RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CTSWP56202 376 aa10.77□□□□□ -0.69
CLIP1-206ENST00000535290 CCDC191Q8NCU4 936 aa10.77□□□□□ -0.69
CLIP1-206ENST00000535290 TTLL11Q8NHH1 800 aa10.77□□□□□ -0.69
CLIP1-206ENST00000535290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLIP1-206ENST00000535290 CD209Q9NNX6 404 aa10.77□□□□□ -0.69
CLIP1-206ENST00000535290 ZMYND8Q9ULU4 1186 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-206ENST00000535290 MYPNQ86TC9 1320 aa10.77□□□□□ -0.69
CLIP1-206ENST00000535290 CLSPNQ9HAW4 1339 aa10.77□□□□□ -0.69
CLIP1-206ENST00000535290 SPDYE5A6NIY4 337 aa10.76□□□□□ -0.69
CLIP1-206ENST00000535290 HOXD10P28358 340 aa10.76□□□□□ -0.69
CLIP1-206ENST00000535290 RBM5P52756 815 aaKnown RBP eCLIP10.76□□□□□ -0.69
CLIP1-206ENST00000535290 UBXN2AP68543 259 aa10.76□□□□□ -0.69
CLIP1-206ENST00000535290 PRKCZQ05513 592 aa10.76□□□□□ -0.69
CLIP1-206ENST00000535290 HELBQ8NG08 1087 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-206ENST00000535290 ZCCHC17Q9NP64 241 aaKnown RBP10.76□□□□□ -0.69
CLIP1-206ENST00000535290 CWC25Q9NXE8 425 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-206ENST00000535290 ZNF70Q9UC06 446 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-206ENST00000535290 JAG2Q9Y219 1238 aa10.76□□□□□ -0.69
CLIP1-206ENST00000535290 CSADQ9Y600 493 aa10.76□□□□□ -0.69
CLIP1-206ENST00000535290 SNAP23O00161 211 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 IRF6O14896 467 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 TFRCP02786 760 aaKnown RBP10.75□□□□□ -0.69
CLIP1-206ENST00000535290 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 C7orf61Q8IZ16 206 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 PAWRQ96IZ0 340 aaKnown RBP10.75□□□□□ -0.69
CLIP1-206ENST00000535290 DEFB118Q96PH6 123 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 PCGF6Q9BYE7 350 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 TMEM39BQ9GZU3 492 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 PHAXQ9H814 394 aaKnown RBP10.75□□□□□ -0.69
CLIP1-206ENST00000535290 SNCAIPQ9Y6H5 919 aa10.75□□□□□ -0.69
CLIP1-206ENST00000535290 HOXB7P09629 217 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 MAGEA10P43363 369 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-206ENST00000535290 SNAPC2Q13487 334 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 TNFAIP1Q13829 316 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 ERO1BQ86YB8 467 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 TDHQ8IZJ6 230 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 DIS3LQ8TF46 1054 aaKnown RBP10.74□□□□□ -0.69
CLIP1-206ENST00000535290 GUCD1Q96NT3 240 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 TDRD3Q9H7E2 651 aaKnown RBP10.74□□□□□ -0.69
CLIP1-206ENST00000535290 GABRQQ9UN88 632 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 LAS1LQ9Y4W2 734 aaKnown RBP10.74□□□□□ -0.69
CLIP1-206ENST00000535290 RPTORQ8N122 1335 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 ADGRA2Q96PE1 1338 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 IRS2Q9Y4H2 1338 aa10.74□□□□□ -0.69
CLIP1-206ENST00000535290 TCP10L2B9ZVM9 353 aa10.73□□□□□ -0.69
CLIP1-206ENST00000535290 ELNP15502 786 aa10.73□□□□□ -0.69
CLIP1-206ENST00000535290 SYN1P17600 705 aa10.73□□□□□ -0.69
CLIP1-206ENST00000535290 TMPOP42166 694 aaKnown RBP10.73□□□□□ -0.69
CLIP1-206ENST00000535290 DUSP27Q5VZP5 1158 aa10.73□□□□□ -0.69
CLIP1-206ENST00000535290 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
CLIP1-206ENST00000535290 ZKSCAN4Q969J2 545 aaPredicted RBP10.73□□□□□ -0.69
CLIP1-206ENST00000535290 ANKRD2Q9GZV1 360 aa10.73□□□□□ -0.69
CLIP1-206ENST00000535290 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
CLIP1-206ENST00000535290 OTOFQ9HC10 1997 aa10.73□□□□□ -0.69
CLIP1-206ENST00000535290 PDHXO00330 501 aa10.72□□□□□ -0.69
CLIP1-206ENST00000535290 ADCY3O60266 1144 aa10.72□□□□□ -0.69
CLIP1-206ENST00000535290 INHAP05111 366 aa10.72□□□□□ -0.69
CLIP1-206ENST00000535290 COL9A1P20849 921 aa10.72□□□□□ -0.69
CLIP1-206ENST00000535290 IGHMBP2P38935 993 aaKnown RBP10.72□□□□□ -0.69
CLIP1-206ENST00000535290 KCNJ4P48050 445 aa10.72□□□□□ -0.69
CLIP1-206ENST00000535290 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-206ENST00000535290 METTL22Q9BUU2 404 aaPredicted RBP10.72□□□□□ -0.69
CLIP1-206ENST00000535290 CRISPLD2Q9H0B8 497 aa10.72□□□□□ -0.69
CLIP1-206ENST00000535290 RAPGEFL1Q9UHV5 662 aa10.72□□□□□ -0.69
CLIP1-206ENST00000535290 POTEB2H3BUK9 544 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 TAF5LO75529 589 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 IL1R1P14778 569 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 FCGRTP55899 365 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 FKBP1AP62942 108 aaKnown RBP10.71□□□□□ -0.69
CLIP1-206ENST00000535290 CHRNDQ07001 517 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 LMOD3Q0VAK6 560 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 PPIL2Q13356 520 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 NECAB2Q7Z6G3 386 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 ANKRD23Q86SG2 305 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 DZIP1LQ8IYY4 767 aaKnown RBP10.71□□□□□ -0.69
CLIP1-206ENST00000535290 FAM161BQ96MY7 647 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 WRNIP1Q96S55 665 aa10.71□□□□□ -0.69
CLIP1-206ENST00000535290 UBE2OQ9C0C9 1292 aaKnown RBP10.71□□□□□ -0.69
CLIP1-206ENST00000535290 PAK6Q9NQU5 681 aaPredicted RBP10.71□□□□□ -0.69
CLIP1-206ENST00000535290 SPTBN5Q9NRC6 3674 aaKnown RBP10.71□□□□□ -0.69
CLIP1-206ENST00000535290 IGKV5-2P06315 115 aa10.7□□□□□ -0.7
CLIP1-206ENST00000535290 BCRP11274 1271 aa10.7□□□□□ -0.7
CLIP1-206ENST00000535290 ITGA6P23229 1130 aa10.7□□□□□ -0.7
CLIP1-206ENST00000535290 FLT3LGP49771 235 aa10.7□□□□□ -0.7
CLIP1-206ENST00000535290 NEUROD2Q15784 382 aa10.7□□□□□ -0.7
CLIP1-206ENST00000535290 C15orf52Q6ZUT6 534 aaKnown RBP10.7□□□□□ -0.7
CLIP1-206ENST00000535290 MPHOSPH8Q99549 860 aa10.7□□□□□ -0.7
CLIP1-206ENST00000535290 CYP2C8P10632 490 aa10.69□□□□□ -0.7
CLIP1-206ENST00000535290 CACNB3P54284 484 aa10.69□□□□□ -0.7
CLIP1-206ENST00000535290 MOGSQ13724 837 aa10.69□□□□□ -0.7
CLIP1-206ENST00000535290 FAM109BQ6ICB4 259 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-206ENST00000535290 PXYLP1Q8TE99 480 aa10.69□□□□□ -0.7
CLIP1-206ENST00000535290 SERPINA10Q9UK55 444 aa10.69□□□□□ -0.7
CLIP1-206ENST00000535290 TTF2Q9UNY4 1162 aaKnown RBP10.69□□□□□ -0.7
CLIP1-206ENST00000535290 CAPN2P17655 700 aa10.68□□□□□ -0.7
CLIP1-206ENST00000535290 INPP5BP32019 993 aa10.68□□□□□ -0.7
CLIP1-206ENST00000535290 TNNI2P48788 182 aa10.68□□□□□ -0.7
CLIP1-206ENST00000535290 PPATQ06203 517 aa10.68□□□□□ -0.7
CLIP1-206ENST00000535290 ZNF804AQ7Z570 1209 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms