 ECM29Q5VYK3 1845 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 WNK3Q9BYP7 1800 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 ZMYM6O95789 1325 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 A0A0G2JS52 829 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 A0A1W2PQ27 194 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 A0A1W2PQ64 194 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 A0A1W2PQD8 194 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 B4E1Z4 1266 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 RXRAP19793 462 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 NDUFA8P51970 172 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
LDLR-203ENST00000535915 KIF28PB7ZC32 967 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 SPTLC2O15270 562 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 YEATS4O95619 227 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 FBXW7Q969H0 707 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 MAP7D2Q96T17 732 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 TCRBV5S4A2TA0A5A2 114 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 SH2B2O14492 632 aaPredicted RBP15.3■□□□□ 0.04
LDLR-203ENST00000535915 SLC5A1P13866 664 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 FGFR2P21802 821 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 KIF23Q02241 960 aaPredicted RBP15.3■□□□□ 0.04
LDLR-203ENST00000535915 SPATA5Q8NB90 893 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 STRBPQ96SI9 672 aaKnown RBP15.3■□□□□ 0.04
LDLR-203ENST00000535915 SLIT2O94813 1529 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 LRP5O75197 1615 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 SARM1Q6SZW1 724 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 CEP57L1Q8IYX8 460 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 MPHOSPH8Q99549 860 aa15.3■□□□□ 0.04
LDLR-203ENST00000535915 CDKL5O76039 1030 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 CDC25BP30305 580 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 CHAF1AQ13111 956 aaPredicted RBP15.29■□□□□ 0.04
LDLR-203ENST00000535915 APOA5Q6Q788 366 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 NFXL1Q6ZNB6 911 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 MICU3Q86XE3 530 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 ALG1Q9BT22 464 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 NEDD4P46934 1319 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 SNAP23O00161 211 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 MAP3K12Q12852 859 aa15.29■□□□□ 0.04
LDLR-203ENST00000535915 ZRSR1Q15695 479 aaKnown RBP15.29■□□□□ 0.04
LDLR-203ENST00000535915 SUSD4Q5VX71 490 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms