RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-213ENST00000534532 ARMT1Q9H993 441 aa17.85■□□□□ 0.45
NCAPD3-213ENST00000534532 FCHSD1Q86WN1 690 aa17.85■□□□□ 0.45
NCAPD3-213ENST00000534532 SPTLC2O15270 562 aa17.85■□□□□ 0.45
NCAPD3-213ENST00000534532 MCM7P33993 719 aa17.85■□□□□ 0.45
NCAPD3-213ENST00000534532 EHBP1Q8NDI1 1231 aa17.85■□□□□ 0.45
NCAPD3-213ENST00000534532 DHX58Q96C10 678 aa17.85■□□□□ 0.45
NCAPD3-213ENST00000534532 TMEM87BQ96K49 555 aa17.85■□□□□ 0.45
NCAPD3-213ENST00000534532 ZYXQ15942 572 aaKnown RBP17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 ARHGAP27Q6ZUM4 889 aa17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 C2CD5Q86YS7 1000 aa17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 NOP56O00567 594 aaKnown RBP17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 GCKRQ14397 625 aa17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 ZNF594Q96JF6 807 aaPredicted RBP17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 DBNDD2Q9BQY9 259 aa17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 ZKSCAN3Q9BRR0 538 aa17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 YEATS2Q9ULM3 1422 aa17.84■□□□□ 0.45
NCAPD3-213ENST00000534532 SLC1A4P43007 532 aa17.83■□□□□ 0.45
NCAPD3-213ENST00000534532 CCDC117Q8IWD4 279 aaPredicted RBP17.83■□□□□ 0.45
NCAPD3-213ENST00000534532 SMCR8Q8TEV9 937 aaPredicted RBP17.83■□□□□ 0.45
NCAPD3-213ENST00000534532 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.45
NCAPD3-213ENST00000534532 BRAPQ7Z569 592 aa17.83■□□□□ 0.45
NCAPD3-213ENST00000534532 BICDL2A1A5D9 508 aa17.83■□□□□ 0.44
NCAPD3-213ENST00000534532 TSNARE1Q96NA8 513 aa17.83■□□□□ 0.44
NCAPD3-213ENST00000534532 CEP83Q9Y592 693 aa17.83■□□□□ 0.44
NCAPD3-213ENST00000534532 ZBTB40Q9NUA8 1239 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 PKD2L1Q9P0L9 805 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 USP25Q9UHP3 1055 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 CYLC1P35663 651 aaPredicted RBP17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 SLC5A4Q9NY91 659 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 PRPHP41219 470 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 TEKT1Q969V4 418 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 PTPDC1A2A3K4 754 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 CCDC66A2RUB6 948 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 PHKG2P15735 406 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 HLTFQ14527 1009 aaKnown RBP eCLIP17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 TMCO3Q6UWJ1 677 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 AS3MTQ9HBK9 375 aa17.82■□□□□ 0.44
NCAPD3-213ENST00000534532 RPL13P26373 211 aaKnown RBP17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 TCP10Q12799 353 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 SPECC1Q5M775 1068 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 HOMER2Q9NSB8 354 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 ATP2B4P23634 1241 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 DPH6Q7L8W6 267 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 SPATA5Q8NB90 893 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 LETM2Q2VYF4 491 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 DDX12PQ92771 950 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 GOLGA6L10A0A0M3HER8 536 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 SMTNP53814 917 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 IQUBQ8NA54 791 aa17.81■□□□□ 0.44
NCAPD3-213ENST00000534532 NPHP4O75161 1426 aaPredicted RBP17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 FSD2A1L4K1 749 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 B4E1Z4 1266 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 CHMLP26374 656 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 GTF2IP78347 998 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 KIF22Q14807 665 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 KIAA0753Q2KHM9 967 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 DCAF15Q66K64 600 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 RXRAP19793 462 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 UBASH3AP57075 661 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 EIF4A1P60842 406 aaKnown RBP17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 GIGYF2Q6Y7W6 1299 aaKnown RBP17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 RUFY3Q7L099 469 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 MAP2K1Q02750 393 aaPredicted RBP17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 CCDC65Q8IXS2 484 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 STAMBPO95630 424 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 ZSCAN30Q86W11 494 aa17.8■□□□□ 0.44
NCAPD3-213ENST00000534532 GPAA1O43292 621 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 CPXCR1Q8N123 301 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 SPC25Q9HBM1 224 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 TTF2Q9UNY4 1162 aaKnown RBP17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 ESPNB1AK53 854 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 HAUS3Q68CZ6 603 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 AZI2Q9H6S1 392 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 MFSD14BQ5SR56 506 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 NSMFQ6X4W1 530 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 SUCLG2Q96I99 432 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 IFT74Q96LB3 600 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 USP19O94966 1318 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 DEXIO95424 95 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 F13A1P00488 732 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 MYCLP12524 364 aaPredicted RBP17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 PSMD1Q99460 953 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 USP40Q9NVE5 1235 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 STK24Q9Y6E0 443 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 PLCD3Q8N3E9 789 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 KLHDC4Q8TBB5 520 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 IKBKGQ9Y6K9 419 aa17.79■□□□□ 0.44
NCAPD3-213ENST00000534532 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 JADE2Q9NQC1 790 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 AK2P54819 239 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 DCPSQ96C86 337 aaKnown RBP17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 SV2BQ7L1I2 683 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 PLEKHM2Q8IWE5 1019 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 LZTS2Q9BRK4 669 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 LOC102724428A0A0B4J2F2 783 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 PLCD1P51178 756 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 SIK1P57059 783 aa17.78■□□□□ 0.44
NCAPD3-213ENST00000534532 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.446e-7■■□□□ 13.3
NCAPD3-213ENST00000534532 SMC1AQ14683 1233 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms