RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CHMP3Q9Y3E7 222 aa22.17■■□□□ 1.14
SMPD1-210ENST00000534405 SPATA31A3Q5VYP0 1347 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 EFCAB8A8MWE9 144 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 H7C1W4 665 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 CORO7P57737 925 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 GSDMDP57764 484 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 KRT85P78386 507 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 ATG9AQ7Z3C6 839 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 MNS1Q8NEH6 495 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 GOLGA6L19H0YKK7 550 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 JAK2O60674 1132 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 KCNJ6P48051 423 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 SATB1Q01826 763 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 NEK1Q96PY6 1258 aa22.16■■□□□ 1.14
SMPD1-210ENST00000534405 PDCP20941 246 aa22.15■■□□□ 1.14
SMPD1-210ENST00000534405 MCMDC2Q4G0Z9 681 aa22.15■■□□□ 1.14
SMPD1-210ENST00000534405 ZSCAN16Q9H4T2 348 aaPredicted RBP22.15■■□□□ 1.14
SMPD1-210ENST00000534405 RFX7Q2KHR2 1363 aa22.15■■□□□ 1.14
SMPD1-210ENST00000534405 DCCP43146 1447 aa22.15■■□□□ 1.14
SMPD1-210ENST00000534405 MMS22LQ6ZRQ5 1243 aa22.15■■□□□ 1.14
SMPD1-210ENST00000534405 PHLPP2Q6ZVD8 1323 aa22.14■■□□□ 1.14
SMPD1-210ENST00000534405 A1BGP04217 495 aa22.14■■□□□ 1.13
SMPD1-210ENST00000534405 KRT32Q14532 448 aa22.14■■□□□ 1.13
SMPD1-210ENST00000534405 Q6ZUG5 572 aa22.14■■□□□ 1.13
SMPD1-210ENST00000534405 STOX1Q6ZVD7 989 aa22.14■■□□□ 1.13
SMPD1-210ENST00000534405 KBTBD3Q8NAB2 608 aa22.14■■□□□ 1.13
SMPD1-210ENST00000534405 LRRC2Q9BYS8 371 aa22.14■■□□□ 1.13
SMPD1-210ENST00000534405 TFIP11Q9UBB9 837 aaKnown RBP22.14■■□□□ 1.13
SMPD1-210ENST00000534405 CPDO75976 1380 aa22.13■■□□□ 1.13
SMPD1-210ENST00000534405 TIMM10P62072 90 aa22.13■■□□□ 1.13
SMPD1-210ENST00000534405 CCDC34Q96HJ3 373 aa22.13■■□□□ 1.13
SMPD1-210ENST00000534405 OSBPL5Q9H0X9 879 aaPredicted RBP22.13■■□□□ 1.13
SMPD1-210ENST00000534405 U3KPZ7 1027 aaPredicted RBP22.13■■□□□ 1.13
SMPD1-210ENST00000534405 E2F4Q16254 413 aa22.12■■□□□ 1.13
SMPD1-210ENST00000534405 NEUROD6Q96NK8 337 aa22.12■■□□□ 1.13
SMPD1-210ENST00000534405 SUFUQ9UMX1 484 aa22.12■■□□□ 1.13
SMPD1-210ENST00000534405 PARP4Q9UKK3 1724 aaKnown RBP22.12■■□□□ 1.13
SMPD1-210ENST00000534405 FUT8Q9BYC5 575 aa22.12■■□□□ 1.13
SMPD1-210ENST00000534405 TJP1Q07157 1748 aa22.12■■□□□ 1.13
SMPD1-210ENST00000534405 GOLIM4O00461 696 aa22.11■■□□□ 1.13
SMPD1-210ENST00000534405 CADPS2Q86UW7 1296 aa22.11■■□□□ 1.13
SMPD1-210ENST00000534405 LRRC24Q50LG9 513 aa22.11■■□□□ 1.13
SMPD1-210ENST00000534405 SAMD1Q6SPF0 538 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-210ENST00000534405 ZNF594Q96JF6 807 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-210ENST00000534405 ZBTB3Q9H5J0 574 aa22.11■■□□□ 1.13
SMPD1-210ENST00000534405 CWC25Q9NXE8 425 aaPredicted RBP22.11■■□□□ 1.13
SMPD1-210ENST00000534405 MKRN1Q9UHC7 482 aaKnown RBP22.11■■□□□ 1.13
SMPD1-210ENST00000534405 NUP188Q5SRE5 1749 aa22.1■■□□□ 1.13
SMPD1-210ENST00000534405 A0A0G2JLW4 131 aa22.1■■□□□ 1.13
SMPD1-210ENST00000534405 ARFGAP3Q9NP61 516 aa22.1■■□□□ 1.13
SMPD1-210ENST00000534405 IMPACTQ9P2X3 320 aa22.1■■□□□ 1.13
SMPD1-210ENST00000534405 SH3TC1Q8TE82 1336 aa22.1■■□□□ 1.13
SMPD1-210ENST00000534405 H3BQF6 201 aa22.1■■□□□ 1.13
SMPD1-210ENST00000534405 ETF1P62495 437 aaKnown RBP22.1■■□□□ 1.13
SMPD1-210ENST00000534405 GPR161Q8N6U8 529 aaKnown RBP22.1■■□□□ 1.13
SMPD1-210ENST00000534405 ATP6V1AP38606 617 aa22.09■■□□□ 1.13
SMPD1-210ENST00000534405 GORABQ5T7V8 394 aa22.09■■□□□ 1.13
SMPD1-210ENST00000534405 ZCRB1Q8TBF4 217 aaKnown RBP22.09■■□□□ 1.13
SMPD1-210ENST00000534405 LEO1Q8WVC0 666 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-210ENST00000534405 BRF1Q92994 677 aa22.09■■□□□ 1.13
SMPD1-210ENST00000534405 PAG1Q9NWQ8 432 aa22.09■■□□□ 1.13
SMPD1-210ENST00000534405 PALLDQ8WX93 1383 aa22.09■■□□□ 1.13
SMPD1-210ENST00000534405 LRRFIP1Q32MZ4 808 aaKnown RBP22.09■■□□□ 1.13
SMPD1-210ENST00000534405 DDX11Q96FC9 970 aa22.09■■□□□ 1.13
SMPD1-210ENST00000534405 KCPQ6ZWJ8 1503 aa22.08■■□□□ 1.13
SMPD1-210ENST00000534405 SCRN1Q12765 414 aa22.08■■□□□ 1.13
SMPD1-210ENST00000534405 EFCAB13Q8IY85 973 aa22.08■■□□□ 1.13
SMPD1-210ENST00000534405 SPATA32Q96LK8 384 aa22.08■■□□□ 1.13
SMPD1-210ENST00000534405 SCAND2PQ9GZW5 306 aaPredicted RBP22.08■■□□□ 1.13
SMPD1-210ENST00000534405 DNAI1Q9UI46 699 aa22.08■■□□□ 1.13
SMPD1-210ENST00000534405 GOLGA6L4A6NEF3 574 aa22.08■■□□□ 1.12
SMPD1-210ENST00000534405 HSP90B1P14625 803 aaKnown RBP22.08■■□□□ 1.12
SMPD1-210ENST00000534405 MAP2K2P36507 400 aa22.08■■□□□ 1.12
SMPD1-210ENST00000534405 EVCP57679 992 aa22.08■■□□□ 1.12
SMPD1-210ENST00000534405 FOXR1Q6PIV2 292 aa22.08■■□□□ 1.12
SMPD1-210ENST00000534405 EGFL6Q8IUX8 553 aa22.08■■□□□ 1.12
SMPD1-210ENST00000534405 LAMA4Q16363 1823 aa22.08■■□□□ 1.12
SMPD1-210ENST00000534405 UBR2Q8IWV8 1755 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 RESTQ13127 1097 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 TOM1L2Q6ZVM7 507 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 RPAINQ86UA6 219 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 ANKRD20A12PQ8NF67 263 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 PUS3Q9BZE2 481 aaKnown RBP22.07■■□□□ 1.12
SMPD1-210ENST00000534405 WDR17Q8IZU2 1322 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 CCDC196A0A1B0GTZ2 297 aa22.07■■□□□ 1.12
SMPD1-210ENST00000534405 SYTL4Q96C24 671 aaPredicted RBP22.07■■□□□ 1.12
SMPD1-210ENST00000534405 MAP2K7O14733 419 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 NR1I2O75469 434 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 IL15P40933 162 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-210ENST00000534405 C11orf57Q6ZUT1 292 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-210ENST00000534405 CCDC150Q8NCX0 1101 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 PGBD1Q96JS3 809 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 CARD6Q9BX69 1037 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 EYA2O00167 538 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 PRDM11Q9NQV5 511 aa22.06■■□□□ 1.12
SMPD1-210ENST00000534405 ZMYM1Q5SVZ6 1142 aa22.05■■□□□ 1.12
SMPD1-210ENST00000534405 CCP110O43303 1012 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms