RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TSHZ3Q63HK5 1081 aa17.2■□□□□ 0.34
VPS11-205ENST00000534551 SPATA5Q8NB90 893 aa17.2■□□□□ 0.34
VPS11-205ENST00000534551 WDR66Q8TBY9 1149 aa17.2■□□□□ 0.34
VPS11-205ENST00000534551 OTUD7AQ8TE49 926 aaPredicted RBP17.2■□□□□ 0.34
VPS11-205ENST00000534551 ZBED3Q96IU2 234 aaPredicted RBP17.2■□□□□ 0.34
VPS11-205ENST00000534551 SALL1Q9NSC2 1324 aa17.2■□□□□ 0.34
VPS11-205ENST00000534551 CEP350Q5VT06 3117 aa17.19■□□□□ 0.34
VPS11-205ENST00000534551 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
VPS11-205ENST00000534551 ITGBL1O95965 494 aaPredicted RBP17.19■□□□□ 0.34
VPS11-205ENST00000534551 IFIT2P09913 472 aaKnown RBP17.19■□□□□ 0.34
VPS11-205ENST00000534551 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
VPS11-205ENST00000534551 RBM5P52756 815 aaKnown RBP eCLIP17.19■□□□□ 0.34
VPS11-205ENST00000534551 HDAC1Q13547 482 aaPredicted RBP17.19■□□□□ 0.34
VPS11-205ENST00000534551 CCDC158Q5M9N0 1113 aa17.19■□□□□ 0.34
VPS11-205ENST00000534551 ABCF2Q9UG63 623 aa17.19■□□□□ 0.34
VPS11-205ENST00000534551 PDS5AQ29RF7 1337 aaKnown RBP17.19■□□□□ 0.34
VPS11-205ENST00000534551 PASKQ96RG2 1323 aa17.19■□□□□ 0.34
VPS11-205ENST00000534551 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
VPS11-205ENST00000534551 ZAP70P43403 619 aa17.18■□□□□ 0.34
VPS11-205ENST00000534551 DLGAP5Q15398 846 aa17.18■□□□□ 0.34
VPS11-205ENST00000534551 PRMT6Q96LA8 375 aaPredicted RBP17.18■□□□□ 0.34
VPS11-205ENST00000534551 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
VPS11-205ENST00000534551 FOCADQ5VW36 1801 aa17.17■□□□□ 0.34
VPS11-205ENST00000534551 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
VPS11-205ENST00000534551 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
VPS11-205ENST00000534551 USP48Q86UV5 1035 aa17.17■□□□□ 0.34
VPS11-205ENST00000534551 ZNF384Q8TF68 577 aa17.17■□□□□ 0.34
VPS11-205ENST00000534551 EDC3Q96F86 508 aaKnown RBP17.17■□□□□ 0.34
VPS11-205ENST00000534551 ANTXR1Q9H6X2 564 aa17.17■□□□□ 0.34
VPS11-205ENST00000534551 PIH1D3Q9NQM4 214 aaKnown RBP17.17■□□□□ 0.34
VPS11-205ENST00000534551 OTOFQ9HC10 1997 aa17.17■□□□□ 0.34
VPS11-205ENST00000534551 ZBTB22O15209 634 aa17.16■□□□□ 0.34
VPS11-205ENST00000534551 CYP2E1P05181 493 aaPredicted RBP17.16■□□□□ 0.34
VPS11-205ENST00000534551 ZC3H15Q8WU90 426 aaKnown RBP17.16■□□□□ 0.34
VPS11-205ENST00000534551 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
VPS11-205ENST00000534551 AK9Q5TCS8 1911 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 HSPA6P17066 643 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 CACNB3P54284 484 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 AAMPQ13685 434 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 PRAMEF18Q5VWM3 479 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 B4GALNT3Q6L9W6 998 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 DZIP1Q86YF9 867 aaKnown RBP17.15■□□□□ 0.34
VPS11-205ENST00000534551 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 TEKT1Q969V4 418 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 DCPSQ96C86 337 aaKnown RBP17.15■□□□□ 0.34
VPS11-205ENST00000534551 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
VPS11-205ENST00000534551 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
VPS11-205ENST00000534551 TDRD3Q9H7E2 651 aaKnown RBP17.15■□□□□ 0.34
VPS11-205ENST00000534551 ZNF408Q9H9D4 720 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 VEZTQ9HBM0 779 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 SUGT1Q9Y2Z0 365 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 MAST3O60307 1309 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 SSC5DA1L4H1 1573 aa17.15■□□□□ 0.34
VPS11-205ENST00000534551 MECOMQ03112 1051 aa17.14■□□□□ 0.33
VPS11-205ENST00000534551 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
VPS11-205ENST00000534551 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
VPS11-205ENST00000534551 PAPPA2Q9BXP8 1791 aa17.14■□□□□ 0.33
VPS11-205ENST00000534551 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
VPS11-205ENST00000534551 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 APOBEC3HQ6NTF7 200 aaKnown RBP17.13■□□□□ 0.33
VPS11-205ENST00000534551 SULF1Q8IWU6 871 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 CDAN1Q8IWY9 1227 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 SMC5Q8IY18 1101 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 ZGPATQ8N5A5 531 aaKnown RBP17.13■□□□□ 0.33
VPS11-205ENST00000534551 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 RAI14Q9P0K7 980 aa17.13■□□□□ 0.33
VPS11-205ENST00000534551 NAV1Q8NEY1 1877 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 APLP1P51693 650 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 CDC37L1Q7L3B6 337 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 ADGRA1Q86SQ6 560 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 GCC1Q96CN9 775 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 RWDD1Q9H446 243 aaPredicted RBP17.12■□□□□ 0.33
VPS11-205ENST00000534551 ZNF70Q9UC06 446 aaPredicted RBP17.12■□□□□ 0.33
VPS11-205ENST00000534551 GAKO14976 1311 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 SALL3Q9BXA9 1300 aa17.12■□□□□ 0.33
VPS11-205ENST00000534551 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
VPS11-205ENST00000534551 GOLIM4O00461 696 aa17.11■□□□□ 0.33
VPS11-205ENST00000534551 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
VPS11-205ENST00000534551 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
VPS11-205ENST00000534551 CST9Q5W186 159 aa17.11■□□□□ 0.33
VPS11-205ENST00000534551 APOBEC3FQ8IUX4 373 aaKnown RBP17.11■□□□□ 0.33
VPS11-205ENST00000534551 NSUN4Q96CB9 384 aaKnown RBP17.11■□□□□ 0.33
VPS11-205ENST00000534551 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
VPS11-205ENST00000534551 SIPA1L1O43166 1804 aa17.11■□□□□ 0.33
VPS11-205ENST00000534551 MROH7-TTC4A0A0A0MT08 1334 aa17.11■□□□□ 0.33
VPS11-205ENST00000534551 RFX7Q2KHR2 1363 aa17.11■□□□□ 0.33
VPS11-205ENST00000534551 IDH1O75874 414 aaKnown RBP17.1■□□□□ 0.33
VPS11-205ENST00000534551 CHGBP05060 677 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
VPS11-205ENST00000534551 ATP5JP18859 108 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 MMP14P50281 582 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 SLFNL1Q499Z3 407 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 CDC42EP5Q6NZY7 148 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 HHIPL2Q6UWX4 724 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 ECHDC1Q9NTX5 307 aa17.1■□□□□ 0.33
VPS11-205ENST00000534551 FZD1Q9UP38 647 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 414.6 ms